RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 SCYL2Q6P3W7 929 aa14.41□□□□□ -0.1
PHACTR4-203ENST00000463428 SND1Q7KZF4 910 aaKnown RBP eCLIP14.41□□□□□ -0.1
PHACTR4-203ENST00000463428 NT5DC3Q86UY8 548 aa14.41□□□□□ -0.1
PHACTR4-203ENST00000463428 DDX42Q86XP3 938 aaKnown RBP eCLIP14.41□□□□□ -0.1
PHACTR4-203ENST00000463428 UNC45BQ8IWX7 931 aa14.41□□□□□ -0.1
PHACTR4-203ENST00000463428 MAGEB5Q9BZ81 275 aa14.41□□□□□ -0.1
PHACTR4-203ENST00000463428 PLA2G2FQ9BZM2 168 aa14.41□□□□□ -0.1
PHACTR4-203ENST00000463428 TKTL2Q9H0I9 626 aa14.41□□□□□ -0.1
PHACTR4-203ENST00000463428 CFAP97Q9P2B7 532 aa14.41□□□□□ -0.1
PHACTR4-203ENST00000463428 PCSK1NQ9UHG2 260 aa14.41□□□□□ -0.1
PHACTR4-203ENST00000463428 XPO7Q9UIA9 1087 aaKnown RBP14.41□□□□□ -0.1
PHACTR4-203ENST00000463428 STOML2Q9UJZ1 356 aa14.41□□□□□ -0.1
PHACTR4-203ENST00000463428 FZD10Q9ULW2 581 aa14.41□□□□□ -0.1
PHACTR4-203ENST00000463428 HEPACAM2A8MVW5 462 aa14.41□□□□□ -0.1
PHACTR4-203ENST00000463428 C2CD4DB7Z1M9 353 aa14.41□□□□□ -0.1
PHACTR4-203ENST00000463428 ANHXE9PGG2 379 aa14.41□□□□□ -0.1
PHACTR4-203ENST00000463428 SLC2A3P11169 496 aa14.41□□□□□ -0.1
PHACTR4-203ENST00000463428 CORO1AP31146 461 aaKnown RBP14.41□□□□□ -0.1
PHACTR4-203ENST00000463428 SCAPQ12770 1279 aa14.41□□□□□ -0.1
PHACTR4-203ENST00000463428 ATP13A4Q4VNC1 1196 aa14.41□□□□□ -0.1
PHACTR4-203ENST00000463428 PARM1Q6UWI2 310 aa14.41□□□□□ -0.1
PHACTR4-203ENST00000463428 KIAA1958Q8N8K9 716 aa14.41□□□□□ -0.1
PHACTR4-203ENST00000463428 FGF14Q92915 247 aa14.41□□□□□ -0.1
PHACTR4-203ENST00000463428 RNF34Q969K3 372 aa14.41□□□□□ -0.1
PHACTR4-203ENST00000463428 ACSF2Q96CM8 615 aaPredicted RBP14.41□□□□□ -0.1
PHACTR4-203ENST00000463428 SNRNP25Q9BV90 132 aaKnown RBP14.41□□□□□ -0.1
PHACTR4-203ENST00000463428 DCLK3Q9C098 648 aa14.41□□□□□ -0.1
PHACTR4-203ENST00000463428 ZFP14Q9HCL3 533 aa14.41□□□□□ -0.1
PHACTR4-203ENST00000463428 AGO1Q9UL18 857 aaKnown RBP14.41□□□□□ -0.1
PHACTR4-203ENST00000463428 MYOFQ9NZM1 2061 aa14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 GFRA2O00451 464 aa14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 PRPSAP2O60256 369 aa14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 ACSL4O60488 711 aa14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 PAGE1O75459 146 aa14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 LATS1O95835 1130 aa14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 APOEP02649 317 aa14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 RARAP10276 462 aa14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 HARS2P49590 506 aaKnown RBP14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 AIF1P55008 147 aa14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 MLLT6P55198 1093 aaPredicted RBP14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 BOLA3Q53S33 107 aa14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 ERMARDQ5T6L9 678 aa14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 LRRC38Q5VT99 294 aa14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 NADSYN1Q6IA69 706 aa14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 VITQ6UXI7 678 aa14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 DENND1CQ8IV53 801 aa14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 FAM217AQ8IXS0 508 aa14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 ZDHHC14Q8IZN3 488 aa14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 SYCE1Q8N0S2 351 aa14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 ATP6V0D2Q8N8Y2 350 aa14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 ST13P5Q8NFI4 369 aaPredicted RBP14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 TRIM58Q8NG06 486 aa14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 BPIFB1Q8TDL5 484 aa14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 E2F7Q96AV8 911 aa14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 ELSPBP1Q96BH3 223 aa14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 BTN2A3PQ96KV6 586 aa14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 HAPLN3Q96S86 360 aa14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 RPP25Q9BUL9 199 aaKnown RBP14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 THEGQ9P2T0 379 aa14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 SH3BP1Q9Y3L3 701 aa14.4□□□□□ -0.1
PHACTR4-203ENST00000463428 DOCK4Q8N1I0 1966 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 SPOPO43791 374 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 ECI2O75521 394 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 FTCDO95954 541 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 MOCS2O96007 188 aaPredicted RBP14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 SP100P23497 879 aaPredicted RBP14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 CTNNA2P26232 953 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 PEX5P50542 639 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 ARSEP51690 589 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 MTA1Q13330 715 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 HTR4Q13639 388 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 CA9Q16790 459 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 HADHQ16836 314 aaKnown RBP14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 ARL13BQ3SXY8 428 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 FAM133BQ5BKY9 247 aaKnown RBP14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 MS4A13Q5J8X5 152 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 KCNT1Q5JUK3 1230 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 MEI1Q5TIA1 1274 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 PIK3R6Q5UE93 754 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 POLNQ7Z5Q5 900 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 ZSCAN30Q86W11 494 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 PSTKQ8IV42 348 aaKnown RBP14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 MFSD6LQ8IWD5 586 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 BBS7Q8IWZ6 715 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 RHOT1Q8IXI2 618 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 ZNF683Q8IZ20 524 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 PLCD3Q8N3E9 789 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 TDRD5Q8NAT2 981 aaKnown RBP14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 FAM71BQ8TC56 605 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 TEKT4Q8WW24 435 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 KRT35Q92764 455 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 RPGRIP1Q96KN7 1286 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 C1orf74Q96LT6 269 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 PRMT1Q99873 361 aaKnown RBP14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 OSBPL2Q9H1P3 480 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 LINC00597Q9H2U6 94 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 ZWILCHQ9H900 591 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 GPATCH2LQ9NWQ4 482 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 SLC12A6Q9UHW9 1150 aa14.39□□□□□ -0.11
PHACTR4-203ENST00000463428 FAM50BQ9Y247 325 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms