RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 DUS2Q9NX74 493 aaKnown RBP16.62■□□□□ 0.25
GPC1-207ENST00000466624 ARHGEF38Q9NXL2 777 aa16.62■□□□□ 0.25
GPC1-207ENST00000466624 SLC12A6Q9UHW9 1150 aa16.62■□□□□ 0.25
GPC1-207ENST00000466624 AGO1Q9UL18 857 aaKnown RBP16.62■□□□□ 0.25
GPC1-207ENST00000466624 DUSP12Q9UNI6 340 aa16.62■□□□□ 0.25
GPC1-207ENST00000466624 ADGRG1Q9Y653 693 aa16.62■□□□□ 0.25
GPC1-207ENST00000466624 SYNJ2BP-COX16A0A087WUM0 186 aa16.61■□□□□ 0.25
GPC1-207ENST00000466624 ARNTLO00327 626 aa16.61■□□□□ 0.25
GPC1-207ENST00000466624 RNF8O76064 485 aa16.61■□□□□ 0.25
GPC1-207ENST00000466624 SRFP11831 508 aa16.61■□□□□ 0.25
GPC1-207ENST00000466624 GDI1P31150 447 aa16.61■□□□□ 0.25
GPC1-207ENST00000466624 CHKAP35790 457 aa16.61■□□□□ 0.25
GPC1-207ENST00000466624 ARHGAP25P42331 645 aa16.61■□□□□ 0.25
GPC1-207ENST00000466624 AIF1P55008 147 aa16.61■□□□□ 0.25
GPC1-207ENST00000466624 PFKPQ01813 784 aa16.61■□□□□ 0.25
GPC1-207ENST00000466624 EML3Q32P44 896 aa16.61■□□□□ 0.25
GPC1-207ENST00000466624 KIAA1328Q86T90 577 aa16.61■□□□□ 0.25
GPC1-207ENST00000466624 DENND1CQ8IV53 801 aa16.61■□□□□ 0.25
GPC1-207ENST00000466624 BBS7Q8IWZ6 715 aa16.61■□□□□ 0.25
GPC1-207ENST00000466624 ATP2A3Q93084 1043 aa16.61■□□□□ 0.25
GPC1-207ENST00000466624 RNF34Q969K3 372 aa16.61■□□□□ 0.25
GPC1-207ENST00000466624 NTAN1Q96AB6 310 aa16.61■□□□□ 0.25
GPC1-207ENST00000466624 ASIC4Q96FT7 647 aa16.61■□□□□ 0.25
GPC1-207ENST00000466624 UHRF1Q96T88 793 aaPredicted RBP16.61■□□□□ 0.25
GPC1-207ENST00000466624 DDX50Q9BQ39 737 aaKnown RBP16.61■□□□□ 0.25
GPC1-207ENST00000466624 DESI2Q9BSY9 194 aa16.61■□□□□ 0.25
GPC1-207ENST00000466624 BRD9Q9H8M2 597 aa16.61■□□□□ 0.25
GPC1-207ENST00000466624 OSGEPQ9NPF4 335 aa16.61■□□□□ 0.25
GPC1-207ENST00000466624 COX16Q9P0S2 106 aa16.61■□□□□ 0.25
GPC1-207ENST00000466624 WNT6Q9Y6F9 365 aa16.61■□□□□ 0.25
GPC1-207ENST00000466624 NCOR1O75376 2440 aa16.61■□□□□ 0.25
GPC1-207ENST00000466624 COL4A3Q01955 1670 aa16.6■□□□□ 0.25
GPC1-207ENST00000466624 ACSL4O60488 711 aa16.6■□□□□ 0.25
GPC1-207ENST00000466624 NFATC1O95644 943 aa16.6■□□□□ 0.25
GPC1-207ENST00000466624 MAN1A1P33908 653 aa16.6■□□□□ 0.25
GPC1-207ENST00000466624 PCK1P35558 622 aa16.6■□□□□ 0.25
GPC1-207ENST00000466624 KIF5AQ12840 1032 aa16.6■□□□□ 0.25
GPC1-207ENST00000466624 ADGRF1Q5T601 910 aa16.6■□□□□ 0.25
GPC1-207ENST00000466624 SH3PXD2AQ5TCZ1 1133 aa16.6■□□□□ 0.25
GPC1-207ENST00000466624 UBALD2Q8IYN6 164 aa16.6■□□□□ 0.25
GPC1-207ENST00000466624 ADGRG2Q8IZP9 1017 aa16.6■□□□□ 0.25
GPC1-207ENST00000466624 TTC16Q8NEE8 873 aa16.6■□□□□ 0.25
GPC1-207ENST00000466624 LINC00597Q9H2U6 94 aa16.6■□□□□ 0.25
GPC1-207ENST00000466624 KCNF1Q9H3M0 494 aa16.6■□□□□ 0.25
GPC1-207ENST00000466624 CD320Q9NPF0 282 aa16.6■□□□□ 0.25
GPC1-207ENST00000466624 MYOFQ9NZM1 2061 aa16.59■□□□□ 0.25
GPC1-207ENST00000466624 RCCD1A6NED2 376 aa16.59■□□□□ 0.25
GPC1-207ENST00000466624 GFRA2O00451 464 aa16.59■□□□□ 0.25
GPC1-207ENST00000466624 LRCH4O75427 683 aa16.59■□□□□ 0.25
GPC1-207ENST00000466624 PROSCO94903 275 aa16.59■□□□□ 0.25
GPC1-207ENST00000466624 CCDC175P0C221 793 aa16.59■□□□□ 0.25
GPC1-207ENST00000466624 ATXN1P54253 815 aaKnown RBP16.59■□□□□ 0.25
GPC1-207ENST00000466624 MLLT6P55198 1093 aaPredicted RBP16.59■□□□□ 0.25
GPC1-207ENST00000466624 SCAPQ12770 1279 aa16.59■□□□□ 0.25
GPC1-207ENST00000466624 RUNX3Q13761 415 aa16.59■□□□□ 0.25
GPC1-207ENST00000466624 ARL13BQ3SXY8 428 aa16.59■□□□□ 0.25
GPC1-207ENST00000466624 ZNF662Q6ZS27 426 aa16.59■□□□□ 0.25
GPC1-207ENST00000466624 FAM131BQ86XD5 332 aa16.59■□□□□ 0.25
GPC1-207ENST00000466624 CPA6Q8N4T0 437 aa16.59■□□□□ 0.25
GPC1-207ENST00000466624 ZFYVE19Q96K21 471 aa16.59■□□□□ 0.25
GPC1-207ENST00000466624 NECAB3Q96P71 396 aaPredicted RBP16.59■□□□□ 0.25
GPC1-207ENST00000466624 HAPLN3Q96S86 360 aa16.59■□□□□ 0.25
GPC1-207ENST00000466624 TSGA10Q9BZW7 698 aa16.59■□□□□ 0.25
GPC1-207ENST00000466624 LACRTQ9GZZ8 138 aa16.59■□□□□ 0.25
GPC1-207ENST00000466624 TKTL2Q9H0I9 626 aa16.59■□□□□ 0.25
GPC1-207ENST00000466624 HPS4Q9NQG7 708 aa16.59■□□□□ 0.25
GPC1-207ENST00000466624 MARK1Q9P0L2 795 aa16.59■□□□□ 0.25
GPC1-207ENST00000466624 MOCS2O96007 188 aaPredicted RBP16.58■□□□□ 0.24
GPC1-207ENST00000466624 ADRA1BP35368 520 aa16.58■□□□□ 0.24
GPC1-207ENST00000466624 NR1H3Q13133 447 aa16.58■□□□□ 0.24
GPC1-207ENST00000466624 ITPRIPL2Q3MIP1 535 aa16.58■□□□□ 0.24
GPC1-207ENST00000466624 RAB6CQ53S08 254 aa16.58■□□□□ 0.24
GPC1-207ENST00000466624 FAM133BQ5BKY9 247 aaKnown RBP16.58■□□□□ 0.24
GPC1-207ENST00000466624 TRIM68Q6AZZ1 485 aa16.58■□□□□ 0.24
GPC1-207ENST00000466624 ARFGAP1Q8N6T3 406 aa16.58■□□□□ 0.24
GPC1-207ENST00000466624 CSGALNACT1Q8TDX6 532 aa16.58■□□□□ 0.24
GPC1-207ENST00000466624 BTBD6Q96KE9 485 aa16.58■□□□□ 0.24
GPC1-207ENST00000466624 C1orf74Q96LT6 269 aa16.58■□□□□ 0.24
GPC1-207ENST00000466624 RAB6CQ9H0N0 254 aa16.58■□□□□ 0.24
GPC1-207ENST00000466624 EBF3Q9H4W6 596 aa16.58■□□□□ 0.24
GPC1-207ENST00000466624 ECT2Q9H8V3 914 aa16.58■□□□□ 0.24
GPC1-207ENST00000466624 SPHK2Q9NRA0 654 aa16.58■□□□□ 0.24
GPC1-207ENST00000466624 TFR2Q9UP52 801 aa16.58■□□□□ 0.24
GPC1-207ENST00000466624 DOCK4Q8N1I0 1966 aa16.58■□□□□ 0.24
GPC1-207ENST00000466624 KIAA1549LQ6ZVL6 1849 aa16.57■□□□□ 0.24
GPC1-207ENST00000466624 I6L893 689 aaPredicted RBP16.57■□□□□ 0.24
GPC1-207ENST00000466624 SCAMP3O14828 347 aaKnown RBP16.57■□□□□ 0.24
GPC1-207ENST00000466624 NARSO43776 548 aaKnown RBP16.57■□□□□ 0.24
GPC1-207ENST00000466624 PAGE1O75459 146 aa16.57■□□□□ 0.24
GPC1-207ENST00000466624 ADH1CP00326 375 aa16.57■□□□□ 0.24
GPC1-207ENST00000466624 CYP17A1P05093 508 aa16.57■□□□□ 0.24
GPC1-207ENST00000466624 GLULP15104 373 aa16.57■□□□□ 0.24
GPC1-207ENST00000466624 ARSAP15289 507 aa16.57■□□□□ 0.24
GPC1-207ENST00000466624 SLC1A1P43005 524 aa16.57■□□□□ 0.24
GPC1-207ENST00000466624 NOP2P46087 812 aaKnown RBP16.57■□□□□ 0.24
GPC1-207ENST00000466624 NRG1Q02297 640 aaPredicted RBP16.57■□□□□ 0.24
GPC1-207ENST00000466624 DHCR24Q15392 516 aa16.57■□□□□ 0.24
GPC1-207ENST00000466624 IFI16Q16666 785 aaKnown RBP16.57■□□□□ 0.24
GPC1-207ENST00000466624 MS4A13Q5J8X5 152 aa16.57■□□□□ 0.24
GPC1-207ENST00000466624 NADSYN1Q6IA69 706 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms