RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 FBXL13Q8NEE6 735 aa16.02■□□□□ 0.16
CMSS1-202ENST00000463526 CADM4Q8NFZ8 388 aa16.02■□□□□ 0.16
CMSS1-202ENST00000463526 CYB5D2Q8WUJ1 264 aa16.02■□□□□ 0.16
CMSS1-202ENST00000463526 EDEM1Q92611 657 aa16.02■□□□□ 0.16
CMSS1-202ENST00000463526 NUP58Q9BVL2 599 aa16.02■□□□□ 0.16
CMSS1-202ENST00000463526 UBXN6Q9BZV1 441 aa16.02■□□□□ 0.16
CMSS1-202ENST00000463526 ZDHHC5Q9C0B5 715 aa16.02■□□□□ 0.16
CMSS1-202ENST00000463526 GAREM1Q9H706 876 aa16.02■□□□□ 0.16
CMSS1-202ENST00000463526 SFMBT1Q9UHJ3 866 aa16.02■□□□□ 0.16
CMSS1-202ENST00000463526 EPB41P11171 864 aaKnown RBP16.01■□□□□ 0.15
CMSS1-202ENST00000463526 CD19P15391 556 aa16.01■□□□□ 0.15
CMSS1-202ENST00000463526 ZNF132P52740 706 aa16.01■□□□□ 0.15
CMSS1-202ENST00000463526 KRT85P78386 507 aa16.01■□□□□ 0.15
CMSS1-202ENST00000463526 PDE4CQ08493 712 aa16.01■□□□□ 0.15
CMSS1-202ENST00000463526 FNDC3BQ53EP0 1204 aaKnown RBP16.01■□□□□ 0.15
CMSS1-202ENST00000463526 TCERG1LQ5VWI1 586 aa16.01■□□□□ 0.15
CMSS1-202ENST00000463526 LRSAM1Q6UWE0 723 aa16.01■□□□□ 0.15
CMSS1-202ENST00000463526 KRBA2Q6ZNG9 492 aa16.01■□□□□ 0.15
CMSS1-202ENST00000463526 SLCO6A1Q86UG4 719 aa16.01■□□□□ 0.15
CMSS1-202ENST00000463526 CPXM2Q8N436 756 aa16.01■□□□□ 0.15
CMSS1-202ENST00000463526 TTC39CQ8N584 583 aa16.01■□□□□ 0.15
CMSS1-202ENST00000463526 UBA3Q8TBC4 463 aa16.01■□□□□ 0.15
CMSS1-202ENST00000463526 PLD4Q96BZ4 506 aa16.01■□□□□ 0.15
CMSS1-202ENST00000463526 LRRC4Q9HBW1 653 aa16.01■□□□□ 0.15
CMSS1-202ENST00000463526 ASPMQ8IZT6 3477 aa16.01■□□□□ 0.15
CMSS1-202ENST00000463526 PKD1L2Q7Z442 2459 aa16■□□□□ 0.15
CMSS1-202ENST00000463526 A0A1B0GVT2 93 aa16■□□□□ 0.15
CMSS1-202ENST00000463526 FAM221BA6H8Z2 402 aa16■□□□□ 0.15
CMSS1-202ENST00000463526 GOLGA8CPA6NN73 597 aa16■□□□□ 0.15
CMSS1-202ENST00000463526 CETN3O15182 167 aa16■□□□□ 0.15
CMSS1-202ENST00000463526 TIMM44O43615 452 aa16■□□□□ 0.15
CMSS1-202ENST00000463526 MATKP42679 507 aa16■□□□□ 0.15
CMSS1-202ENST00000463526 HARS2P49590 506 aaKnown RBP16■□□□□ 0.15
CMSS1-202ENST00000463526 CSNK1EP49674 416 aaKnown RBP16■□□□□ 0.15
CMSS1-202ENST00000463526 BNC1Q01954 994 aa16■□□□□ 0.15
CMSS1-202ENST00000463526 ENPEPQ07075 957 aa16■□□□□ 0.15
CMSS1-202ENST00000463526 EIF4HQ15056 248 aaKnown RBP16■□□□□ 0.15
CMSS1-202ENST00000463526 HLA-BQ31612 363 aa16■□□□□ 0.15
CMSS1-202ENST00000463526 ZCWPW2Q504Y3 356 aa16■□□□□ 0.15
CMSS1-202ENST00000463526 MPPE1Q53F39 396 aa16■□□□□ 0.15
CMSS1-202ENST00000463526 DCAF17Q5H9S7 520 aaPredicted RBP16■□□□□ 0.15
CMSS1-202ENST00000463526 C19orf48Q6RUI8 117 aa16■□□□□ 0.15
CMSS1-202ENST00000463526 CHST9Q7L1S5 443 aa16■□□□□ 0.15
CMSS1-202ENST00000463526 RBBP8NLQ8NC74 664 aaPredicted RBP16■□□□□ 0.15
CMSS1-202ENST00000463526 OR2T3Q8NH03 318 aa16■□□□□ 0.15
CMSS1-202ENST00000463526 RNF139Q8WU17 664 aa16■□□□□ 0.15
CMSS1-202ENST00000463526 ADAMTS14Q8WXS8 1223 aa16■□□□□ 0.15
CMSS1-202ENST00000463526 TMA16Q96EY4 203 aaKnown RBP16■□□□□ 0.15
CMSS1-202ENST00000463526 IPO9Q96P70 1041 aaKnown RBP16■□□□□ 0.15
CMSS1-202ENST00000463526 SLC2A11Q9BYW1 496 aa16■□□□□ 0.15
CMSS1-202ENST00000463526 LHX5Q9H2C1 402 aa16■□□□□ 0.15
CMSS1-202ENST00000463526 GOLPH3LQ9H4A5 285 aa16■□□□□ 0.15
CMSS1-202ENST00000463526 C6orf106Q9H6K1 298 aaPredicted RBP16■□□□□ 0.15
CMSS1-202ENST00000463526 TM7SF3Q9NS93 570 aa16■□□□□ 0.15
CMSS1-202ENST00000463526 HESX1Q9UBX0 185 aa16■□□□□ 0.15
CMSS1-202ENST00000463526 TSPAN16Q9UKR8 245 aa16■□□□□ 0.15
CMSS1-202ENST00000463526 PCOLCE2Q9UKZ9 415 aa16■□□□□ 0.15
CMSS1-202ENST00000463526 APOBEC2Q9Y235 224 aaKnown RBP16■□□□□ 0.15
CMSS1-202ENST00000463526 FNDC3AQ9Y2H6 1198 aaKnown RBP16■□□□□ 0.15
CMSS1-202ENST00000463526 SLCO1B1Q9Y6L6 691 aa16■□□□□ 0.15
CMSS1-202ENST00000463526 ATRXP46100 2492 aa16■□□□□ 0.15
CMSS1-202ENST00000463526 MSI1O43347 362 aaKnown RBP15.99■□□□□ 0.15
CMSS1-202ENST00000463526 STX10O60499 249 aa15.99■□□□□ 0.15
CMSS1-202ENST00000463526 CER1O95813 267 aa15.99■□□□□ 0.15
CMSS1-202ENST00000463526 HOXD9P28356 352 aaPredicted RBP15.99■□□□□ 0.15
CMSS1-202ENST00000463526 HLA-FP30511 346 aa15.99■□□□□ 0.15
CMSS1-202ENST00000463526 ADIGQ0VDE8 80 aa15.99■□□□□ 0.15
CMSS1-202ENST00000463526 LRMPQ12912 555 aa15.99■□□□□ 0.15
CMSS1-202ENST00000463526 E2F5Q15329 346 aa15.99■□□□□ 0.15
CMSS1-202ENST00000463526 TRIP4Q15650 581 aaPredicted RBP15.99■□□□□ 0.15
CMSS1-202ENST00000463526 SGO2Q562F6 1265 aa15.99■□□□□ 0.15
CMSS1-202ENST00000463526 BSPRYQ5W0U4 402 aa15.99■□□□□ 0.15
CMSS1-202ENST00000463526 PM20D1Q6GTS8 502 aa15.99■□□□□ 0.15
CMSS1-202ENST00000463526 BHLHA9Q7RTU4 235 aa15.99■□□□□ 0.15
CMSS1-202ENST00000463526 OLA1Q9NTK5 396 aaKnown RBP15.99■□□□□ 0.15
CMSS1-202ENST00000463526 ABCB8Q9NUT2 735 aa15.99■□□□□ 0.15
CMSS1-202ENST00000463526 PLA2G4CQ9UP65 541 aa15.99■□□□□ 0.15
CMSS1-202ENST00000463526 ZDHHC9Q9Y397 364 aa15.99■□□□□ 0.15
CMSS1-202ENST00000463526 NFE2L3Q9Y4A8 694 aa15.99■□□□□ 0.15
CMSS1-202ENST00000463526 KNL1Q8NG31 2342 aa15.99■□□□□ 0.15
CMSS1-202ENST00000463526 SPEGQ15772 3267 aa15.99■□□□□ 0.15
CMSS1-202ENST00000463526 FAM237AA0A1B0GTK4 181 aa15.98■□□□□ 0.15
CMSS1-202ENST00000463526 YJEFN3A6XGL0 299 aa15.98■□□□□ 0.15
CMSS1-202ENST00000463526 E7ENQ6 273 aa15.98■□□□□ 0.15
CMSS1-202ENST00000463526 PIK3R2O00459 728 aa15.98■□□□□ 0.15
CMSS1-202ENST00000463526 XPO1O14980 1071 aaKnown RBP15.98■□□□□ 0.15
CMSS1-202ENST00000463526 CBFA2T3O75081 653 aa15.98■□□□□ 0.15
CMSS1-202ENST00000463526 ZNF202O95125 648 aa15.98■□□□□ 0.15
CMSS1-202ENST00000463526 LCP1P13796 627 aa15.98■□□□□ 0.15
CMSS1-202ENST00000463526 ACSL1P33121 698 aa15.98■□□□□ 0.15
CMSS1-202ENST00000463526 BCAT1P54687 386 aa15.98■□□□□ 0.15
CMSS1-202ENST00000463526 EDRF1Q3B7T1 1238 aa15.98■□□□□ 0.15
CMSS1-202ENST00000463526 CBWD6Q4V339 395 aa15.98■□□□□ 0.15
CMSS1-202ENST00000463526 CBWD3Q5JTY5 395 aa15.98■□□□□ 0.15
CMSS1-202ENST00000463526 CBWD5Q5RIA9 395 aa15.98■□□□□ 0.15
CMSS1-202ENST00000463526 IL27RAQ6UWB1 636 aa15.98■□□□□ 0.15
CMSS1-202ENST00000463526 PROSER1Q86XN7 944 aa15.98■□□□□ 0.15
CMSS1-202ENST00000463526 FAM217AQ8IXS0 508 aa15.98■□□□□ 0.15
CMSS1-202ENST00000463526 SIX6OS1Q8N1H7 587 aa15.98■□□□□ 0.15
CMSS1-202ENST00000463526 RHBDD1Q8TEB9 315 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms