RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 UBL4BQ8N7F7 174 aa14.89□□□□□ -0.03
COL6A1-202ENST00000463060 EXD1Q8NHP7 514 aa14.89□□□□□ -0.03
COL6A1-202ENST00000463060 SUSD6Q92537 303 aa14.89□□□□□ -0.03
COL6A1-202ENST00000463060 RAPGEF5Q92565 580 aa14.89□□□□□ -0.03
COL6A1-202ENST00000463060 PLD4Q96BZ4 506 aa14.89□□□□□ -0.03
COL6A1-202ENST00000463060 TKTL2Q9H0I9 626 aa14.89□□□□□ -0.03
COL6A1-202ENST00000463060 ZWILCHQ9H900 591 aa14.89□□□□□ -0.03
COL6A1-202ENST00000463060 DDX56Q9NY93 547 aaKnown RBP14.89□□□□□ -0.03
COL6A1-202ENST00000463060 ARHGAP26Q9UNA1 814 aa14.89□□□□□ -0.03
COL6A1-202ENST00000463060 BRWD1Q9NSI6 2320 aa14.89□□□□□ -0.03
COL6A1-202ENST00000463060 GFRA2O00451 464 aa14.88□□□□□ -0.03
COL6A1-202ENST00000463060 CES2O00748 559 aa14.88□□□□□ -0.03
COL6A1-202ENST00000463060 KDELR1P24390 212 aa14.88□□□□□ -0.03
COL6A1-202ENST00000463060 MTHFRP42898 656 aa14.88□□□□□ -0.03
COL6A1-202ENST00000463060 CBX2Q14781 532 aaPredicted RBP14.88□□□□□ -0.03
COL6A1-202ENST00000463060 SMTNL2Q2TAL5 461 aa14.88□□□□□ -0.03
COL6A1-202ENST00000463060 CES5AQ6NT32 575 aa14.88□□□□□ -0.03
COL6A1-202ENST00000463060 Q6ZNB5 142 aa14.88□□□□□ -0.03
COL6A1-202ENST00000463060 VSIG1Q86XK7 387 aa14.88□□□□□ -0.03
COL6A1-202ENST00000463060 ZNF683Q8IZ20 524 aa14.88□□□□□ -0.03
COL6A1-202ENST00000463060 RCOR2Q8IZ40 523 aa14.88□□□□□ -0.03
COL6A1-202ENST00000463060 MICALL1Q8N3F8 863 aa14.88□□□□□ -0.03
COL6A1-202ENST00000463060 RIN3Q8TB24 985 aa14.88□□□□□ -0.03
COL6A1-202ENST00000463060 ING5Q8WYH8 240 aa14.88□□□□□ -0.03
COL6A1-202ENST00000463060 TSC1Q92574 1164 aa14.88□□□□□ -0.03
COL6A1-202ENST00000463060 FGF13Q92913 245 aa14.88□□□□□ -0.03
COL6A1-202ENST00000463060 USP13Q92995 863 aaPredicted RBP14.88□□□□□ -0.03
COL6A1-202ENST00000463060 C1orf74Q96LT6 269 aa14.88□□□□□ -0.03
COL6A1-202ENST00000463060 OSBPL9Q96SU4 736 aa14.88□□□□□ -0.03
COL6A1-202ENST00000463060 CARD9Q9H257 536 aa14.88□□□□□ -0.03
COL6A1-202ENST00000463060 TRPV4Q9HBA0 871 aa14.88□□□□□ -0.03
COL6A1-202ENST00000463060 PCDH18Q9HCL0 1135 aa14.88□□□□□ -0.03
COL6A1-202ENST00000463060 GPATCH2LQ9NWQ4 482 aa14.88□□□□□ -0.03
COL6A1-202ENST00000463060 XPO7Q9UIA9 1087 aaKnown RBP14.88□□□□□ -0.03
COL6A1-202ENST00000463060 STOML2Q9UJZ1 356 aa14.88□□□□□ -0.03
COL6A1-202ENST00000463060 AP4E1Q9UPM8 1137 aa14.88□□□□□ -0.03
COL6A1-202ENST00000463060 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.88□□□□□ -0.03
COL6A1-202ENST00000463060 CPQQ9Y646 472 aa14.88□□□□□ -0.03
COL6A1-202ENST00000463060 ZNF487B1APH4 448 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 FAM72CH0Y354 149 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 KCNK3O14649 394 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 PAGE1O75459 146 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 ZRANB2O95218 330 aaKnown RBP eCLIP14.87□□□□□ -0.03
COL6A1-202ENST00000463060 PRAMEF12O95522 483 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 CKMP06732 381 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 HMBSP08397 361 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 CD48P09326 243 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 NRG1Q02297 640 aaPredicted RBP14.87□□□□□ -0.03
COL6A1-202ENST00000463060 PDK2Q15119 407 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 ARL13BQ3SXY8 428 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 FAM72AQ5TYM5 149 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 PIK3R6Q5UE93 754 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 MANEALQ5VSG8 457 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 NUGGCQ68CJ6 796 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 FAM72DQ6L9T8 149 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 HTR3DQ70Z44 454 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 FAM72BQ86X60 149 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 ARID3BQ8IVW6 561 aaPredicted RBP14.87□□□□□ -0.03
COL6A1-202ENST00000463060 UNC45BQ8IWX7 931 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 PYROXD2Q8N2H3 581 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 RASGEF1CQ8N431 466 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 KIF18AQ8NI77 898 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 COG1Q8WTW3 980 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 RNF34Q969K3 372 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 ACSF2Q96CM8 615 aaPredicted RBP14.87□□□□□ -0.03
COL6A1-202ENST00000463060 FAF2Q96CS3 445 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 PBKQ96KB5 322 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 BTN2A3PQ96KV6 586 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 RIPOR3Q96MK2 946 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 KCTD15Q96SI1 283 aaPredicted RBP14.87□□□□□ -0.03
COL6A1-202ENST00000463060 PRMT1Q99873 361 aaKnown RBP14.87□□□□□ -0.03
COL6A1-202ENST00000463060 NACA2Q9H009 215 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 UBE2ZQ9H832 354 aaPredicted RBP14.87□□□□□ -0.03
COL6A1-202ENST00000463060 TDP1Q9NUW8 608 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 SMPD4Q9NXE4 827 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 GDE1Q9NZC3 331 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 CD207Q9UJ71 328 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 CCL26Q9Y258 94 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 COL6A3P12111 3177 aa14.87□□□□□ -0.03
COL6A1-202ENST00000463060 DENND4AQ7Z401 1863 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 HELZP42694 1942 aaKnown RBP14.86□□□□□ -0.03
COL6A1-202ENST00000463060 PI4K2BG5E9Z4 385 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 LEFTY2O00292 366 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 LATS1O95835 1130 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 FOSL2P15408 326 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 TCP1P17987 556 aaKnown RBP14.86□□□□□ -0.03
COL6A1-202ENST00000463060 CXCR5P32302 372 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 PTPN7P35236 360 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 GJC1P36383 396 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 CDKN2BP42772 138 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 HCAR3P49019 387 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 COPS2P61201 443 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 MTA1Q13330 715 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 ZNF211Q13398 564 aaPredicted RBP14.86□□□□□ -0.03
COL6A1-202ENST00000463060 DPYSL3Q14195 570 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 CCDC85BQ15834 202 aaPredicted RBP14.86□□□□□ -0.03
COL6A1-202ENST00000463060 ACBD5Q5T8D3 534 aaPredicted RBP14.86□□□□□ -0.03
COL6A1-202ENST00000463060 NADSYN1Q6IA69 706 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 AADACL2Q6P093 401 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 MFSD7Q6UXD7 560 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms