RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 DACT3Q96B18 629 aaPredicted RBP9.32□□□□□ -0.92
HPS4-208ENST00000464362 RNF157Q96PX1 679 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 ZNF184Q99676 751 aaPredicted RBP9.32□□□□□ -0.92
HPS4-208ENST00000464362 HAUS8Q9BT25 410 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 TRIM15Q9C019 465 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 MTFR1LQ9H019 292 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 EFCAB1Q9HAE3 211 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 PRDM5Q9NQX1 630 aaPredicted RBP9.32□□□□□ -0.92
HPS4-208ENST00000464362 SNED1Q8TER0 1413 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 SAC3D1A6NKF1 404 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 SERPINE1P05121 402 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 THRAP10827 490 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 GOT1P17174 413 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 CHRM3P20309 590 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 OR1G1P47890 313 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 GDF10P55107 478 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 YWHAZP63104 245 aaKnown RBP9.32□□□□□ -0.92
HPS4-208ENST00000464362 GBE1Q04446 702 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 MAPRE2Q15555 327 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 FAM117BQ6P1L5 589 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 GSTCDQ8NEC7 633 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 PIWIL2Q8TC59 973 aaKnown RBP9.32□□□□□ -0.92
HPS4-208ENST00000464362 ZMAT2Q96NC0 199 aaKnown RBP9.32□□□□□ -0.92
HPS4-208ENST00000464362 RPRD1AQ96P16 312 aaPredicted RBP9.32□□□□□ -0.92
HPS4-208ENST00000464362 ASCC2Q9H1I8 757 aaPredicted RBP9.32□□□□□ -0.92
HPS4-208ENST00000464362 PRDM12Q9H4Q4 367 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 COPS7BQ9H9Q2 264 aaPredicted RBP9.32□□□□□ -0.92
HPS4-208ENST00000464362 XPNPEP1Q9NQW7 623 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 RBM22Q9NW64 420 aaKnown RBP eCLIP9.32□□□□□ -0.92
HPS4-208ENST00000464362 STXBP5LQ9Y2K9 1186 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 AK5Q9Y6K8 562 aa9.32□□□□□ -0.92
HPS4-208ENST00000464362 GAS2O43903 313 aaKnown RBP9.31□□□□□ -0.92
HPS4-208ENST00000464362 TRIM13O60858 407 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 SRP72O76094 671 aaKnown RBP9.31□□□□□ -0.92
HPS4-208ENST00000464362 PIGNO95427 931 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 CLPTM1O96005 669 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 NELFEP18615 380 aaKnown RBP9.31□□□□□ -0.92
HPS4-208ENST00000464362 SERPINB8P50452 374 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 GAD2Q05329 585 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 BNIP1Q12981 228 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 PEX6Q13608 980 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 KYAT1Q16773 422 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 MGAT5BQ3V5L5 792 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 DLK2Q6UY11 383 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 RIPOR1Q6ZS17 1223 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 CPT1BQ92523 772 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 APOL5Q9BWW9 433 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 DENND2DQ9H6A0 471 aaPredicted RBP9.31□□□□□ -0.92
HPS4-208ENST00000464362 CYP3A43Q9HB55 503 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 EML4Q9HC35 981 aaKnown RBP9.31□□□□□ -0.92
HPS4-208ENST00000464362 PDP2Q9P2J9 529 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 C2CD2Q9Y426 696 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 SNX5Q9Y5X3 404 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 ANKRD12Q6UB98 2062 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 ATP6AP2A0A1C7CYW4 349 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 KDM4FA0A1W2PPD8 638 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 SYNDIG1LA6NDD5 238 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 SRRM3A6NNA2 597 aaPredicted RBP9.31□□□□□ -0.92
HPS4-208ENST00000464362 ATP6AP2O75787 350 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 RECQL4O94761 1208 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 PARNO95453 639 aaKnown RBP9.31□□□□□ -0.92
HPS4-208ENST00000464362 POMCP01189 267 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 F7P08709 466 aaPredicted RBP9.31□□□□□ -0.92
HPS4-208ENST00000464362 SLC6A3Q01959 620 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 BST2Q10589 180 aaKnown RBP9.31□□□□□ -0.92
HPS4-208ENST00000464362 TAF1CQ15572 869 aaPredicted RBP9.31□□□□□ -0.92
HPS4-208ENST00000464362 SH3PXD2AQ5TCZ1 1133 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 VSTM1Q6UX27 236 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 UNC5AQ6ZN44 842 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 PRPF18Q99633 342 aaKnown RBP9.31□□□□□ -0.92
HPS4-208ENST00000464362 GPAMQ9HCL2 828 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 NT5MQ9NPB1 228 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 ABT1Q9ULW3 272 aaKnown RBP9.31□□□□□ -0.92
HPS4-208ENST00000464362 NR5A2O00482 541 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 SCAMP3O14828 347 aaKnown RBP9.31□□□□□ -0.92
HPS4-208ENST00000464362 IRF6O14896 467 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 TIMM44O43615 452 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 TRUB2O95900 331 aaKnown RBP9.31□□□□□ -0.92
HPS4-208ENST00000464362 IRF1P10914 325 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 GRK2P25098 689 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 MAP4P27816 1152 aaKnown RBP9.31□□□□□ -0.92
HPS4-208ENST00000464362 PCSK1P29120 753 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 GALNTL6Q49A17 601 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 ZNF470Q6ECI4 717 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 MFSD5Q6N075 450 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 KCNMB4Q86W47 210 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 C2orf69Q8N8R5 385 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 RNF217Q8TC41 542 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 ASIC4Q96FT7 647 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 VPS50Q96JG6 964 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 DCUN1D5Q9BTE7 237 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 KLHL4Q9C0H6 718 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 CAB39LQ9H9S4 337 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 DDX43Q9NXZ2 648 aaKnown RBP9.31□□□□□ -0.92
HPS4-208ENST00000464362 CLIC5Q9NZA1 410 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.31□□□□□ -0.92
HPS4-208ENST00000464362 CHKBQ9Y259 395 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 DRG1Q9Y295 367 aaKnown RBP9.31□□□□□ -0.92
HPS4-208ENST00000464362 BCL9LQ86UU0 1499 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 SDK1Q7Z5N4 2213 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms