RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 PLPP4Q5VZY2 271 aa6.25□□□□□ -1.41
CHMP3-206ENST00000466032 NUGGCQ68CJ6 796 aa6.25□□□□□ -1.41
CHMP3-206ENST00000466032 RSPO2Q6UXX9 243 aaPredicted RBP6.25□□□□□ -1.41
CHMP3-206ENST00000466032 ZNF771Q7L3S4 317 aaPredicted RBP6.25□□□□□ -1.41
CHMP3-206ENST00000466032 ZNF572Q7Z3I7 529 aaPredicted RBP6.25□□□□□ -1.41
CHMP3-206ENST00000466032 TMCO2Q7Z6W1 182 aaPredicted RBP6.25□□□□□ -1.41
CHMP3-206ENST00000466032 CTAGE6Q86UF2 777 aa6.25□□□□□ -1.41
CHMP3-206ENST00000466032 CTAGE4Q8IX94 777 aa6.25□□□□□ -1.41
CHMP3-206ENST00000466032 DEFB106AQ8N104 65 aa6.25□□□□□ -1.41
CHMP3-206ENST00000466032 ATP6V0D2Q8N8Y2 350 aa6.25□□□□□ -1.41
CHMP3-206ENST00000466032 KCTD6Q8NC69 237 aa6.25□□□□□ -1.41
CHMP3-206ENST00000466032 FAM172AQ8WUF8 416 aa6.25□□□□□ -1.41
CHMP3-206ENST00000466032 RUBCNQ92622 972 aa6.25□□□□□ -1.41
CHMP3-206ENST00000466032 MRPS31Q92665 395 aaKnown RBP6.25□□□□□ -1.41
CHMP3-206ENST00000466032 TIFAQ96CG3 184 aa6.25□□□□□ -1.41
CHMP3-206ENST00000466032 MRPL38Q96DV4 380 aaKnown RBP6.25□□□□□ -1.41
CHMP3-206ENST00000466032 C1orf74Q96LT6 269 aa6.25□□□□□ -1.41
CHMP3-206ENST00000466032 PGLYRP2Q96PD5 576 aa6.25□□□□□ -1.41
CHMP3-206ENST00000466032 HAPLN3Q96S86 360 aa6.25□□□□□ -1.41
CHMP3-206ENST00000466032 ZNF670Q9BS34 389 aa6.25□□□□□ -1.41
CHMP3-206ENST00000466032 C17orf80Q9BSJ5 609 aa6.25□□□□□ -1.41
CHMP3-206ENST00000466032 MAK16Q9BXY0 300 aaKnown RBP6.25□□□□□ -1.41
CHMP3-206ENST00000466032 DCLK3Q9C098 648 aa6.25□□□□□ -1.41
CHMP3-206ENST00000466032 WDCPQ9H6R7 721 aa6.25□□□□□ -1.41
CHMP3-206ENST00000466032 ZWILCHQ9H900 591 aa6.25□□□□□ -1.41
CHMP3-206ENST00000466032 ALG13Q9NP73 1137 aaKnown RBP6.25□□□□□ -1.41
CHMP3-206ENST00000466032 ASAH2Q9NR71 780 aa6.25□□□□□ -1.41
CHMP3-206ENST00000466032 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.25□□□□□ -1.41
CHMP3-206ENST00000466032 STIM2Q9P246 746 aa6.25□□□□□ -1.41
CHMP3-206ENST00000466032 TLR6Q9Y2C9 796 aa6.25□□□□□ -1.41
CHMP3-206ENST00000466032 ZNF510Q9Y2H8 683 aa6.25□□□□□ -1.41
CHMP3-206ENST00000466032 MRFAP1Q9Y605 127 aa6.25□□□□□ -1.41
CHMP3-206ENST00000466032 RAD54BQ9Y620 910 aa6.25□□□□□ -1.41
CHMP3-206ENST00000466032 MYH10P35580 1976 aa6.25□□□□□ -1.41
CHMP3-206ENST00000466032 PTPRDP23468 1912 aa6.25□□□□□ -1.41
CHMP3-206ENST00000466032 SLC35F4A4IF30 521 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 TMEM110-MUSTN1A8MSY1 372 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 EFCAB8A8MWE9 144 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 M0QYT0 321 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 GRM6O15303 877 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 NCAM2O15394 837 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 DDX3YO15523 660 aaKnown RBP6.24□□□□□ -1.41
CHMP3-206ENST00000466032 IRAK2O43187 625 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 PAX4O43316 350 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 TRUB2O95900 331 aaKnown RBP6.24□□□□□ -1.41
CHMP3-206ENST00000466032 FTCDO95954 541 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 ABL1P00519 1130 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 APOEP02649 317 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 ATP1A1P05023 1023 aaKnown RBP6.24□□□□□ -1.41
CHMP3-206ENST00000466032 C8AP07357 584 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 RARGP13631 454 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 HOXB8P17481 243 aaPredicted RBP6.24□□□□□ -1.41
CHMP3-206ENST00000466032 ATF6P18850 670 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 POU3F3P20264 500 aaPredicted RBP6.24□□□□□ -1.41
CHMP3-206ENST00000466032 WEE1P30291 646 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 MIPP30301 263 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 NR2C2P49116 596 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 CXCR3P49682 368 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 CACNA2D1P54289 1103 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 EPHA5P54756 1037 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 ERVFC1P60507 584 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 SATB1Q01826 763 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 SLC25A11Q02978 314 aaKnown RBP6.24□□□□□ -1.41
CHMP3-206ENST00000466032 TWF1Q12792 350 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 TAF10Q12962 218 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 TRIP4Q15650 581 aaPredicted RBP6.24□□□□□ -1.41
CHMP3-206ENST00000466032 DPYSL2Q16555 572 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 C2CD6Q53TS8 623 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 ICE2Q659A1 982 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 TMEM184AQ6ZMB5 413 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 DNAJB7Q7Z6W7 309 aaPredicted RBP6.24□□□□□ -1.41
CHMP3-206ENST00000466032 LRRC49Q8IUZ0 686 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 C17orf53Q8N3J3 647 aaPredicted RBP6.24□□□□□ -1.41
CHMP3-206ENST00000466032 LZTR1Q8N653 840 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 ZNF557Q8N988 423 aaPredicted RBP6.24□□□□□ -1.41
CHMP3-206ENST00000466032 CCDC26Q8TAB7 109 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 JOSD2Q8TAC2 188 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 SCAMP5Q8TAC9 235 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 SLC7A14Q8TBB6 771 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 FAM71BQ8TC56 605 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 CCHCR1Q8TD31 782 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 RNF34Q969K3 372 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 PLD4Q96BZ4 506 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 HAUS1Q96CS2 278 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 B3GALT6Q96L58 329 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 CFAP57Q96MR6 1250 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 LPIN3Q9BQK8 851 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 NACA2Q9H009 215 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 BRD8Q9H0E9 1235 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 OSBPL2Q9H1P3 480 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 PRO3102Q9H379 93 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 NSUN3Q9H649 340 aaKnown RBP6.24□□□□□ -1.41
CHMP3-206ENST00000466032 TLE6Q9H808 572 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 FAM204AQ9H8W3 233 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 SFXN1Q9H9B4 322 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 MED4Q9NPJ6 270 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 DDIT4Q9NX09 232 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.24□□□□□ -1.41
CHMP3-206ENST00000466032 PTPRSQ13332 1948 aa6.24□□□□□ -1.41
CHMP3-206ENST00000466032 NLRC5Q86WI3 1866 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms