RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 COL4A3Q01955 1670 aa15.77■□□□□ 0.12
NPHP4-205ENST00000466897 KLKB1P03952 638 aa15.77■□□□□ 0.12
NPHP4-205ENST00000466897 SLC11A2P49281 568 aa15.77■□□□□ 0.12
NPHP4-205ENST00000466897 ARHGAP29Q52LW3 1261 aa15.77■□□□□ 0.12
NPHP4-205ENST00000466897 ZC3H12AQ5D1E8 599 aaKnown RBP15.77■□□□□ 0.12
NPHP4-205ENST00000466897 SH3PXD2AQ5TCZ1 1133 aa15.77■□□□□ 0.12
NPHP4-205ENST00000466897 PSTKQ8IV42 348 aaKnown RBP15.77■□□□□ 0.12
NPHP4-205ENST00000466897 CPXM2Q8N436 756 aa15.77■□□□□ 0.12
NPHP4-205ENST00000466897 ARFGAP1Q8N6T3 406 aa15.77■□□□□ 0.12
NPHP4-205ENST00000466897 ATP6V0D2Q8N8Y2 350 aa15.77■□□□□ 0.12
NPHP4-205ENST00000466897 OSCP1Q8WVF1 389 aa15.77■□□□□ 0.12
NPHP4-205ENST00000466897 BTBD6Q96KE9 485 aa15.77■□□□□ 0.12
NPHP4-205ENST00000466897 LRRC3BQ96PB8 259 aa15.77■□□□□ 0.12
NPHP4-205ENST00000466897 HAPLN3Q96S86 360 aa15.77■□□□□ 0.12
NPHP4-205ENST00000466897 KCNK12Q9HB15 430 aa15.77■□□□□ 0.12
NPHP4-205ENST00000466897 THG1LQ9NWX6 298 aaKnown RBP15.77■□□□□ 0.12
NPHP4-205ENST00000466897 KIAA1549LQ6ZVL6 1849 aa15.77■□□□□ 0.11
NPHP4-205ENST00000466897 A0A0U1RQJ8 604 aa15.76■□□□□ 0.11
NPHP4-205ENST00000466897 GOLGA6L9A6NEM1 432 aa15.76■□□□□ 0.11
NPHP4-205ENST00000466897 CHADO15335 359 aa15.76■□□□□ 0.11
NPHP4-205ENST00000466897 BUB1BO60566 1050 aaPredicted RBP15.76■□□□□ 0.11
NPHP4-205ENST00000466897 HMBSP08397 361 aa15.76■□□□□ 0.11
NPHP4-205ENST00000466897 IRF1P10914 325 aa15.76■□□□□ 0.11
NPHP4-205ENST00000466897 SP100P23497 879 aaPredicted RBP15.76■□□□□ 0.11
NPHP4-205ENST00000466897 ATXN1P54253 815 aaKnown RBP15.76■□□□□ 0.11
NPHP4-205ENST00000466897 MESDQ14696 234 aa15.76■□□□□ 0.11
NPHP4-205ENST00000466897 PDGFRLQ15198 375 aa15.76■□□□□ 0.11
NPHP4-205ENST00000466897 ARL13BQ3SXY8 428 aa15.76■□□□□ 0.11
NPHP4-205ENST00000466897 ADGRF1Q5T601 910 aa15.76■□□□□ 0.11
NPHP4-205ENST00000466897 CC2D1AQ6P1N0 951 aaPredicted RBP15.76■□□□□ 0.11
NPHP4-205ENST00000466897 FAM131BQ86XD5 332 aa15.76■□□□□ 0.11
NPHP4-205ENST00000466897 ATRIPQ8WXE1 791 aa15.76■□□□□ 0.11
NPHP4-205ENST00000466897 RNF34Q969K3 372 aa15.76■□□□□ 0.11
NPHP4-205ENST00000466897 C1orf74Q96LT6 269 aa15.76■□□□□ 0.11
NPHP4-205ENST00000466897 KXD1Q9BQD3 176 aa15.76■□□□□ 0.11
NPHP4-205ENST00000466897 TKTL2Q9H0I9 626 aa15.76■□□□□ 0.11
NPHP4-205ENST00000466897 TRPV5Q9NQA5 729 aa15.76■□□□□ 0.11
NPHP4-205ENST00000466897 TRIM10Q9UDY6 481 aa15.76■□□□□ 0.11
NPHP4-205ENST00000466897 AGO1Q9UL18 857 aaKnown RBP15.76■□□□□ 0.11
NPHP4-205ENST00000466897 UNC80Q8N2C7 3258 aa15.76■□□□□ 0.11
NPHP4-205ENST00000466897 SYNJ2BP-COX16A0A087WUM0 186 aa15.75■□□□□ 0.11
NPHP4-205ENST00000466897 GFRA2O00451 464 aa15.75■□□□□ 0.11
NPHP4-205ENST00000466897 PRPSAP2O60256 369 aa15.75■□□□□ 0.11
NPHP4-205ENST00000466897 ACSL4O60488 711 aa15.75■□□□□ 0.11
NPHP4-205ENST00000466897 MIPP30301 263 aa15.75■□□□□ 0.11
NPHP4-205ENST00000466897 ADRA1BP35368 520 aa15.75■□□□□ 0.11
NPHP4-205ENST00000466897 CHKAP35790 457 aa15.75■□□□□ 0.11
NPHP4-205ENST00000466897 NRG1Q02297 640 aaPredicted RBP15.75■□□□□ 0.11
NPHP4-205ENST00000466897 SLC25A11Q02978 314 aaKnown RBP15.75■□□□□ 0.11
NPHP4-205ENST00000466897 RAB6CQ53S08 254 aa15.75■□□□□ 0.11
NPHP4-205ENST00000466897 CYP4V2Q6ZWL3 525 aaPredicted RBP15.75■□□□□ 0.11
NPHP4-205ENST00000466897 POLNQ7Z5Q5 900 aa15.75■□□□□ 0.11
NPHP4-205ENST00000466897 SLFN11Q7Z7L1 901 aa15.75■□□□□ 0.11
NPHP4-205ENST00000466897 DENND1CQ8IV53 801 aa15.75■□□□□ 0.11
NPHP4-205ENST00000466897 SYCE1Q8N0S2 351 aa15.75■□□□□ 0.11
NPHP4-205ENST00000466897 LRRC57Q8N9N7 239 aa15.75■□□□□ 0.11
NPHP4-205ENST00000466897 TEKT4Q8WW24 435 aa15.75■□□□□ 0.11
NPHP4-205ENST00000466897 WBP2Q969T9 261 aa15.75■□□□□ 0.11
NPHP4-205ENST00000466897 DDX50Q9BQ39 737 aaKnown RBP15.75■□□□□ 0.11
NPHP4-205ENST00000466897 FAM83CQ9BQN1 747 aa15.75■□□□□ 0.11
NPHP4-205ENST00000466897 TRMT61BQ9BVS5 477 aaKnown RBP15.75■□□□□ 0.11
NPHP4-205ENST00000466897 PLA2G2FQ9BZM2 168 aa15.75■□□□□ 0.11
NPHP4-205ENST00000466897 RAB6CQ9H0N0 254 aa15.75■□□□□ 0.11
NPHP4-205ENST00000466897 OSBPL2Q9H1P3 480 aa15.75■□□□□ 0.11
NPHP4-205ENST00000466897 COX16Q9P0S2 106 aa15.75■□□□□ 0.11
NPHP4-205ENST00000466897 LIMD1Q9UGP4 676 aa15.75■□□□□ 0.11
NPHP4-205ENST00000466897 PYCARDQ9ULZ3 195 aa15.75■□□□□ 0.11
NPHP4-205ENST00000466897 USP18Q9UMW8 372 aa15.75■□□□□ 0.11
NPHP4-205ENST00000466897 MYOFQ9NZM1 2061 aa15.74■□□□□ 0.11
NPHP4-205ENST00000466897 MACROD2A1Z1Q3 448 aa15.74■□□□□ 0.11
NPHP4-205ENST00000466897 GRID2IPA4D2P6 1211 aa15.74■□□□□ 0.11
NPHP4-205ENST00000466897 I6L893 689 aaPredicted RBP15.74■□□□□ 0.11
NPHP4-205ENST00000466897 ARNTLO00327 626 aa15.74■□□□□ 0.11
NPHP4-205ENST00000466897 BUB1O43683 1085 aa15.74■□□□□ 0.11
NPHP4-205ENST00000466897 HADHQ16836 314 aaKnown RBP15.74■□□□□ 0.11
NPHP4-205ENST00000466897 BOLA3Q53S33 107 aa15.74■□□□□ 0.11
NPHP4-205ENST00000466897 FAM133BQ5BKY9 247 aaKnown RBP15.74■□□□□ 0.11
NPHP4-205ENST00000466897 LRRC38Q5VT99 294 aa15.74■□□□□ 0.11
NPHP4-205ENST00000466897 DAAM2Q86T65 1068 aa15.74■□□□□ 0.11
NPHP4-205ENST00000466897 BBS7Q8IWZ6 715 aa15.74■□□□□ 0.11
NPHP4-205ENST00000466897 REXO1L1PQ8IX06 675 aa15.74■□□□□ 0.11
NPHP4-205ENST00000466897 YAF2Q8IY57 180 aa15.74■□□□□ 0.11
NPHP4-205ENST00000466897 SLC44A3Q8N4M1 653 aa15.74■□□□□ 0.11
NPHP4-205ENST00000466897 CCDC185Q8N715 623 aa15.74■□□□□ 0.11
NPHP4-205ENST00000466897 ATP2A3Q93084 1043 aa15.74■□□□□ 0.11
NPHP4-205ENST00000466897 PRMT1Q99873 361 aaKnown RBP15.74■□□□□ 0.11
NPHP4-205ENST00000466897 RPP25Q9BUL9 199 aaKnown RBP15.74■□□□□ 0.11
NPHP4-205ENST00000466897 LZTFL1Q9NQ48 299 aa15.74■□□□□ 0.11
NPHP4-205ENST00000466897 ANLNQ9NQW6 1124 aa15.74■□□□□ 0.11
NPHP4-205ENST00000466897 DUS2Q9NX74 493 aaKnown RBP15.74■□□□□ 0.11
NPHP4-205ENST00000466897 FZD10Q9ULW2 581 aa15.74■□□□□ 0.11
NPHP4-205ENST00000466897 GUCA1BQ9UMX6 200 aa15.74■□□□□ 0.11
NPHP4-205ENST00000466897 ALG6Q9Y672 507 aa15.74■□□□□ 0.11
NPHP4-205ENST00000466897 MIA3Q5JRA6 1907 aa15.74■□□□□ 0.11
NPHP4-205ENST00000466897 CHD5Q8TDI0 1954 aa15.73■□□□□ 0.11
NPHP4-205ENST00000466897 PAGE1O75459 146 aa15.73■□□□□ 0.11
NPHP4-205ENST00000466897 NFATC1O95644 943 aa15.73■□□□□ 0.11
NPHP4-205ENST00000466897 KRT7P08729 469 aa15.73■□□□□ 0.11
NPHP4-205ENST00000466897 COMTP21964 271 aa15.73■□□□□ 0.11
NPHP4-205ENST00000466897 HTR7P34969 479 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms