RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 C2CD4BA6NLJ0 364 aa14.24□□□□□ -0.13
LIMD1-203ENST00000465039 KCNU1A8MYU2 1149 aa14.24□□□□□ -0.13
LIMD1-203ENST00000465039 AP5Z1O43299 807 aa14.24□□□□□ -0.13
LIMD1-203ENST00000465039 ACSL4O60488 711 aa14.24□□□□□ -0.13
LIMD1-203ENST00000465039 ABCB4P21439 1286 aa14.24□□□□□ -0.13
LIMD1-203ENST00000465039 RDXP35241 583 aaKnown RBP14.24□□□□□ -0.13
LIMD1-203ENST00000465039 FLT3P36888 993 aa14.24□□□□□ -0.13
LIMD1-203ENST00000465039 CXCR3P49682 368 aa14.24□□□□□ -0.13
LIMD1-203ENST00000465039 SLC18A3Q16572 532 aa14.24□□□□□ -0.13
LIMD1-203ENST00000465039 GAB4Q2WGN9 574 aa14.24□□□□□ -0.13
LIMD1-203ENST00000465039 MPPE1Q53F39 396 aa14.24□□□□□ -0.13
LIMD1-203ENST00000465039 PPP1R15BQ5SWA1 713 aa14.24□□□□□ -0.13
LIMD1-203ENST00000465039 WDR59Q6PJI9 974 aa14.24□□□□□ -0.13
LIMD1-203ENST00000465039 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.24□□□□□ -0.13
LIMD1-203ENST00000465039 ATP6V0D2Q8N8Y2 350 aa14.24□□□□□ -0.13
LIMD1-203ENST00000465039 TTC16Q8NEE8 873 aa14.24□□□□□ -0.13
LIMD1-203ENST00000465039 FLCNQ8NFG4 579 aa14.24□□□□□ -0.13
LIMD1-203ENST00000465039 KCNV2Q8TDN2 545 aa14.24□□□□□ -0.13
LIMD1-203ENST00000465039 CD101Q93033 1021 aa14.24□□□□□ -0.13
LIMD1-203ENST00000465039 WBP2Q969T9 261 aa14.24□□□□□ -0.13
LIMD1-203ENST00000465039 CHFRQ96EP1 664 aa14.24□□□□□ -0.13
LIMD1-203ENST00000465039 XPO6Q96QU8 1125 aaKnown RBP14.24□□□□□ -0.13
LIMD1-203ENST00000465039 NCAPGQ9BPX3 1015 aa14.24□□□□□ -0.13
LIMD1-203ENST00000465039 SELENOOQ9BVL4 669 aa14.24□□□□□ -0.13
LIMD1-203ENST00000465039 BBS2Q9BXC9 721 aa14.24□□□□□ -0.13
LIMD1-203ENST00000465039 DLGAP2Q9P1A6 1054 aa14.24□□□□□ -0.13
LIMD1-203ENST00000465039 ADAMTS1Q9UHI8 967 aa14.24□□□□□ -0.13
LIMD1-203ENST00000465039 LCMT1Q9UIC8 334 aa14.24□□□□□ -0.13
LIMD1-203ENST00000465039 NENFQ9UMX5 172 aa14.24□□□□□ -0.13
LIMD1-203ENST00000465039 TYW5A2RUC4 315 aaKnown RBP14.23□□□□□ -0.13
LIMD1-203ENST00000465039 FAM170BA6NMN3 283 aa14.23□□□□□ -0.13
LIMD1-203ENST00000465039 GOLGA8SH3BPF8 625 aa14.23□□□□□ -0.13
LIMD1-203ENST00000465039 M0QYT0 321 aa14.23□□□□□ -0.13
LIMD1-203ENST00000465039 GRAP2O75791 330 aa14.23□□□□□ -0.13
LIMD1-203ENST00000465039 PDGFBP01127 241 aaPredicted RBP14.23□□□□□ -0.13
LIMD1-203ENST00000465039 FTLP02792 175 aaPredicted RBP14.23□□□□□ -0.13
LIMD1-203ENST00000465039 SKILP12757 684 aa14.23□□□□□ -0.13
LIMD1-203ENST00000465039 TARSP26639 723 aaKnown RBP14.23□□□□□ -0.13
LIMD1-203ENST00000465039 OPRD1P41143 372 aa14.23□□□□□ -0.13
LIMD1-203ENST00000465039 ZNF143P52747 638 aaPredicted RBP14.23□□□□□ -0.13
LIMD1-203ENST00000465039 AIF1P55008 147 aa14.23□□□□□ -0.13
LIMD1-203ENST00000465039 UBXN2BQ14CS0 331 aa14.23□□□□□ -0.13
LIMD1-203ENST00000465039 HSF5Q4G112 596 aaPredicted RBP14.23□□□□□ -0.13
LIMD1-203ENST00000465039 IER5LQ5T953 404 aa14.23□□□□□ -0.13
LIMD1-203ENST00000465039 OTUD1Q5VV17 481 aaPredicted RBP14.23□□□□□ -0.13
LIMD1-203ENST00000465039 TXNDC11Q6PKC3 985 aa14.23□□□□□ -0.13
LIMD1-203ENST00000465039 TMC6Q7Z403 805 aa14.23□□□□□ -0.13
LIMD1-203ENST00000465039 TMEM25Q86YD3 366 aa14.23□□□□□ -0.13
LIMD1-203ENST00000465039 HJURPQ8NCD3 748 aaPredicted RBP14.23□□□□□ -0.13
LIMD1-203ENST00000465039 CENPIQ92674 756 aaPredicted RBP14.23□□□□□ -0.13
LIMD1-203ENST00000465039 PANX2Q96RD6 677 aa14.23□□□□□ -0.13
LIMD1-203ENST00000465039 CNPY3Q9BT09 278 aa14.23□□□□□ -0.13
LIMD1-203ENST00000465039 CHRDQ9H2X0 955 aa14.23□□□□□ -0.13
LIMD1-203ENST00000465039 METTL5Q9NRN9 209 aaKnown RBP14.23□□□□□ -0.13
LIMD1-203ENST00000465039 ARHGEF38Q9NXL2 777 aa14.23□□□□□ -0.13
LIMD1-203ENST00000465039 IMPACTQ9P2X3 320 aa14.23□□□□□ -0.13
LIMD1-203ENST00000465039 DEC1Q9P2X7 70 aa14.23□□□□□ -0.13
LIMD1-203ENST00000465039 FBXO10Q9UK96 956 aa14.23□□□□□ -0.13
LIMD1-203ENST00000465039 SLC27A6Q9Y2P4 619 aa14.23□□□□□ -0.13
LIMD1-203ENST00000465039 ARIH1Q9Y4X5 557 aaPredicted RBP14.23□□□□□ -0.13
LIMD1-203ENST00000465039 MUC6Q6W4X9 2439 aa14.23□□□□□ -0.13
LIMD1-203ENST00000465039 FAM86C2PA6NEL3 165 aa14.22□□□□□ -0.13
LIMD1-203ENST00000465039 HMBSP08397 361 aa14.22□□□□□ -0.13
LIMD1-203ENST00000465039 CHRNB1P11230 501 aa14.22□□□□□ -0.13
LIMD1-203ENST00000465039 TYRP14679 529 aa14.22□□□□□ -0.13
LIMD1-203ENST00000465039 PDGFRAP16234 1089 aa14.22□□□□□ -0.13
LIMD1-203ENST00000465039 FECHP22830 423 aa14.22□□□□□ -0.13
LIMD1-203ENST00000465039 RRM1P23921 792 aa14.22□□□□□ -0.13
LIMD1-203ENST00000465039 AVPR2P30518 371 aa14.22□□□□□ -0.13
LIMD1-203ENST00000465039 GRIA2P42262 883 aa14.22□□□□□ -0.13
LIMD1-203ENST00000465039 SOX9P48436 509 aa14.22□□□□□ -0.13
LIMD1-203ENST00000465039 SULT1E1P49888 294 aa14.22□□□□□ -0.13
LIMD1-203ENST00000465039 DEUP1Q05D60 604 aa14.22□□□□□ -0.13
LIMD1-203ENST00000465039 MAMLD1Q13495 774 aa14.22□□□□□ -0.13
LIMD1-203ENST00000465039 EIF4HQ15056 248 aaKnown RBP14.22□□□□□ -0.13
LIMD1-203ENST00000465039 ASTE1Q2TB18 679 aaPredicted RBP14.22□□□□□ -0.13
LIMD1-203ENST00000465039 FAM133BQ5BKY9 247 aaKnown RBP14.22□□□□□ -0.13
LIMD1-203ENST00000465039 FYB2Q5VWT5 728 aa14.22□□□□□ -0.13
LIMD1-203ENST00000465039 ALKBH5Q6P6C2 394 aaKnown RBP14.22□□□□□ -0.13
LIMD1-203ENST00000465039 C1orf74Q96LT6 269 aa14.22□□□□□ -0.13
LIMD1-203ENST00000465039 PNKPQ96T60 521 aa14.22□□□□□ -0.13
LIMD1-203ENST00000465039 FOXQ1Q9C009 403 aa14.22□□□□□ -0.13
LIMD1-203ENST00000465039 RETREG1Q9H6L5 497 aa14.22□□□□□ -0.13
LIMD1-203ENST00000465039 PIGVQ9NUD9 493 aa14.22□□□□□ -0.13
LIMD1-203ENST00000465039 TAS2R14Q9NYV8 317 aa14.22□□□□□ -0.13
LIMD1-203ENST00000465039 A0A087X0T9 212 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 CHURC1-FNTBB4DL54 471 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 EIF3CLB5ME19 914 aaKnown RBP14.21□□□□□ -0.13
LIMD1-203ENST00000465039 NEDD8-MDP1E9PL57 170 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 STK25O00506 426 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 NPC1O15118 1278 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 ATG13O75143 517 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 TULP3O75386 442 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 PAPSS2O95340 614 aaPredicted RBP14.21□□□□□ -0.13
LIMD1-203ENST00000465039 FAM228BP0C875 321 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 GPD1P21695 349 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 RFC1P35251 1148 aaPredicted RBP14.21□□□□□ -0.13
LIMD1-203ENST00000465039 TNFRSF4P43489 277 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 RNASE9P60153 205 aaKnown RBP14.21□□□□□ -0.13
LIMD1-203ENST00000465039 PITX1P78337 314 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms