RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-208ENST00000465245 BCAT1P54687 386 aa12.61□□□□□ -0.39
TRA2B-208ENST00000465245 CLDN6P56747 220 aa12.61□□□□□ -0.39
TRA2B-208ENST00000465245 AMPD3Q01432 767 aa12.61□□□□□ -0.39
TRA2B-208ENST00000465245 EFEMP1Q12805 493 aa12.61□□□□□ -0.39
TRA2B-208ENST00000465245 CAMK2GQ13555 558 aaPredicted RBP12.61□□□□□ -0.39
TRA2B-208ENST00000465245 FNDC3BQ53EP0 1204 aaKnown RBP12.61□□□□□ -0.39
TRA2B-208ENST00000465245 TMEM215Q68D42 235 aa12.61□□□□□ -0.39
TRA2B-208ENST00000465245 CCDC186Q7Z3E2 898 aa12.61□□□□□ -0.39
TRA2B-208ENST00000465245 SCD5Q86SK9 330 aa12.61□□□□□ -0.39
TRA2B-208ENST00000465245 ZNF605Q86T29 641 aa12.61□□□□□ -0.39
TRA2B-208ENST00000465245 C12orf56Q8IXR9 622 aa12.61□□□□□ -0.39
TRA2B-208ENST00000465245 ZNF366Q8N895 744 aa12.61□□□□□ -0.39
TRA2B-208ENST00000465245 RBBP8NLQ8NC74 664 aaPredicted RBP12.61□□□□□ -0.39
TRA2B-208ENST00000465245 LSM14AQ8ND56 463 aaKnown RBP12.61□□□□□ -0.39
TRA2B-208ENST00000465245 PARD3BQ8TEW8 1205 aa12.61□□□□□ -0.39
TRA2B-208ENST00000465245 DDI1Q8WTU0 396 aa12.61□□□□□ -0.39
TRA2B-208ENST00000465245 CDK5RAP1Q96SZ6 601 aaKnown RBP12.61□□□□□ -0.39
TRA2B-208ENST00000465245 HNRNPABQ99729 332 aaKnown RBP12.61□□□□□ -0.39
TRA2B-208ENST00000465245 CLIC5Q9NZA1 410 aa12.61□□□□□ -0.39
TRA2B-208ENST00000465245 CGNQ9P2M7 1197 aaKnown RBP12.61□□□□□ -0.39
TRA2B-208ENST00000465245 TFIP11Q9UBB9 837 aaKnown RBP12.61□□□□□ -0.39
TRA2B-208ENST00000465245 AGO1Q9UL18 857 aaKnown RBP12.61□□□□□ -0.39
TRA2B-208ENST00000465245 NYNRINQ9P2P1 1898 aaKnown RBP12.61□□□□□ -0.39
TRA2B-208ENST00000465245 A0A1B0GTQ1 180 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 TIMM44O43615 452 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 DFNA5O60443 496 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 TSPAN3O60637 253 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 RFPL3O75679 317 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 KIF20AO95235 890 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 DNTTP04053 509 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 PDCP20941 246 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 ASPAP45381 313 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 KIF11P52732 1056 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 C21orf59P57076 290 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 SLC39A14Q15043 492 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 E2F4Q16254 413 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 SGSM1Q2NKQ1 1148 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 C8orf34Q49A92 452 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 TTC31Q49AM3 519 aaPredicted RBP12.6□□□□□ -0.39
TRA2B-208ENST00000465245 KCNT1Q5JUK3 1230 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 SPOPLQ6IQ16 392 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 GATAD2AQ86YP4 633 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 DENND1CQ8IV53 801 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 CPXM2Q8N436 756 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 ZNF276Q8N554 614 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 CYB5D2Q8WUJ1 264 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 BAP1Q92560 729 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 DHX58Q96C10 678 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 CYFIP2Q96F07 1278 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 TWNKQ96RR1 684 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 USP28Q96RU2 1077 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 ACE2Q9BYF1 805 aaPredicted RBP12.6□□□□□ -0.39
TRA2B-208ENST00000465245 SLC2A11Q9BYW1 496 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 CUEDC2Q9H467 287 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 FBRSQ9HAH7 460 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 PLA2G4CQ9UP65 541 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 PCDHGA1Q9Y5H4 931 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 RAI2Q9Y5P3 530 aa12.6□□□□□ -0.39
TRA2B-208ENST00000465245 MORC2Q9Y6X9 1032 aaPredicted RBP12.6□□□□□ -0.39
TRA2B-208ENST00000465245 CBX4O00257 560 aa12.59□□□□□ -0.39
TRA2B-208ENST00000465245 CAPN9O14815 690 aa12.59□□□□□ -0.39
TRA2B-208ENST00000465245 PIK3CAP42336 1068 aa12.59□□□□□ -0.39
TRA2B-208ENST00000465245 RPS14P62263 151 aaKnown RBP12.59□□□□□ -0.39
TRA2B-208ENST00000465245 CLDN10P78369 228 aa12.59□□□□□ -0.39
TRA2B-208ENST00000465245 ZBTB16Q05516 673 aa12.59□□□□□ -0.39
TRA2B-208ENST00000465245 DNAJC3Q13217 504 aa12.59□□□□□ -0.39
TRA2B-208ENST00000465245 ZACNQ401N2 412 aa12.59□□□□□ -0.39
TRA2B-208ENST00000465245 HES3Q5TGS1 186 aa12.59□□□□□ -0.39
TRA2B-208ENST00000465245 CNNM4Q6P4Q7 775 aa12.59□□□□□ -0.39
TRA2B-208ENST00000465245 UNC13DQ70J99 1090 aa12.59□□□□□ -0.39
TRA2B-208ENST00000465245 RSRC2Q7L4I2 434 aaKnown RBP12.59□□□□□ -0.39
TRA2B-208ENST00000465245 ZNF843Q8N446 348 aa12.59□□□□□ -0.39
TRA2B-208ENST00000465245 TAF4BQ92750 862 aa12.59□□□□□ -0.39
TRA2B-208ENST00000465245 CNDP2Q96KP4 475 aaKnown RBP12.59□□□□□ -0.39
TRA2B-208ENST00000465245 ELF4Q99607 663 aaPredicted RBP12.59□□□□□ -0.39
TRA2B-208ENST00000465245 NT5C1AQ9BXI3 368 aa12.59□□□□□ -0.39
TRA2B-208ENST00000465245 TMEM245Q9H330 911 aa12.59□□□□□ -0.39
TRA2B-208ENST00000465245 SGK2Q9HBY8 427 aa12.59□□□□□ -0.39
TRA2B-208ENST00000465245 SLC39A2Q9NP94 309 aa12.59□□□□□ -0.39
TRA2B-208ENST00000465245 MARCH2Q9P0N8 246 aa12.59□□□□□ -0.39
TRA2B-208ENST00000465245 STRIP2Q9ULQ0 834 aa12.59□□□□□ -0.39
TRA2B-208ENST00000465245 MYO18BQ8IUG5 2567 aa12.58□□□□□ -0.4
TRA2B-208ENST00000465245 TEX51A0A1B0GUA7 166 aa12.58□□□□□ -0.4
TRA2B-208ENST00000465245 SLC12A8A0AV02 714 aa12.58□□□□□ -0.4
TRA2B-208ENST00000465245 LDOC1O95751 146 aaPredicted RBP12.58□□□□□ -0.4
TRA2B-208ENST00000465245 ASS1P00966 412 aaKnown RBP12.58□□□□□ -0.4
TRA2B-208ENST00000465245 RPN1P04843 607 aaKnown RBP12.58□□□□□ -0.4
TRA2B-208ENST00000465245 ITGAVP06756 1048 aa12.58□□□□□ -0.4
TRA2B-208ENST00000465245 CDK4P11802 303 aa12.58□□□□□ -0.4
TRA2B-208ENST00000465245 ABCB4P21439 1286 aa12.58□□□□□ -0.4
TRA2B-208ENST00000465245 HOXD9P28356 352 aaPredicted RBP12.58□□□□□ -0.4
TRA2B-208ENST00000465245 HLA-FP30511 346 aa12.58□□□□□ -0.4
TRA2B-208ENST00000465245 RACK1P63244 317 aaKnown RBP12.58□□□□□ -0.4
TRA2B-208ENST00000465245 DLG4P78352 724 aa12.58□□□□□ -0.4
TRA2B-208ENST00000465245 INCA1Q0VD86 236 aa12.58□□□□□ -0.4
TRA2B-208ENST00000465245 TARDBPQ13148 414 aaKnown RBP eCLIP12.58□□□□□ -0.42e-7■□□□□ 9.9
TRA2B-208ENST00000465245 KNOP1Q1ED39 458 aaKnown RBP12.58□□□□□ -0.4
TRA2B-208ENST00000465245 CHST9Q7L1S5 443 aa12.58□□□□□ -0.4
TRA2B-208ENST00000465245 GPR155Q7Z3F1 870 aa12.58□□□□□ -0.4
TRA2B-208ENST00000465245 NAV2Q8IVL1 2488 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms