RNA–Protein interactions for RNA: ENST00000467288.6

GMDS-203, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-203ENST00000467288 HOXB2P14652 356 aa20.23■□□□□ 0.83
GMDS-203ENST00000467288 HOXD9P28356 352 aaPredicted RBP20.23■□□□□ 0.83
GMDS-203ENST00000467288 WASP42768 502 aa20.23■□□□□ 0.83
GMDS-203ENST00000467288 DRAP1Q14919 205 aaPredicted RBP20.23■□□□□ 0.83
GMDS-203ENST00000467288 CSRP2Q16527 193 aa20.23■□□□□ 0.83
GMDS-203ENST00000467288 SYPL2Q5VXT5 272 aa20.23■□□□□ 0.83
GMDS-203ENST00000467288 C11orf74Q86VG3 221 aa20.23■□□□□ 0.83
GMDS-203ENST00000467288 SLC47A2Q86VL8 602 aa20.23■□□□□ 0.83
GMDS-203ENST00000467288 CHPFQ8IZ52 775 aa20.23■□□□□ 0.83
GMDS-203ENST00000467288 SLC39A13Q96H72 371 aa20.23■□□□□ 0.83
GMDS-203ENST00000467288 FCRL2Q96LA5 508 aaPredicted RBP20.23■□□□□ 0.83
GMDS-203ENST00000467288 SERPINB11Q96P15 392 aa20.23■□□□□ 0.83
GMDS-203ENST00000467288 CPXM1Q96SM3 734 aa20.23■□□□□ 0.83
GMDS-203ENST00000467288 GABRG3Q99928 467 aa20.23■□□□□ 0.83
GMDS-203ENST00000467288 CD248Q9HCU0 757 aa20.23■□□□□ 0.83
GMDS-203ENST00000467288 TCRBV21S2A2A0A5A6 115 aa20.22■□□□□ 0.83
GMDS-203ENST00000467288 ACSL4O60488 711 aa20.22■□□□□ 0.83
GMDS-203ENST00000467288 TSPAN3O60637 253 aa20.22■□□□□ 0.83
GMDS-203ENST00000467288 UCHL3P15374 230 aa20.22■□□□□ 0.83
GMDS-203ENST00000467288 BPIFB4P59827 614 aa20.22■□□□□ 0.83
GMDS-203ENST00000467288 YWHAZP63104 245 aaKnown RBP20.22■□□□□ 0.83
GMDS-203ENST00000467288 KRT31Q15323 416 aa20.22■□□□□ 0.83
GMDS-203ENST00000467288 STX1AQ16623 288 aa20.22■□□□□ 0.83
GMDS-203ENST00000467288 CCDC183Q5T5S1 534 aa20.22■□□□□ 0.83
GMDS-203ENST00000467288 SDE2Q6IQ49 451 aa20.22■□□□□ 0.83
GMDS-203ENST00000467288 PASD1Q8IV76 773 aa20.22■□□□□ 0.83
GMDS-203ENST00000467288 NETO1Q8TDF5 533 aa20.22■□□□□ 0.83
GMDS-203ENST00000467288 TMA16Q96EY4 203 aaKnown RBP20.22■□□□□ 0.83
GMDS-203ENST00000467288 PPP1R13BQ96KQ4 1090 aa20.22■□□□□ 0.83
GMDS-203ENST00000467288 LSM14BQ9BX40 385 aaKnown RBP20.22■□□□□ 0.83
GMDS-203ENST00000467288 VPS16Q9H269 839 aa20.22■□□□□ 0.83
GMDS-203ENST00000467288 POPDC2Q9HBU9 364 aa20.22■□□□□ 0.83
GMDS-203ENST00000467288 PLCB1Q9NQ66 1216 aa20.22■□□□□ 0.83
GMDS-203ENST00000467288 FANCLQ9NW38 375 aa20.22■□□□□ 0.83
GMDS-203ENST00000467288 INVSQ9Y283 1065 aa20.22■□□□□ 0.83
GMDS-203ENST00000467288 TLR6Q9Y2C9 796 aa20.22■□□□□ 0.83
GMDS-203ENST00000467288 ACACBO00763 2458 aa20.21■□□□□ 0.83
GMDS-203ENST00000467288 CAPN9O14815 690 aa20.21■□□□□ 0.83
GMDS-203ENST00000467288 SLC30A4O14863 429 aa20.21■□□□□ 0.83
GMDS-203ENST00000467288 GDF9O60383 454 aa20.21■□□□□ 0.83
GMDS-203ENST00000467288 IGLV3-25P01717 112 aa20.21■□□□□ 0.83
GMDS-203ENST00000467288 GLI1P08151 1106 aa20.21■□□□□ 0.83
GMDS-203ENST00000467288 KRT9P35527 623 aa20.21■□□□□ 0.83
GMDS-203ENST00000467288 P2RY2P41231 377 aa20.21■□□□□ 0.83
GMDS-203ENST00000467288 SLC11A2P49281 568 aa20.21■□□□□ 0.83
GMDS-203ENST00000467288 RAPGEF1Q13905 1077 aa20.21■□□□□ 0.83
GMDS-203ENST00000467288 ELF2Q15723 593 aa20.21■□□□□ 0.83
GMDS-203ENST00000467288 FAM133BQ5BKY9 247 aaKnown RBP20.21■□□□□ 0.83
GMDS-203ENST00000467288 RNF43Q68DV7 783 aa20.21■□□□□ 0.83
GMDS-203ENST00000467288 PRR23CQ6ZRP0 262 aa20.21■□□□□ 0.83
GMDS-203ENST00000467288 ANKS1BQ7Z6G8 1248 aa20.21■□□□□ 0.83
GMDS-203ENST00000467288 TAC4Q86UU9 113 aa20.21■□□□□ 0.83
GMDS-203ENST00000467288 C1orf131Q8NDD1 294 aaKnown RBP20.21■□□□□ 0.83
GMDS-203ENST00000467288 HMGB4Q8WW32 186 aa20.21■□□□□ 0.83
GMDS-203ENST00000467288 NOX5Q96PH1 765 aa20.21■□□□□ 0.83
GMDS-203ENST00000467288 ARRDC1-AS1Q9H2J1 176 aa20.21■□□□□ 0.83
GMDS-203ENST00000467288 ASNSD1Q9NWL6 643 aa20.21■□□□□ 0.83
GMDS-203ENST00000467288 THAP10Q9P2Z0 257 aaPredicted RBP20.21■□□□□ 0.83
GMDS-203ENST00000467288 PCDHGA5Q9Y5G8 931 aa20.21■□□□□ 0.83
GMDS-203ENST00000467288 NPC1O15118 1278 aa20.2■□□□□ 0.82
GMDS-203ENST00000467288 IRAK2O43187 625 aa20.2■□□□□ 0.82
GMDS-203ENST00000467288 RHOBTB1O94844 696 aa20.2■□□□□ 0.82
GMDS-203ENST00000467288 GABRG2P18507 467 aa20.2■□□□□ 0.82
GMDS-203ENST00000467288 BCKDHBP21953 392 aa20.2■□□□□ 0.82
GMDS-203ENST00000467288 SLC6A4P31645 630 aa20.2■□□□□ 0.82
GMDS-203ENST00000467288 SGSHP51688 502 aa20.2■□□□□ 0.82
GMDS-203ENST00000467288 MYL5Q02045 173 aa20.2■□□□□ 0.82
GMDS-203ENST00000467288 EIF4EBP2Q13542 120 aaPredicted RBP20.2■□□□□ 0.82
GMDS-203ENST00000467288 ENPP2Q13822 863 aa20.2■□□□□ 0.82
GMDS-203ENST00000467288 EIF4HQ15056 248 aaKnown RBP20.2■□□□□ 0.82
GMDS-203ENST00000467288 TAF5Q15542 800 aa20.2■□□□□ 0.82
GMDS-203ENST00000467288 MPP7Q5T2T1 576 aa20.2■□□□□ 0.82
GMDS-203ENST00000467288 PIK3R6Q5UE93 754 aa20.2■□□□□ 0.82
GMDS-203ENST00000467288 NADSYN1Q6IA69 706 aa20.2■□□□□ 0.82
GMDS-203ENST00000467288 ADAM32Q8TC27 787 aa20.2■□□□□ 0.82
GMDS-203ENST00000467288 IPO4Q8TEX9 1081 aaKnown RBP20.2■□□□□ 0.82
GMDS-203ENST00000467288 STK33Q9BYT3 514 aa20.2■□□□□ 0.82
GMDS-203ENST00000467288 GANQ9H2C0 597 aa20.2■□□□□ 0.82
GMDS-203ENST00000467288 ELOVL2Q9NXB9 296 aa20.2■□□□□ 0.82
GMDS-203ENST00000467288 CACNA2D2Q9NY47 1150 aa20.2■□□□□ 0.82
GMDS-203ENST00000467288 BCCIPQ9P287 314 aaKnown RBP eCLIP20.2■□□□□ 0.82
GMDS-203ENST00000467288 STON1Q9Y6Q2 735 aa20.2■□□□□ 0.82
GMDS-203ENST00000467288 SPAG17Q6Q759 2223 aa20.2■□□□□ 0.82
GMDS-203ENST00000467288 GOLGA6L7A0A1B0GV03 622 aa20.19■□□□□ 0.82
GMDS-203ENST00000467288 CYP11B1P15538 503 aa20.19■□□□□ 0.82
GMDS-203ENST00000467288 GBP1P32455 592 aa20.19■□□□□ 0.82
GMDS-203ENST00000467288 CDH5P33151 784 aaPredicted RBP20.19■□□□□ 0.82
GMDS-203ENST00000467288 MAP7D1Q3KQU3 841 aa20.19■□□□□ 0.82
GMDS-203ENST00000467288 EFHC1Q5JVL4 640 aa20.19■□□□□ 0.82
GMDS-203ENST00000467288 PMS2CLQ68D20 193 aa20.19■□□□□ 0.82
GMDS-203ENST00000467288 TMEM215Q68D42 235 aa20.19■□□□□ 0.82
GMDS-203ENST00000467288 KIAA1211LQ6NV74 962 aa20.19■□□□□ 0.82
GMDS-203ENST00000467288 RFWD3Q6PCD5 774 aa20.19■□□□□ 0.82
GMDS-203ENST00000467288 KIAA0907Q7Z7F0 614 aaPredicted RBP20.19■□□□□ 0.82
GMDS-203ENST00000467288 PGBD3Q8N328 593 aa20.19■□□□□ 0.82
GMDS-203ENST00000467288 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.19■□□□□ 0.82
GMDS-203ENST00000467288 UCMAQ8WVF2 138 aa20.19■□□□□ 0.82
GMDS-203ENST00000467288 RLN3Q8WXF3 142 aa20.19■□□□□ 0.82
GMDS-203ENST00000467288 SLC2A13Q96QE2 648 aa20.19■□□□□ 0.82
GMDS-203ENST00000467288 DDX50Q9BQ39 737 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms