RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 TATDN1Q6P1N9 297 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 MTSS1LQ765P7 747 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 HORMAD1Q86X24 394 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 LZTR1Q8N653 840 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 FAR2Q96K12 515 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 ZFP42Q96MM3 310 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 ZCCHC2Q9C0B9 1178 aaKnown RBP13.15□□□□□ -0.3
NUP58-206ENST00000463407 SYTL2Q9HCH5 934 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 UTP6Q9NYH9 597 aaKnown RBP13.15□□□□□ -0.3
NUP58-206ENST00000463407 H2AFY2Q9P0M6 372 aaPredicted RBP13.15□□□□□ -0.3
NUP58-206ENST00000463407 RAB23Q9ULC3 237 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 VGLL3A8MV65 326 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 NDUFB5O43674 189 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 MTA2O94776 668 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 PGS1Q32NB8 556 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 DCLRE1AQ6PJP8 1040 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 CMTM5Q96DZ9 223 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 GIT1Q9Y2X7 761 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 AKAP10O43572 662 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 RARGP13631 454 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 PRLRP16471 622 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 PTPN3P26045 913 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 PRIM2P49643 509 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 NCKAP1LP55160 1127 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 CCNG2Q16589 344 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 SETMARQ53H47 684 aaPredicted RBP13.15□□□□□ -0.3
NUP58-206ENST00000463407 CBWD3Q5JTY5 395 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 CBWD5Q5RIA9 395 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 C11orf74Q86VG3 221 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 ZNF557Q8N988 423 aaPredicted RBP13.15□□□□□ -0.3
NUP58-206ENST00000463407 ZNF555Q8NEP9 628 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 MYLPFQ96A32 169 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 TMEM159Q96B96 161 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 PLEKHA8Q96JA3 519 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 SLC28A3Q9HAS3 691 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 CYP3A7-CYP3A51PA0A087WV96 503 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 PSMD12O00232 456 aaPredicted RBP13.15□□□□□ -0.3
NUP58-206ENST00000463407 CTSEP14091 401 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 CYP3A7P24462 503 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 DENND1CQ8IV53 801 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 TNIP2Q8NFZ5 429 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 DUSP9Q99956 384 aaKnown RBP13.15□□□□□ -0.3
NUP58-206ENST00000463407 GPAMQ9HCL2 828 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 MAP10Q9P2G4 905 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 APPL1Q9UKG1 709 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 F8W810 466 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 TCN1P20061 433 aaPredicted RBP13.15□□□□□ -0.3
NUP58-206ENST00000463407 POLR2LP62875 67 aaKnown RBP13.15□□□□□ -0.3
NUP58-206ENST00000463407 IRAK1BP1Q5VVH5 260 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 C18orf25Q96B23 403 aaPredicted RBP13.15□□□□□ -0.3
NUP58-206ENST00000463407 TUBGCP3Q96CW5 907 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 ERP27Q96DN0 273 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 CCDC126Q96EE4 140 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 CTNNAL1Q9UBT7 734 aa13.15□□□□□ -0.3
NUP58-206ENST00000463407 MYOM1P52179 1685 aa13.15□□□□□ -0.31
NUP58-206ENST00000463407 SKAP2O75563 359 aaPredicted RBP13.14□□□□□ -0.31
NUP58-206ENST00000463407 SEC24DO94855 1032 aaPredicted RBP13.14□□□□□ -0.31
NUP58-206ENST00000463407 GUCA1CO95843 209 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 SPATA31D3P0C874 917 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 CYP2A7P20853 494 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 MAPK1P28482 360 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 TNFSF9P41273 254 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 CSHL1Q14406 222 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 SPATA31D4Q6ZUB0 917 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 ZNF614Q8N883 585 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 CATSPER1Q8NEC5 780 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 MDM1Q8TC05 714 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 CXorf40AQ8TE69 158 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 TBCBQ99426 244 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 TBL1YQ9BQ87 522 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 ATP9AO75110 1047 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 FGBP02675 491 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 CSH1P0DML2 217 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 CSH2P0DML3 217 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 RPL9P32969 192 aaKnown RBP13.14□□□□□ -0.31
NUP58-206ENST00000463407 DLG4P78352 724 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 PLIN5Q00G26 463 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 GRIK3Q13003 919 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 DUSP28Q4G0W2 176 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 ARMC12Q5T9G4 340 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 RAP1GAP2Q684P5 730 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 UNC93AQ86WB7 457 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 GRIN3AQ8TCU5 1115 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 PABPC3Q9H361 631 aaKnown RBP13.14□□□□□ -0.31
NUP58-206ENST00000463407 NDOR1Q9UHB4 597 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 TNNI3P19429 210 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 CBWD6Q4V339 395 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 PAPD7Q5XG87 772 aaKnown RBP13.14□□□□□ -0.31
NUP58-206ENST00000463407 LRRC6Q86X45 466 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 NLNQ9BYT8 704 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 CDT1Q9H211 546 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 TBL1XO60907 577 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 OR56A5P0C7T3 313 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 SELPP16109 830 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 BOP1Q14137 746 aaKnown RBP13.14□□□□□ -0.31
NUP58-206ENST00000463407 ILKAPQ9H0C8 392 aaPredicted RBP13.14□□□□□ -0.31
NUP58-206ENST00000463407 SLIT3O75094 1523 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 FAM47E-STBD1D6RA91 191 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 AGRPO00253 132 aa13.14□□□□□ -0.31
NUP58-206ENST00000463407 NPR3P17342 541 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms