RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 NSUN3Q9H649 340 aaKnown RBP12.57□□□□□ -0.4
VPS16-206ENST00000466415 IGFLR1Q9H665 355 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 SFXN1Q9H9B4 322 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 PIDD1Q9HB75 910 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 IL21Q9HBE4 155 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 TMPRSS4Q9NRS4 437 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 DZANK1Q9NVP4 752 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 STIM2Q9P246 746 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.57□□□□□ -0.4
VPS16-206ENST00000466415 V9GYY5 206 aaPredicted RBP12.57□□□□□ -0.4
VPS16-206ENST00000466415 CLUHO75153 1309 aa12.57□□□□□ -0.4
VPS16-206ENST00000466415 TRAV19A0A0A6YYK7 116 aa12.56□□□□□ -0.4
VPS16-206ENST00000466415 A0A1W2PRU2 124 aa12.56□□□□□ -0.4
VPS16-206ENST00000466415 TCRBV7S2A1N4TA0A589 114 aa12.56□□□□□ -0.4
VPS16-206ENST00000466415 C2orf78A6NCI8 922 aa12.56□□□□□ -0.4
VPS16-206ENST00000466415 PAGE1O75459 146 aa12.56□□□□□ -0.4
VPS16-206ENST00000466415 OAS1P00973 400 aaKnown RBP12.56□□□□□ -0.4
VPS16-206ENST00000466415 CKMP06732 381 aa12.56□□□□□ -0.4
VPS16-206ENST00000466415 POU2F2P09086 479 aa12.56□□□□□ -0.4
VPS16-206ENST00000466415 IRF1P10914 325 aa12.56□□□□□ -0.4
VPS16-206ENST00000466415 GOT1P17174 413 aa12.56□□□□□ -0.4
VPS16-206ENST00000466415 TGM2P21980 687 aa12.56□□□□□ -0.4
VPS16-206ENST00000466415 DDX6P26196 483 aaKnown RBP eCLIP12.56□□□□□ -0.4
VPS16-206ENST00000466415 CHRNA3P32297 505 aa12.56□□□□□ -0.4
VPS16-206ENST00000466415 HARS2P49590 506 aaKnown RBP12.56□□□□□ -0.4
VPS16-206ENST00000466415 MLLT1Q03111 559 aaPredicted RBP12.56□□□□□ -0.4
VPS16-206ENST00000466415 KLF1Q13351 362 aaPredicted RBP12.56□□□□□ -0.4
VPS16-206ENST00000466415 EIF4EBP2Q13542 120 aaPredicted RBP12.56□□□□□ -0.4
VPS16-206ENST00000466415 ACBD5Q5T8D3 534 aaPredicted RBP12.56□□□□□ -0.4
VPS16-206ENST00000466415 BBS12Q6ZW61 710 aa12.56□□□□□ -0.4
VPS16-206ENST00000466415 ANKS1BQ7Z6G8 1248 aa12.56□□□□□ -0.4
VPS16-206ENST00000466415 NOA1Q8NC60 698 aaKnown RBP12.56□□□□□ -0.4
VPS16-206ENST00000466415 CCDC26Q8TAB7 109 aa12.56□□□□□ -0.4
VPS16-206ENST00000466415 C1orf54Q8WWF1 131 aa12.56□□□□□ -0.4
VPS16-206ENST00000466415 FAF2Q96CS3 445 aa12.56□□□□□ -0.4
VPS16-206ENST00000466415 SLC39A13Q96H72 371 aa12.56□□□□□ -0.4
VPS16-206ENST00000466415 BTN2A3PQ96KV6 586 aa12.56□□□□□ -0.4
VPS16-206ENST00000466415 CCDC114Q96M63 670 aa12.56□□□□□ -0.4
VPS16-206ENST00000466415 CSPG4P5Q96PW8 444 aa12.56□□□□□ -0.4
VPS16-206ENST00000466415 HERPUD2Q9BSE4 406 aa12.56□□□□□ -0.4
VPS16-206ENST00000466415 FRMD8P1Q9BZ68 369 aaPredicted RBP12.56□□□□□ -0.4
VPS16-206ENST00000466415 PRKD2Q9BZL6 878 aa12.56□□□□□ -0.4
VPS16-206ENST00000466415 SIK2Q9H0K1 926 aa12.56□□□□□ -0.4
VPS16-206ENST00000466415 DDX47Q9H0S4 455 aaKnown RBP12.56□□□□□ -0.4
VPS16-206ENST00000466415 OSBPL2Q9H1P3 480 aa12.56□□□□□ -0.4
VPS16-206ENST00000466415 SLITRK6Q9H5Y7 841 aa12.56□□□□□ -0.4
VPS16-206ENST00000466415 ZNF576Q9H609 170 aa12.56□□□□□ -0.4
VPS16-206ENST00000466415 PRDM16Q9HAZ2 1276 aa12.56□□□□□ -0.4
VPS16-206ENST00000466415 MTMR10Q9NXD2 777 aa12.56□□□□□ -0.4
VPS16-206ENST00000466415 CCDC195A0A1B0GUA6 201 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 A0A1W2PPC1 479 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 KCNU1A8MYU2 1149 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 APOC4-APOC2K7ER74 178 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 MCF2LO15068 1137 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 APOC2P02655 101 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 RHOP08100 348 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 RHOXF2BP0C7M4 288 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 PFKLP17858 780 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 HTR7P34969 479 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 GGCXP38435 758 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 SLC11A2P49281 568 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 FNTAP49354 379 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 SNX1Q13596 522 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 SIX1Q15475 284 aaPredicted RBP12.55□□□□□ -0.4
VPS16-206ENST00000466415 TXNDC8Q6A555 127 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 RWDD4Q6NW29 188 aaKnown RBP12.55□□□□□ -0.4
VPS16-206ENST00000466415 LRRC31Q6UY01 552 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 RFX8Q6ZV50 586 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 TMEM150AQ86TG1 271 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 CHSY1Q86X52 802 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 CCDC105Q8IYK2 499 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 PRELID2Q8N945 189 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 C12orf50Q8NA57 414 aaPredicted RBP12.55□□□□□ -0.4
VPS16-206ENST00000466415 GRK7Q8WTQ7 553 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 SMG7Q92540 1137 aaKnown RBP12.55□□□□□ -0.4
VPS16-206ENST00000466415 TSC1Q92574 1164 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 P3H4Q92791 437 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 TBC1D31Q96DN5 1066 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 RHOXF2Q9BQY4 288 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 LRRC3Q9BY71 257 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 DCLK3Q9C098 648 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 PRO3102Q9H379 93 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 ANLNQ9NQW6 1124 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 HCFC1R1Q9NWW0 138 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 CWC15Q9P013 229 aaKnown RBP12.55□□□□□ -0.4
VPS16-206ENST00000466415 OR12D3Q9UGF7 316 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 LSM7Q9UK45 103 aaKnown RBP12.55□□□□□ -0.4
VPS16-206ENST00000466415 SNX10Q9Y5X0 201 aa12.55□□□□□ -0.4
VPS16-206ENST00000466415 ZNF638Q14966 1978 aaKnown RBP12.55□□□□□ -0.4
VPS16-206ENST00000466415 ZNF197O14709 1029 aa12.54□□□□□ -0.4
VPS16-206ENST00000466415 IGLV3-27P01718 113 aa12.54□□□□□ -0.4
VPS16-206ENST00000466415 GJA1P17302 382 aa12.54□□□□□ -0.4
VPS16-206ENST00000466415 HDCP19113 662 aa12.54□□□□□ -0.4
VPS16-206ENST00000466415 AMPD1P23109 780 aa12.54□□□□□ -0.4
VPS16-206ENST00000466415 EPHB2P29323 1055 aa12.54□□□□□ -0.4
VPS16-206ENST00000466415 SERPINB6P35237 376 aa12.54□□□□□ -0.4
VPS16-206ENST00000466415 COILP38432 576 aaPredicted RBP12.54□□□□□ -0.4
VPS16-206ENST00000466415 TERF1P54274 439 aa12.54□□□□□ -0.4
VPS16-206ENST00000466415 EPHA5P54756 1037 aa12.54□□□□□ -0.4
VPS16-206ENST00000466415 DR1Q01658 176 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms