RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 EIF4EBP2Q13542 120 aaPredicted RBP13.59□□□□□ -0.23
R3HDM1-213ENST00000463230 RNF43Q68DV7 783 aa13.59□□□□□ -0.23
R3HDM1-213ENST00000463230 NAIF1Q69YI7 327 aaPredicted RBP13.59□□□□□ -0.23
R3HDM1-213ENST00000463230 SLC8A2Q9UPR5 921 aa13.59□□□□□ -0.23
R3HDM1-213ENST00000463230 K7ESF4 209 aa13.59□□□□□ -0.23
R3HDM1-213ENST00000463230 TRUB2O95900 331 aaKnown RBP13.59□□□□□ -0.23
R3HDM1-213ENST00000463230 CHRNB2P17787 502 aa13.59□□□□□ -0.23
R3HDM1-213ENST00000463230 MATKP42679 507 aa13.59□□□□□ -0.23
R3HDM1-213ENST00000463230 DGKGP49619 791 aa13.59□□□□□ -0.23
R3HDM1-213ENST00000463230 ACBD5Q5T8D3 534 aaPredicted RBP13.59□□□□□ -0.23
R3HDM1-213ENST00000463230 SYPL2Q5VXT5 272 aa13.59□□□□□ -0.23
R3HDM1-213ENST00000463230 TPGS1Q6ZTW0 290 aa13.59□□□□□ -0.23
R3HDM1-213ENST00000463230 RPLP0P6Q8NHW5 317 aa13.59□□□□□ -0.23
R3HDM1-213ENST00000463230 BAP1Q92560 729 aa13.59□□□□□ -0.23
R3HDM1-213ENST00000463230 NUCKS1Q9H1E3 243 aaKnown RBP13.59□□□□□ -0.23
R3HDM1-213ENST00000463230 TSPY26PQ9H489 355 aa13.59□□□□□ -0.23
R3HDM1-213ENST00000463230 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.59□□□□□ -0.23
R3HDM1-213ENST00000463230 TJP2Q9UDY2 1190 aa13.59□□□□□ -0.23
R3HDM1-213ENST00000463230 SLC12A6Q9UHW9 1150 aa13.59□□□□□ -0.23
R3HDM1-213ENST00000463230 STAP1Q9ULZ2 295 aa13.59□□□□□ -0.23
R3HDM1-213ENST00000463230 MMP17Q9ULZ9 603 aa13.59□□□□□ -0.23
R3HDM1-213ENST00000463230 PAXBP1Q9Y5B6 917 aa13.59□□□□□ -0.23
R3HDM1-213ENST00000463230 TBC1D3BA6NDS4 549 aa13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 TPM3P06753 285 aa13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 CISD3P0C7P0 127 aa13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 MMP8P22894 467 aa13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 KDSRQ06136 332 aa13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 DCAF6Q58WW2 860 aa13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 EOGTQ5NDL2 527 aa13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 NAA35Q5VZE5 725 aa13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 LRSAM1Q6UWE0 723 aa13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 WDR5BQ86VZ2 330 aa13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 LONP2Q86WA8 852 aa13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 XYLT1Q86Y38 959 aa13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 DEFB106AQ8N104 65 aa13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 ATP6V0D2Q8N8Y2 350 aa13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 SLC20A1Q8WUM9 679 aa13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 ATRIPQ8WXE1 791 aa13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 PGAP3Q96FM1 320 aaPredicted RBP13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 BTN2A3PQ96KV6 586 aa13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 NAP1L5Q96NT1 182 aaPredicted RBP13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 FAM204AQ9H8W3 233 aa13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 A0A1W2PQJ5 194 aa13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 TYW5A2RUC4 315 aaKnown RBP13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 F9P00740 461 aa13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 KIR2DL1P43626 348 aaPredicted RBP13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 CENPCQ03188 943 aa13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 EIF4HQ15056 248 aaKnown RBP13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 NFKBIBQ15653 356 aa13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 PHF13Q86YI8 300 aaPredicted RBP13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 HJURPQ8NCD3 748 aaPredicted RBP13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 WFIKKN2Q8TEU8 576 aa13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 TMA16Q96EY4 203 aaKnown RBP13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 PIWIL1Q96J94 861 aaKnown RBP13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 AGPAT1Q99943 283 aa13.58□□□□□ -0.24
R3HDM1-213ENST00000463230 TIMM44O43615 452 aa13.57□□□□□ -0.24
R3HDM1-213ENST00000463230 APBB3O95704 486 aa13.57□□□□□ -0.24
R3HDM1-213ENST00000463230 CALB1P05937 261 aa13.57□□□□□ -0.24
R3HDM1-213ENST00000463230 UNGP13051 313 aaPredicted RBP13.57□□□□□ -0.24
R3HDM1-213ENST00000463230 CCR1P32246 355 aa13.57□□□□□ -0.24
R3HDM1-213ENST00000463230 PBX1P40424 430 aa13.57□□□□□ -0.24
R3HDM1-213ENST00000463230 UBASH3AP57075 661 aa13.57□□□□□ -0.24
R3HDM1-213ENST00000463230 CLEC16AQ2KHT3 1053 aa13.57□□□□□ -0.24
R3HDM1-213ENST00000463230 C10orf76Q5T2E6 689 aa13.57□□□□□ -0.24
R3HDM1-213ENST00000463230 NAT16Q8N8M0 369 aa13.57□□□□□ -0.24
R3HDM1-213ENST00000463230 DDI1Q8WTU0 396 aa13.57□□□□□ -0.24
R3HDM1-213ENST00000463230 NKD2Q969F2 451 aaPredicted RBP13.57□□□□□ -0.24
R3HDM1-213ENST00000463230 NT5C3BQ969T7 300 aa13.57□□□□□ -0.24
R3HDM1-213ENST00000463230 NPY6RQ99463 290 aa13.57□□□□□ -0.24
R3HDM1-213ENST00000463230 TTYH3Q9C0H2 523 aa13.57□□□□□ -0.24
R3HDM1-213ENST00000463230 FAM86C1Q9NVL1 165 aa13.57□□□□□ -0.24
R3HDM1-213ENST00000463230 AIPL1Q9NZN9 384 aa13.57□□□□□ -0.24
R3HDM1-213ENST00000463230 HNRNPLP14866 589 aaKnown RBP eCLIP13.56□□□□□ -0.249e-14■■□□□ 13.7
R3HDM1-213ENST00000463230 NSFP46459 744 aaKnown RBP13.56□□□□□ -0.24
R3HDM1-213ENST00000463230 DGKEP52429 567 aa13.56□□□□□ -0.24
R3HDM1-213ENST00000463230 DMC1Q14565 340 aa13.56□□□□□ -0.24
R3HDM1-213ENST00000463230 TAF5Q15542 800 aa13.56□□□□□ -0.24
R3HDM1-213ENST00000463230 FAM133BQ5BKY9 247 aaKnown RBP13.56□□□□□ -0.24
R3HDM1-213ENST00000463230 BRMS1LQ5PSV4 323 aa13.56□□□□□ -0.24
R3HDM1-213ENST00000463230 FAM102AQ5T9C2 384 aaPredicted RBP13.56□□□□□ -0.24
R3HDM1-213ENST00000463230 PIK3R6Q5UE93 754 aa13.56□□□□□ -0.24
R3HDM1-213ENST00000463230 TTC39BQ5VTQ0 682 aaPredicted RBP13.56□□□□□ -0.24
R3HDM1-213ENST00000463230 PKN3Q6P5Z2 889 aa13.56□□□□□ -0.24
R3HDM1-213ENST00000463230 ANKS1BQ7Z6G8 1248 aa13.56□□□□□ -0.24
R3HDM1-213ENST00000463230 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.56□□□□□ -0.24
R3HDM1-213ENST00000463230 UCMAQ8WVF2 138 aa13.56□□□□□ -0.24
R3HDM1-213ENST00000463230 DDIT4Q9NX09 232 aa13.56□□□□□ -0.24
R3HDM1-213ENST00000463230 EBF1Q9UH73 591 aa13.56□□□□□ -0.24
R3HDM1-213ENST00000463230 KCNU1A8MYU2 1149 aa13.56□□□□□ -0.24
R3HDM1-213ENST00000463230 CBFA2T2O43439 604 aa13.56□□□□□ -0.24
R3HDM1-213ENST00000463230 HOXD9P28356 352 aaPredicted RBP13.56□□□□□ -0.24
R3HDM1-213ENST00000463230 PRKCIP41743 596 aa13.56□□□□□ -0.24
R3HDM1-213ENST00000463230 ASIC2Q16515 512 aa13.56□□□□□ -0.24
R3HDM1-213ENST00000463230 SFMBT2Q5VUG0 894 aa13.56□□□□□ -0.24
R3HDM1-213ENST00000463230 IRF2BP2Q7Z5L9 587 aa13.56□□□□□ -0.24
R3HDM1-213ENST00000463230 CPA5Q8WXQ8 436 aa13.56□□□□□ -0.24
R3HDM1-213ENST00000463230 SYN2Q92777 582 aaPredicted RBP13.56□□□□□ -0.24
R3HDM1-213ENST00000463230 ANP32EQ9BTT0 268 aa13.56□□□□□ -0.24
R3HDM1-213ENST00000463230 EPC1Q9H2F5 836 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms