RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 FAM90A2PQ658T7 463 aa4.94□□□□□ -1.62
LRCH3-211ENST00000466054 TANGO2Q6ICL3 276 aa4.94□□□□□ -1.62
LRCH3-211ENST00000466054 P3H2Q8IVL5 708 aa4.94□□□□□ -1.62
LRCH3-211ENST00000466054 NKAPQ8N5F7 415 aaKnown RBP4.94□□□□□ -1.62
LRCH3-211ENST00000466054 SPATA5Q8NB90 893 aa4.94□□□□□ -1.62
LRCH3-211ENST00000466054 SNX18Q96RF0 628 aa4.94□□□□□ -1.62
LRCH3-211ENST00000466054 PAAF1Q9BRP4 392 aa4.94□□□□□ -1.62
LRCH3-211ENST00000466054 CINPQ9BW66 212 aaPredicted RBP4.94□□□□□ -1.62
LRCH3-211ENST00000466054 MYH16Q9H6N6 1097 aa4.94□□□□□ -1.62
LRCH3-211ENST00000466054 GAR1Q9NY12 217 aaKnown RBP4.94□□□□□ -1.62
LRCH3-211ENST00000466054 TFCP2L1Q9NZI6 479 aa4.94□□□□□ -1.62
LRCH3-211ENST00000466054 LRFN1Q9P244 771 aa4.94□□□□□ -1.62
LRCH3-211ENST00000466054 SERGEFQ9UGK8 458 aa4.94□□□□□ -1.62
LRCH3-211ENST00000466054 KAT6AQ92794 2004 aa4.94□□□□□ -1.62
LRCH3-211ENST00000466054 GXYLT2A0PJZ3 443 aa4.93□□□□□ -1.62
LRCH3-211ENST00000466054 H7C1Q1 480 aa4.93□□□□□ -1.62
LRCH3-211ENST00000466054 SMIM22K7EJ46 135 aa4.93□□□□□ -1.62
LRCH3-211ENST00000466054 DRD1P21728 446 aa4.93□□□□□ -1.62
LRCH3-211ENST00000466054 HOXA4Q00056 320 aaPredicted RBP4.93□□□□□ -1.62
LRCH3-211ENST00000466054 DHX8Q14562 1220 aaKnown RBP4.93□□□□□ -1.62
LRCH3-211ENST00000466054 ZRSR2Q15696 482 aaKnown RBP4.93□□□□□ -1.62
LRCH3-211ENST00000466054 FNDC1Q4ZHG4 1894 aaPredicted RBP4.93□□□□□ -1.62
LRCH3-211ENST00000466054 RNASE12Q5GAN4 147 aaKnown RBP4.93□□□□□ -1.62
LRCH3-211ENST00000466054 ANO1Q5XXA6 986 aa4.93□□□□□ -1.62
LRCH3-211ENST00000466054 GRHL2Q6ISB3 625 aa4.93□□□□□ -1.62
LRCH3-211ENST00000466054 CCDC144NLQ6NUI1 221 aa4.93□□□□□ -1.62
LRCH3-211ENST00000466054 TRIM72Q6ZMU5 477 aa4.93□□□□□ -1.62
LRCH3-211ENST00000466054 LINC01465Q8N7H1 131 aa4.93□□□□□ -1.62
LRCH3-211ENST00000466054 C12orf76Q8N812 135 aaPredicted RBP4.93□□□□□ -1.62
LRCH3-211ENST00000466054 TERB1Q8NA31 727 aa4.93□□□□□ -1.62
LRCH3-211ENST00000466054 TRAPPC12Q8WVT3 735 aa4.93□□□□□ -1.62
LRCH3-211ENST00000466054 CCT6BQ92526 530 aa4.93□□□□□ -1.62
LRCH3-211ENST00000466054 DAZAP1Q96EP5 407 aaKnown RBP4.93□□□□□ -1.62
LRCH3-211ENST00000466054 EIF3CQ99613 913 aaKnown RBP4.93□□□□□ -1.62
LRCH3-211ENST00000466054 FSCN3Q9NQT6 498 aa4.93□□□□□ -1.62
LRCH3-211ENST00000466054 CTIFO43310 598 aaKnown RBP4.92□□□□□ -1.62
LRCH3-211ENST00000466054 NBNO60934 754 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 TAF5LO75529 589 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 USP1O94782 785 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 TNFRSF6BO95407 300 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 FPR3P25089 353 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 YY1P25490 414 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 CYP4F2P78329 520 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 CFHR3Q02985 330 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 DEUP1Q05D60 604 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 CCDC15Q0P6D6 951 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 SEMA3BQ13214 749 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 TRIM60Q495X7 471 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 ATPAF1Q5TC12 328 aaPredicted RBP4.92□□□□□ -1.62
LRCH3-211ENST00000466054 PRAMEF17Q5VTA0 474 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 RINT1Q6NUQ1 792 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 MSANTD2Q6P1R3 559 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 KLHL17Q6TDP4 642 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 KIRREL2Q6UWL6 708 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 NAPRTQ6XQN6 538 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 RINLQ6ZS11 566 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 PIK3AP1Q6ZUJ8 805 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 EXOC8Q8IYI6 725 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 MYCT1Q8N699 235 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 PRSS3P2Q8NHM4 247 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 REPS1Q96D71 796 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 TMEM79Q9BSE2 394 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 RTKNQ9BST9 563 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 PAGR1Q9BTK6 254 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 TMEM120AQ9BXJ8 343 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 CIPCQ9C0C6 399 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 PRSS22Q9GZN4 317 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 MYLK2Q9H1R3 596 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 MAGEH1Q9H213 219 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 EPS8L2Q9H6S3 715 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 ASAP1Q9ULH1 1129 aa4.92□□□□□ -1.62
LRCH3-211ENST00000466054 SCAF8Q9UPN6 1271 aaKnown RBP4.92□□□□□ -1.62
LRCH3-211ENST00000466054 UBE2J1Q9Y385 318 aaPredicted RBP4.92□□□□□ -1.62
LRCH3-211ENST00000466054 ERVV-2B6SEH9 535 aa4.91□□□□□ -1.62
LRCH3-211ENST00000466054 BTBD19C9JJ37 291 aa4.91□□□□□ -1.62
LRCH3-211ENST00000466054 FCHO1O14526 889 aa4.91□□□□□ -1.62
LRCH3-211ENST00000466054 DNPH1O43598 174 aa4.91□□□□□ -1.62
LRCH3-211ENST00000466054 PDE8BO95263 885 aa4.91□□□□□ -1.62
LRCH3-211ENST00000466054 TMIGD3P0DMS9 266 aaPredicted RBP4.91□□□□□ -1.62
LRCH3-211ENST00000466054 MATN1P21941 496 aa4.91□□□□□ -1.62
LRCH3-211ENST00000466054 ARHGAP25P42331 645 aa4.91□□□□□ -1.62
LRCH3-211ENST00000466054 HALP42357 657 aa4.91□□□□□ -1.62
LRCH3-211ENST00000466054 CDK7P50613 346 aa4.91□□□□□ -1.62
LRCH3-211ENST00000466054 BFSP2Q13515 415 aa4.91□□□□□ -1.62
LRCH3-211ENST00000466054 GRM4Q14833 912 aa4.91□□□□□ -1.62
LRCH3-211ENST00000466054 KRTAP5-1Q6L8H4 278 aa4.91□□□□□ -1.62
LRCH3-211ENST00000466054 DLK2Q6UY11 383 aa4.91□□□□□ -1.62
LRCH3-211ENST00000466054 BCDIN3DQ7Z5W3 292 aaKnown RBP4.91□□□□□ -1.62
LRCH3-211ENST00000466054 TRABD2AQ86V40 505 aa4.91□□□□□ -1.62
LRCH3-211ENST00000466054 NANOGP1Q8N7R0 232 aa4.91□□□□□ -1.62
LRCH3-211ENST00000466054 FAM71DQ8N9W8 422 aa4.91□□□□□ -1.62
LRCH3-211ENST00000466054 STT3BQ8TCJ2 826 aa4.91□□□□□ -1.62
LRCH3-211ENST00000466054 OTUD7AQ8TE49 926 aaPredicted RBP4.91□□□□□ -1.62
LRCH3-211ENST00000466054 EDC3Q96F86 508 aaKnown RBP4.91□□□□□ -1.62
LRCH3-211ENST00000466054 FYTTD1Q96QD9 318 aaKnown RBP4.91□□□□□ -1.62
LRCH3-211ENST00000466054 MMS19Q96T76 1030 aa4.91□□□□□ -1.62
LRCH3-211ENST00000466054 ISCA1Q9BUE6 129 aa4.91□□□□□ -1.62
LRCH3-211ENST00000466054 PPCSQ9HAB8 311 aa4.91□□□□□ -1.62
LRCH3-211ENST00000466054 KCNK9Q9NPC2 374 aa4.91□□□□□ -1.62
LRCH3-211ENST00000466054 VPS45Q9NRW7 570 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms