RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 PHOX2BQ99453 314 aa16.48■□□□□ 0.23
ERCC3-206ENST00000462306 ADAM33Q9BZ11 813 aa16.48■□□□□ 0.23
ERCC3-206ENST00000462306 AIPL1Q9NZN9 384 aa16.48■□□□□ 0.23
ERCC3-206ENST00000462306 TMEM59LQ9UK28 342 aa16.48■□□□□ 0.23
ERCC3-206ENST00000462306 ATG2BQ96BY7 2078 aa16.47■□□□□ 0.23
ERCC3-206ENST00000462306 GOLGA6L7A0A1B0GV03 622 aa16.47■□□□□ 0.23
ERCC3-206ENST00000462306 TBC1D3BA6NDS4 549 aa16.47■□□□□ 0.23
ERCC3-206ENST00000462306 TSPAN3O60637 253 aa16.47■□□□□ 0.23
ERCC3-206ENST00000462306 ATG13O75143 517 aa16.47■□□□□ 0.23
ERCC3-206ENST00000462306 HOXC13P31276 330 aa16.47■□□□□ 0.23
ERCC3-206ENST00000462306 SLC6A4P31645 630 aa16.47■□□□□ 0.23
ERCC3-206ENST00000462306 NBL1P41271 181 aa16.47■□□□□ 0.23
ERCC3-206ENST00000462306 KIR2DL1P43626 348 aaPredicted RBP16.47■□□□□ 0.23
ERCC3-206ENST00000462306 DGKGP49619 791 aa16.47■□□□□ 0.23
ERCC3-206ENST00000462306 SEC13P55735 322 aa16.47■□□□□ 0.23
ERCC3-206ENST00000462306 RNASE9P60153 205 aaKnown RBP16.47■□□□□ 0.23
ERCC3-206ENST00000462306 PREPLQ4J6C6 727 aaPredicted RBP16.47■□□□□ 0.23
ERCC3-206ENST00000462306 MPPE1Q53F39 396 aa16.47■□□□□ 0.23
ERCC3-206ENST00000462306 FAM102AQ5T9C2 384 aaPredicted RBP16.47■□□□□ 0.23
ERCC3-206ENST00000462306 EMC10Q5UCC4 262 aa16.47■□□□□ 0.23
ERCC3-206ENST00000462306 GRAMD4Q6IC98 578 aa16.47■□□□□ 0.23
ERCC3-206ENST00000462306 TRNP1Q6NT89 227 aa16.47■□□□□ 0.23
ERCC3-206ENST00000462306 RNF214Q8ND24 703 aa16.47■□□□□ 0.23
ERCC3-206ENST00000462306 CCDC26Q8TAB7 109 aa16.47■□□□□ 0.23
ERCC3-206ENST00000462306 DDI1Q8WTU0 396 aa16.47■□□□□ 0.23
ERCC3-206ENST00000462306 NT5C3BQ969T7 300 aa16.47■□□□□ 0.23
ERCC3-206ENST00000462306 NPY6RQ99463 290 aa16.47■□□□□ 0.23
ERCC3-206ENST00000462306 C11orf70Q9BRQ4 267 aa16.47■□□□□ 0.23
ERCC3-206ENST00000462306 NUP58Q9BVL2 599 aa16.47■□□□□ 0.23
ERCC3-206ENST00000462306 XPO4Q9C0E2 1151 aaKnown RBP16.47■□□□□ 0.23
ERCC3-206ENST00000462306 FAM204AQ9H8W3 233 aa16.47■□□□□ 0.23
ERCC3-206ENST00000462306 POLR3BQ9NW08 1133 aaPredicted RBP16.47■□□□□ 0.23
ERCC3-206ENST00000462306 DDIT4Q9NX09 232 aa16.47■□□□□ 0.23
ERCC3-206ENST00000462306 CALCOCO1Q9P1Z2 691 aa16.47■□□□□ 0.23
ERCC3-206ENST00000462306 XPO7Q9UIA9 1087 aaKnown RBP16.47■□□□□ 0.23
ERCC3-206ENST00000462306 CLEC4EQ9ULY5 219 aa16.47■□□□□ 0.23
ERCC3-206ENST00000462306 A0A1W2PQJ5 194 aa16.46■□□□□ 0.23
ERCC3-206ENST00000462306 KCNU1A8MYU2 1149 aa16.46■□□□□ 0.23
ERCC3-206ENST00000462306 GOLGA8SH3BPF8 625 aa16.46■□□□□ 0.23
ERCC3-206ENST00000462306 CYBBP04839 570 aa16.46■□□□□ 0.23
ERCC3-206ENST00000462306 TFE3P19532 575 aaPredicted RBP16.46■□□□□ 0.23
ERCC3-206ENST00000462306 HOXD9P28356 352 aaPredicted RBP16.46■□□□□ 0.23
ERCC3-206ENST00000462306 GBP1P32455 592 aa16.46■□□□□ 0.23
ERCC3-206ENST00000462306 FLT3P36888 993 aa16.46■□□□□ 0.23
ERCC3-206ENST00000462306 PRKCIP41743 596 aa16.46■□□□□ 0.23
ERCC3-206ENST00000462306 NSFP46459 744 aaKnown RBP16.46■□□□□ 0.23
ERCC3-206ENST00000462306 SGSHP51688 502 aa16.46■□□□□ 0.23
ERCC3-206ENST00000462306 MRPS21P82921 87 aaKnown RBP16.46■□□□□ 0.23
ERCC3-206ENST00000462306 ASIC2Q16515 512 aa16.46■□□□□ 0.23
ERCC3-206ENST00000462306 C2orf27AQ580R0 203 aa16.46■□□□□ 0.23
ERCC3-206ENST00000462306 C10orf76Q5T2E6 689 aa16.46■□□□□ 0.23
ERCC3-206ENST00000462306 PIK3R6Q5UE93 754 aa16.46■□□□□ 0.23
ERCC3-206ENST00000462306 SFMBT2Q5VUG0 894 aa16.46■□□□□ 0.23
ERCC3-206ENST00000462306 RNF43Q68DV7 783 aa16.46■□□□□ 0.23
ERCC3-206ENST00000462306 RFWD3Q6PCD5 774 aa16.46■□□□□ 0.23
ERCC3-206ENST00000462306 SYT13Q7L8C5 426 aa16.46■□□□□ 0.23
ERCC3-206ENST00000462306 ARCQ7LC44 396 aa16.46■□□□□ 0.23
ERCC3-206ENST00000462306 PHF13Q86YI8 300 aaPredicted RBP16.46■□□□□ 0.23
ERCC3-206ENST00000462306 FAM122AQ96E09 287 aa16.46■□□□□ 0.23
ERCC3-206ENST00000462306 TMA16Q96EY4 203 aaKnown RBP16.46■□□□□ 0.23
ERCC3-206ENST00000462306 MYEOVQ96EZ4 313 aa16.46■□□□□ 0.23
ERCC3-206ENST00000462306 IRX2Q9BZI1 471 aaPredicted RBP16.46■□□□□ 0.23
ERCC3-206ENST00000462306 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.46■□□□□ 0.23
ERCC3-206ENST00000462306 RRN3Q9NYV6 651 aa16.46■□□□□ 0.23
ERCC3-206ENST00000462306 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.46■□□□□ 0.23
ERCC3-206ENST00000462306 HCN2Q9UL51 889 aa16.46■□□□□ 0.23
ERCC3-206ENST00000462306 SLC27A6Q9Y2P4 619 aa16.46■□□□□ 0.23
ERCC3-206ENST00000462306 SYNJ2BP-COX16A0A087WUM0 186 aa16.45■□□□□ 0.22
ERCC3-206ENST00000462306 PRRT4C9JH25 899 aa16.45■□□□□ 0.22
ERCC3-206ENST00000462306 M0QYT0 321 aa16.45■□□□□ 0.22
ERCC3-206ENST00000462306 MOCS2O96007 188 aaPredicted RBP16.45■□□□□ 0.22
ERCC3-206ENST00000462306 APOEP02649 317 aa16.45■□□□□ 0.22
ERCC3-206ENST00000462306 HOXA6P31267 233 aa16.45■□□□□ 0.22
ERCC3-206ENST00000462306 PPP2R5DQ14738 602 aa16.45■□□□□ 0.22
ERCC3-206ENST00000462306 MON1BQ7L1V2 547 aa16.45■□□□□ 0.22
ERCC3-206ENST00000462306 IL17RCQ8NAC3 791 aa16.45■□□□□ 0.22
ERCC3-206ENST00000462306 ZBTB44Q8NCP5 570 aa16.45■□□□□ 0.22
ERCC3-206ENST00000462306 ACDQ96AP0 544 aa16.45■□□□□ 0.22
ERCC3-206ENST00000462306 BTN2A3PQ96KV6 586 aa16.45■□□□□ 0.22
ERCC3-206ENST00000462306 FAM126AQ9BYI3 521 aaPredicted RBP16.45■□□□□ 0.22
ERCC3-206ENST00000462306 SLC2A11Q9BYW1 496 aa16.45■□□□□ 0.22
ERCC3-206ENST00000462306 NUCKS1Q9H1E3 243 aaKnown RBP16.45■□□□□ 0.22
ERCC3-206ENST00000462306 HAUS4Q9H6D7 363 aa16.45■□□□□ 0.22
ERCC3-206ENST00000462306 SEPT11Q9NVA2 429 aaKnown RBP16.45■□□□□ 0.22
ERCC3-206ENST00000462306 ZSCAN32Q9NX65 697 aa16.45■□□□□ 0.22
ERCC3-206ENST00000462306 ADAM22Q9P0K1 906 aa16.45■□□□□ 0.22
ERCC3-206ENST00000462306 COX16Q9P0S2 106 aa16.45■□□□□ 0.22
ERCC3-206ENST00000462306 STARD13Q9Y3M8 1113 aa16.45■□□□□ 0.22
ERCC3-206ENST00000462306 R4GN57 208 aa16.45■□□□□ 0.22
ERCC3-206ENST00000462306 PROB1E7EW31 1015 aa16.44■□□□□ 0.22
ERCC3-206ENST00000462306 SLC2A3P11169 496 aa16.44■□□□□ 0.22
ERCC3-206ENST00000462306 TNFAIP3P21580 790 aa16.44■□□□□ 0.22
ERCC3-206ENST00000462306 CCR1P32246 355 aa16.44■□□□□ 0.22
ERCC3-206ENST00000462306 TIE1P35590 1138 aa16.44■□□□□ 0.22
ERCC3-206ENST00000462306 GSCP56915 257 aaPredicted RBP16.44■□□□□ 0.22
ERCC3-206ENST00000462306 DMWDQ09019 674 aa16.44■□□□□ 0.22
ERCC3-206ENST00000462306 NME3Q13232 169 aa16.44■□□□□ 0.22
ERCC3-206ENST00000462306 SLC25A52Q3SY17 297 aa16.44■□□□□ 0.22
ERCC3-206ENST00000462306 MS4A13Q5J8X5 152 aa16.44■□□□□ 0.22
ERCC3-206ENST00000462306 MPP7Q5T2T1 576 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms