RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 ZWILCHQ9H900 591 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 TRPV4Q9HBA0 871 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 TDP1Q9NUW8 608 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 OBP2AQ9NY56 170 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 STIM2Q9P246 746 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 STOML2Q9UJZ1 356 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 NUDT5Q9UKK9 219 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 AP4E1Q9UPM8 1137 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 PTPRDP23468 1912 aa11.07□□□□□ -0.64
RTF1-202ENST00000462276 VCANP13611 3396 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 SYNJ2BP-COX16A0A087WUM0 186 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 LRRD1A4D1F6 860 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 H3BRJ5 948 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 SLC9A3R1O14745 358 aaPredicted RBP11.06□□□□□ -0.64
RTF1-202ENST00000462276 LINC01565O15544 149 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 MSI1O43347 362 aaKnown RBP11.06□□□□□ -0.64
RTF1-202ENST00000462276 STC2O76061 302 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 TJP3O95049 919 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 ZFXP17010 805 aaPredicted RBP11.06□□□□□ -0.64
RTF1-202ENST00000462276 KDELR1P24390 212 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 LTBRP36941 435 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 ARL4AP40617 200 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 PAFAH1B1P43034 410 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 ARSEP51690 589 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 CYP4F8P98187 520 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 AMPD2Q01433 879 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 TFDP2Q14188 446 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 KRT81Q14533 505 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 SLC5A9Q2M3M2 681 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 TFDP3Q5H9I0 405 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 ADGRF1Q5T601 910 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 SEL1L2Q5TEA6 688 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 LRRC31Q6UY01 552 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 CYP4V2Q6ZWL3 525 aaPredicted RBP11.06□□□□□ -0.64
RTF1-202ENST00000462276 CELF5Q8N6W0 485 aaKnown RBP11.06□□□□□ -0.64
RTF1-202ENST00000462276 SMRP1Q8NCR6 262 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 ACTRT1Q8TDG2 376 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 ZNF592Q92610 1267 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 OTUB2Q96DC9 234 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 TCEAL4Q96EI5 215 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 SNRNP25Q9BV90 132 aaKnown RBP11.06□□□□□ -0.64
RTF1-202ENST00000462276 MAK16Q9BXY0 300 aaKnown RBP11.06□□□□□ -0.64
RTF1-202ENST00000462276 HOMER3Q9NSC5 361 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.06□□□□□ -0.64
RTF1-202ENST00000462276 COX16Q9P0S2 106 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 CALCOCO1Q9P1Z2 691 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 TBC1D14Q9P2M4 693 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 OR12D3Q9UGF7 316 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 CD207Q9UJ71 328 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 CDC23Q9UJX2 597 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 CDH7Q9ULB5 785 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 CPQQ9Y646 472 aa11.06□□□□□ -0.64
RTF1-202ENST00000462276 PRRC2BQ5JSZ5 2229 aaKnown RBP11.06□□□□□ -0.64
RTF1-202ENST00000462276 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.05□□□□□ -0.64
RTF1-202ENST00000462276 ACSL4O60488 711 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 TBX10O75333 385 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 PAGE1O75459 146 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 ZNF189O75820 626 aaPredicted RBP11.05□□□□□ -0.64
RTF1-202ENST00000462276 URI1O94763 535 aaPredicted RBP11.05□□□□□ -0.64
RTF1-202ENST00000462276 KRT1P04264 644 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 PYGMP11217 842 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 FOSL2P15408 326 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 CHKAP35790 457 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 ATXN1P54253 815 aaKnown RBP11.05□□□□□ -0.64
RTF1-202ENST00000462276 CDH6P55285 790 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 NTHL1P78549 312 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 CKAP4Q07065 602 aaKnown RBP11.05□□□□□ -0.64
RTF1-202ENST00000462276 WHAMMP3Q1A5X7 153 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 PUS10Q3MIT2 529 aaKnown RBP11.05□□□□□ -0.64
RTF1-202ENST00000462276 KCNT1Q5JUK3 1230 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 EP400NLQ6ZTU2 488 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 OTOP3Q7RTS5 596 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 ARID3BQ8IVW6 561 aaPredicted RBP11.05□□□□□ -0.64
RTF1-202ENST00000462276 NPAS3Q8IXF0 933 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 RASGEF1CQ8N431 466 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 CCDC185Q8N715 623 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 MNS1Q8NEH6 495 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 ITFG1Q8TB96 612 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 SUSD6Q92537 303 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 RAPGEF5Q92565 580 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 HSPH1Q92598 858 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 FGF13Q92913 245 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 SMARCD2Q92925 531 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 FAF2Q96CS3 445 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 ZFRQ96KR1 1074 aaKnown RBP11.05□□□□□ -0.64
RTF1-202ENST00000462276 FAM161BQ96MY7 647 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 PEBP4Q96S96 227 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 CYP2S1Q96SQ9 504 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 FRMD8P1Q9BZ68 369 aaPredicted RBP11.05□□□□□ -0.64
RTF1-202ENST00000462276 DHX35Q9H5Z1 703 aaKnown RBP11.05□□□□□ -0.64
RTF1-202ENST00000462276 PCDH18Q9HCL0 1135 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 MTMR10Q9NXD2 777 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 PPARGC1AQ9UBK2 798 aaKnown RBP11.05□□□□□ -0.64
RTF1-202ENST00000462276 PACSIN2Q9UNF0 486 aaPredicted RBP11.05□□□□□ -0.64
RTF1-202ENST00000462276 SH3BP1Q9Y3L3 701 aa11.05□□□□□ -0.64
RTF1-202ENST00000462276 COL4A4P53420 1690 aaPredicted RBP11.04□□□□□ -0.64
RTF1-202ENST00000462276 GBF1Q92538 1859 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 PGRMC1O00264 195 aaKnown RBP11.04□□□□□ -0.64
RTF1-202ENST00000462276 LEFTY2O00292 366 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 DLL1O00548 723 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms