RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 SLC14A1Q13336 389 aa24.31■■□□□ 1.48
SSNA1-203ENST00000463511 ZNF423Q2M1K9 1284 aa24.31■■□□□ 1.48
SSNA1-203ENST00000463511 RAB44Q7Z6P3 723 aaPredicted RBP24.31■■□□□ 1.48
SSNA1-203ENST00000463511 FAM186BQ8IYM0 893 aa24.31■■□□□ 1.48
SSNA1-203ENST00000463511 EEF2KMTQ96G04 330 aa24.31■■□□□ 1.48
SSNA1-203ENST00000463511 GPR174Q9BXC1 333 aa24.31■■□□□ 1.48
SSNA1-203ENST00000463511 USP36Q9P275 1121 aaKnown RBP24.31■■□□□ 1.48
SSNA1-203ENST00000463511 RWDD2AQ9UIY3 292 aa24.31■■□□□ 1.48
SSNA1-203ENST00000463511 NCAM1P13591 858 aa24.3■■□□□ 1.48
SSNA1-203ENST00000463511 KRT13P13646 458 aa24.3■■□□□ 1.48
SSNA1-203ENST00000463511 CHKAP35790 457 aa24.3■■□□□ 1.48
SSNA1-203ENST00000463511 HNRNPDQ14103 355 aaKnown RBP24.3■■□□□ 1.48
SSNA1-203ENST00000463511 TRIP6Q15654 476 aaKnown RBP24.3■■□□□ 1.48
SSNA1-203ENST00000463511 CACUL1Q86Y37 369 aa24.3■■□□□ 1.48
SSNA1-203ENST00000463511 DENND1CQ8IV53 801 aa24.3■■□□□ 1.48
SSNA1-203ENST00000463511 NAXDQ8IW45 347 aa24.3■■□□□ 1.48
SSNA1-203ENST00000463511 ZCCHC9Q8N567 271 aaKnown RBP24.3■■□□□ 1.48
SSNA1-203ENST00000463511 CCDC150Q8NCX0 1101 aa24.3■■□□□ 1.48
SSNA1-203ENST00000463511 DCLK3Q9C098 648 aa24.3■■□□□ 1.48
SSNA1-203ENST00000463511 DNAI2Q9GZS0 605 aa24.3■■□□□ 1.48
SSNA1-203ENST00000463511 WSB2Q9NYS7 404 aaPredicted RBP24.3■■□□□ 1.48
SSNA1-203ENST00000463511 THAP10Q9P2Z0 257 aaPredicted RBP24.3■■□□□ 1.48
SSNA1-203ENST00000463511 NBEAQ8NFP9 2946 aa24.29■■□□□ 1.48
SSNA1-203ENST00000463511 KCNJ18B7U540 433 aa24.29■■□□□ 1.48
SSNA1-203ENST00000463511 HOXB3P14651 431 aaPredicted RBP24.29■■□□□ 1.48
SSNA1-203ENST00000463511 PSMC2P35998 433 aaKnown RBP24.29■■□□□ 1.48
SSNA1-203ENST00000463511 ANKS1BQ7Z6G8 1248 aa24.29■■□□□ 1.48
SSNA1-203ENST00000463511 METTL3Q86U44 580 aaKnown RBP24.29■■□□□ 1.48
SSNA1-203ENST00000463511 UCMAQ8WVF2 138 aa24.29■■□□□ 1.48
SSNA1-203ENST00000463511 HEXIM2Q96MH2 286 aaKnown RBP24.29■■□□□ 1.48
SSNA1-203ENST00000463511 MARCH2Q9P0N8 246 aa24.29■■□□□ 1.48
SSNA1-203ENST00000463511 AGO1Q9UL18 857 aaKnown RBP24.29■■□□□ 1.48
SSNA1-203ENST00000463511 CLEC4EQ9ULY5 219 aa24.29■■□□□ 1.48
SSNA1-203ENST00000463511 PCDHB9Q9Y5E1 797 aa24.29■■□□□ 1.48
SSNA1-203ENST00000463511 ADAMTS20P59510 1910 aa24.28■■□□□ 1.48
SSNA1-203ENST00000463511 A0A1B0GTW7 788 aa24.28■■□□□ 1.48
SSNA1-203ENST00000463511 FAM221BA6H8Z2 402 aa24.28■■□□□ 1.48
SSNA1-203ENST00000463511 NPC1O15118 1278 aa24.28■■□□□ 1.48
SSNA1-203ENST00000463511 SYNCRIPO60506 623 aaKnown RBP24.28■■□□□ 1.48
SSNA1-203ENST00000463511 TPMTP51580 245 aa24.28■■□□□ 1.48
SSNA1-203ENST00000463511 MCCD1P59942 119 aaPredicted RBP24.28■■□□□ 1.48
SSNA1-203ENST00000463511 ENPP2Q13822 863 aa24.28■■□□□ 1.48
SSNA1-203ENST00000463511 ZNF234Q14588 700 aa24.28■■□□□ 1.48
SSNA1-203ENST00000463511 RSRC2Q7L4I2 434 aaKnown RBP24.28■■□□□ 1.48
SSNA1-203ENST00000463511 TMPRSS6Q8IU80 811 aa24.28■■□□□ 1.48
SSNA1-203ENST00000463511 DNASE2BQ8WZ79 361 aa24.28■■□□□ 1.48
SSNA1-203ENST00000463511 SIPA1Q96FS4 1042 aa24.28■■□□□ 1.48
SSNA1-203ENST00000463511 PIWIL1Q96J94 861 aaKnown RBP24.28■■□□□ 1.48
SSNA1-203ENST00000463511 MIR1-1HGQ9H1L0 117 aa24.28■■□□□ 1.48
SSNA1-203ENST00000463511 TMEM8AQ9HCN3 771 aa24.28■■□□□ 1.48
SSNA1-203ENST00000463511 ITM2CQ9NQX7 267 aa24.28■■□□□ 1.48
SSNA1-203ENST00000463511 DACH1Q9UI36 760 aa24.28■■□□□ 1.48
SSNA1-203ENST00000463511 LETM1O95202 739 aaPredicted RBP24.27■■□□□ 1.48
SSNA1-203ENST00000463511 CYBBP04839 570 aa24.27■■□□□ 1.48
SSNA1-203ENST00000463511 FTH1P19P0C7X4 201 aa24.27■■□□□ 1.48
SSNA1-203ENST00000463511 PRKCHP24723 683 aa24.27■■□□□ 1.48
SSNA1-203ENST00000463511 ERCC5P28715 1186 aaPredicted RBP24.27■■□□□ 1.48
SSNA1-203ENST00000463511 ZNF132P52740 706 aa24.27■■□□□ 1.48
SSNA1-203ENST00000463511 RING1Q06587 406 aa24.27■■□□□ 1.48
SSNA1-203ENST00000463511 CT47A1Q5JQC4 288 aaPredicted RBP24.27■■□□□ 1.48
SSNA1-203ENST00000463511 DCAF12L1Q5VU92 463 aa24.27■■□□□ 1.48
SSNA1-203ENST00000463511 PIGZQ86VD9 579 aa24.27■■□□□ 1.48
SSNA1-203ENST00000463511 SORCS1Q8WY21 1168 aa24.27■■□□□ 1.48
SSNA1-203ENST00000463511 SEMA4DQ92854 862 aa24.27■■□□□ 1.48
SSNA1-203ENST00000463511 CEP63Q96MT8 703 aa24.27■■□□□ 1.48
SSNA1-203ENST00000463511 ZDHHC5Q9C0B5 715 aa24.27■■□□□ 1.48
SSNA1-203ENST00000463511 CIPCQ9C0C6 399 aa24.27■■□□□ 1.48
SSNA1-203ENST00000463511 ANO10Q9NW15 660 aa24.27■■□□□ 1.48
SSNA1-203ENST00000463511 ELOVL2Q9NXB9 296 aa24.27■■□□□ 1.48
SSNA1-203ENST00000463511 STRIP2Q9ULQ0 834 aa24.27■■□□□ 1.48
SSNA1-203ENST00000463511 NFE2L3Q9Y4A8 694 aa24.27■■□□□ 1.48
SSNA1-203ENST00000463511 SLC12A8A0AV02 714 aa24.26■■□□□ 1.47
SSNA1-203ENST00000463511 COPAP53621 1224 aa24.26■■□□□ 1.47
SSNA1-203ENST00000463511 YWHAGP61981 247 aaKnown RBP eCLIP24.26■■□□□ 1.47
SSNA1-203ENST00000463511 TYRO3Q06418 890 aa24.26■■□□□ 1.47
SSNA1-203ENST00000463511 STX1AQ16623 288 aa24.26■■□□□ 1.47
SSNA1-203ENST00000463511 ARHGAP18Q8N392 663 aa24.26■■□□□ 1.47
SSNA1-203ENST00000463511 CPXM2Q8N436 756 aa24.26■■□□□ 1.47
SSNA1-203ENST00000463511 PNPLA1Q8N8W4 532 aa24.26■■□□□ 1.47
SSNA1-203ENST00000463511 SLC4A11Q8NBS3 891 aa24.26■■□□□ 1.47
SSNA1-203ENST00000463511 CADM4Q8NFZ8 388 aa24.26■■□□□ 1.47
SSNA1-203ENST00000463511 DDI1Q8WTU0 396 aa24.26■■□□□ 1.47
SSNA1-203ENST00000463511 PRCCQ92733 491 aaPredicted RBP24.26■■□□□ 1.47
SSNA1-203ENST00000463511 ARID3AQ99856 593 aa24.26■■□□□ 1.47
SSNA1-203ENST00000463511 SRRTQ9BXP5 876 aaKnown RBP24.26■■□□□ 1.47
SSNA1-203ENST00000463511 CISHQ9NSE2 258 aa24.26■■□□□ 1.47
SSNA1-203ENST00000463511 ITPR1Q14643 2758 aa24.25■■□□□ 1.47
SSNA1-203ENST00000463511 SLC16A3O15427 465 aaKnown RBP24.25■■□□□ 1.47
SSNA1-203ENST00000463511 EPHX1P07099 455 aa24.25■■□□□ 1.47
SSNA1-203ENST00000463511 EPB41P11171 864 aaKnown RBP24.25■■□□□ 1.47
SSNA1-203ENST00000463511 RAD23BP54727 409 aa24.25■■□□□ 1.47
SSNA1-203ENST00000463511 ENPEPQ07075 957 aa24.25■■□□□ 1.47
SSNA1-203ENST00000463511 COL9A2Q14055 689 aaPredicted RBP24.25■■□□□ 1.47
SSNA1-203ENST00000463511 EIF4HQ15056 248 aaKnown RBP24.25■■□□□ 1.47
SSNA1-203ENST00000463511 RAB41Q5JT25 222 aa24.25■■□□□ 1.47
SSNA1-203ENST00000463511 TMEM215Q68D42 235 aa24.25■■□□□ 1.47
SSNA1-203ENST00000463511 KRT39Q6A163 491 aa24.25■■□□□ 1.47
SSNA1-203ENST00000463511 C11orf57Q6ZUT1 292 aaPredicted RBP24.25■■□□□ 1.47
SSNA1-203ENST00000463511 ADAMTS14Q8WXS8 1223 aa24.25■■□□□ 1.47
SSNA1-203ENST00000463511 TMEM176AQ96HP8 235 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms