RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 PUM1Q14671 1186 aaKnown RBP eCLIP22.68■■□□□ 1.22
LIME1-203ENST00000465591 TAF5Q15542 800 aa22.68■■□□□ 1.22
LIME1-203ENST00000465591 ELF2Q15723 593 aa22.68■■□□□ 1.22
LIME1-203ENST00000465591 FAM133BQ5BKY9 247 aaKnown RBP22.68■■□□□ 1.22
LIME1-203ENST00000465591 ADGRF1Q5T601 910 aa22.68■■□□□ 1.22
LIME1-203ENST00000465591 TMEM215Q68D42 235 aa22.68■■□□□ 1.22
LIME1-203ENST00000465591 NADSYN1Q6IA69 706 aa22.68■■□□□ 1.22
LIME1-203ENST00000465591 RFWD3Q6PCD5 774 aa22.68■■□□□ 1.22
LIME1-203ENST00000465591 GOLGA1Q92805 767 aa22.68■■□□□ 1.22
LIME1-203ENST00000465591 MYEOVQ96EZ4 313 aa22.68■■□□□ 1.22
LIME1-203ENST00000465591 FCRL2Q96LA5 508 aaPredicted RBP22.68■■□□□ 1.22
LIME1-203ENST00000465591 CKAP5Q14008 2032 aa22.68■■□□□ 1.22
LIME1-203ENST00000465591 RHOBTB1O94844 696 aa22.67■■□□□ 1.22
LIME1-203ENST00000465591 MPLP40238 635 aa22.67■■□□□ 1.22
LIME1-203ENST00000465591 ATXN1P54253 815 aaKnown RBP22.67■■□□□ 1.22
LIME1-203ENST00000465591 PITX1P78337 314 aaPredicted RBP22.67■■□□□ 1.22
LIME1-203ENST00000465591 RING1Q06587 406 aa22.67■■□□□ 1.22
LIME1-203ENST00000465591 MPPE1Q53F39 396 aa22.67■■□□□ 1.22
LIME1-203ENST00000465591 TCP11X2Q5H9J9 407 aa22.67■■□□□ 1.22
LIME1-203ENST00000465591 CT47A1Q5JQC4 288 aaPredicted RBP22.67■■□□□ 1.22
LIME1-203ENST00000465591 TAC4Q86UU9 113 aa22.67■■□□□ 1.22
LIME1-203ENST00000465591 SLC47A2Q86VL8 602 aa22.67■■□□□ 1.22
LIME1-203ENST00000465591 PGBD3Q8N328 593 aa22.67■■□□□ 1.22
LIME1-203ENST00000465591 IPO4Q8TEX9 1081 aaKnown RBP22.67■■□□□ 1.22
LIME1-203ENST00000465591 SORCS1Q8WY21 1168 aa22.67■■□□□ 1.22
LIME1-203ENST00000465591 CPXM1Q96SM3 734 aa22.67■■□□□ 1.22
LIME1-203ENST00000465591 SLC6A17Q9H1V8 727 aa22.67■■□□□ 1.22
LIME1-203ENST00000465591 TAB2Q9NYJ8 693 aa22.67■■□□□ 1.22
LIME1-203ENST00000465591 PCDHGC3Q9UN70 934 aa22.67■■□□□ 1.22
LIME1-203ENST00000465591 PCDHGA5Q9Y5G8 931 aa22.67■■□□□ 1.22
LIME1-203ENST00000465591 FHOD1Q9Y613 1164 aa22.67■■□□□ 1.22
LIME1-203ENST00000465591 PI4KAP42356 2102 aa22.67■■□□□ 1.22
LIME1-203ENST00000465591 CNOT1A5YKK6 2376 aaKnown RBP22.67■■□□□ 1.22
LIME1-203ENST00000465591 MUC22E2RYF6 1773 aaPredicted RBP22.66■■□□□ 1.22
LIME1-203ENST00000465591 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.66■■□□□ 1.22
LIME1-203ENST00000465591 ZNF806P0C7X5 589 aa22.66■■□□□ 1.22
LIME1-203ENST00000465591 IL12RB1P42701 662 aa22.66■■□□□ 1.22
LIME1-203ENST00000465591 TCEAL6Q6IPX3 200 aa22.66■■□□□ 1.22
LIME1-203ENST00000465591 C11orf57Q6ZUT1 292 aaPredicted RBP22.66■■□□□ 1.22
LIME1-203ENST00000465591 ANKS1BQ7Z6G8 1248 aa22.66■■□□□ 1.22
LIME1-203ENST00000465591 FAM71AQ8IYT1 594 aa22.66■■□□□ 1.22
LIME1-203ENST00000465591 ENOX1Q8TC92 643 aaKnown RBP22.66■■□□□ 1.22
LIME1-203ENST00000465591 WFDC5Q8TCV5 224 aa22.66■■□□□ 1.22
LIME1-203ENST00000465591 TCEAL3Q969E4 200 aa22.66■■□□□ 1.22
LIME1-203ENST00000465591 TMA16Q96EY4 203 aaKnown RBP22.66■■□□□ 1.22
LIME1-203ENST00000465591 SLC39A13Q96H72 371 aa22.66■■□□□ 1.22
LIME1-203ENST00000465591 SLC2A11Q9BYW1 496 aa22.66■■□□□ 1.22
LIME1-203ENST00000465591 CD93Q9NPY3 652 aa22.66■■□□□ 1.22
LIME1-203ENST00000465591 CALCOCO1Q9P1Z2 691 aa22.66■■□□□ 1.22
LIME1-203ENST00000465591 THAP10Q9P2Z0 257 aaPredicted RBP22.66■■□□□ 1.22
LIME1-203ENST00000465591 CDV3Q9UKY7 258 aaKnown RBP22.66■■□□□ 1.22
LIME1-203ENST00000465591 STON1Q9Y6Q2 735 aa22.66■■□□□ 1.22
LIME1-203ENST00000465591 NCOR2Q9Y618 2525 aa22.65■■□□□ 1.22
LIME1-203ENST00000465591 BCLAF3A2AJT9 711 aaKnown RBP22.65■■□□□ 1.22
LIME1-203ENST00000465591 SART1O43290 800 aaKnown RBP22.65■■□□□ 1.22
LIME1-203ENST00000465591 ACSL4O60488 711 aa22.65■■□□□ 1.22
LIME1-203ENST00000465591 NDUFV2P19404 249 aa22.65■■□□□ 1.22
LIME1-203ENST00000465591 HLA-FP30511 346 aa22.65■■□□□ 1.22
LIME1-203ENST00000465591 CREB5Q02930 508 aa22.65■■□□□ 1.22
LIME1-203ENST00000465591 PTK2Q05397 1052 aa22.65■■□□□ 1.22
LIME1-203ENST00000465591 DRAP1Q14919 205 aaPredicted RBP22.65■■□□□ 1.22
LIME1-203ENST00000465591 PIK3R6Q5UE93 754 aa22.65■■□□□ 1.22
LIME1-203ENST00000465591 KLHDC7AQ5VTJ3 777 aa22.65■■□□□ 1.22
LIME1-203ENST00000465591 CDKAL1Q5VV42 579 aa22.65■■□□□ 1.22
LIME1-203ENST00000465591 NUGGCQ68CJ6 796 aa22.65■■□□□ 1.22
LIME1-203ENST00000465591 SDE2Q6IQ49 451 aa22.65■■□□□ 1.22
LIME1-203ENST00000465591 BEND5Q7L4P6 421 aa22.65■■□□□ 1.22
LIME1-203ENST00000465591 DGLUCYQ7Z3D6 616 aa22.65■■□□□ 1.22
LIME1-203ENST00000465591 C1orf131Q8NDD1 294 aaKnown RBP22.65■■□□□ 1.22
LIME1-203ENST00000465591 PRICKLE1Q96MT3 831 aaPredicted RBP22.65■■□□□ 1.22
LIME1-203ENST00000465591 LSM14BQ9BX40 385 aaKnown RBP22.65■■□□□ 1.22
LIME1-203ENST00000465591 PLCB1Q9NQ66 1216 aa22.65■■□□□ 1.22
LIME1-203ENST00000465591 ELOVL2Q9NXB9 296 aa22.65■■□□□ 1.22
LIME1-203ENST00000465591 XPO7Q9UIA9 1087 aaKnown RBP22.65■■□□□ 1.22
LIME1-203ENST00000465591 PES1O00541 588 aaKnown RBP22.64■■□□□ 1.21
LIME1-203ENST00000465591 EEF1GP26641 437 aaKnown RBP22.64■■□□□ 1.21
LIME1-203ENST00000465591 ENPP2Q13822 863 aa22.64■■□□□ 1.21
LIME1-203ENST00000465591 RNF43Q68DV7 783 aa22.64■■□□□ 1.21
LIME1-203ENST00000465591 ERMP1Q7Z2K6 904 aa22.64■■□□□ 1.21
LIME1-203ENST00000465591 C11orf74Q86VG3 221 aa22.64■■□□□ 1.21
LIME1-203ENST00000465591 UNC45BQ8IWX7 931 aa22.64■■□□□ 1.21
LIME1-203ENST00000465591 PPP1R13BQ96KQ4 1090 aa22.64■■□□□ 1.21
LIME1-203ENST00000465591 SERPINB11Q96P15 392 aa22.64■■□□□ 1.21
LIME1-203ENST00000465591 NAA15Q9BXJ9 866 aaKnown RBP22.64■■□□□ 1.21
LIME1-203ENST00000465591 LHX5Q9H2C1 402 aa22.64■■□□□ 1.21
LIME1-203ENST00000465591 TLR6Q9Y2C9 796 aa22.64■■□□□ 1.21
LIME1-203ENST00000465591 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.63■■□□□ 1.21
LIME1-203ENST00000465591 IGLV3-25P01717 112 aa22.63■■□□□ 1.21
LIME1-203ENST00000465591 ERBB2P04626 1255 aa22.63■■□□□ 1.21
LIME1-203ENST00000465591 SLC11A2P49281 568 aa22.63■■□□□ 1.21
LIME1-203ENST00000465591 KLK7P49862 253 aa22.63■■□□□ 1.21
LIME1-203ENST00000465591 ZNF445P59923 1031 aa22.63■■□□□ 1.21
LIME1-203ENST00000465591 YWHAZP63104 245 aaKnown RBP22.63■■□□□ 1.21
LIME1-203ENST00000465591 NNTQ13423 1086 aa22.63■■□□□ 1.21
LIME1-203ENST00000465591 RAPGEF1Q13905 1077 aa22.63■■□□□ 1.21
LIME1-203ENST00000465591 ZNF234Q14588 700 aa22.63■■□□□ 1.21
LIME1-203ENST00000465591 PTPN20Q4JDL3 420 aa22.63■■□□□ 1.21
LIME1-203ENST00000465591 TMEFF1Q8IYR6 380 aa22.63■■□□□ 1.21
LIME1-203ENST00000465591 NETO1Q8TDF5 533 aa22.63■■□□□ 1.21
LIME1-203ENST00000465591 AZIN2Q96A70 460 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms