RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 SPOPLQ6IQ16 392 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 SERPINA13PQ6UXR4 307 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 FAM124AQ86V42 546 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 CACUL1Q86Y37 369 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 SLC9A9Q8IVB4 645 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 ADAM32Q8TC27 787 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 SNX19Q92543 992 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 IGSF8Q969P0 613 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 CRELD1Q96HD1 420 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 TWNKQ96RR1 684 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 CIPCQ9C0C6 399 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 C6orf106Q9H6K1 298 aaPredicted RBP11.38□□□□□ -0.59
CBX3-205ENST00000462165 UPF2Q9HAU5 1272 aaKnown RBP11.38□□□□□ -0.59
CBX3-205ENST00000462165 TM9SF3Q9HD45 589 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 DMAC2Q9NW81 257 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 RASAL2Q9UJF2 1139 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 AGO1Q9UL18 857 aaKnown RBP11.38□□□□□ -0.59
CBX3-205ENST00000462165 CLEC4EQ9ULY5 219 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 MTMR6Q9Y217 621 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 ANKRD6Q9Y2G4 727 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.38□□□□□ -0.59
CBX3-205ENST00000462165 ATMQ13315 3056 aa11.37□□□□□ -0.59
CBX3-205ENST00000462165 FAM149AA5PLN7 773 aa11.37□□□□□ -0.59
CBX3-205ENST00000462165 TIMM44O43615 452 aa11.37□□□□□ -0.59
CBX3-205ENST00000462165 CASP1P29466 404 aa11.37□□□□□ -0.59
CBX3-205ENST00000462165 ABCG1P45844 678 aa11.37□□□□□ -0.59
CBX3-205ENST00000462165 CCT8P50990 548 aa11.37□□□□□ -0.59
CBX3-205ENST00000462165 PDE4CQ08493 712 aa11.37□□□□□ -0.59
CBX3-205ENST00000462165 EFEMP1Q12805 493 aa11.37□□□□□ -0.59
CBX3-205ENST00000462165 SV2AQ7L0J3 742 aa11.37□□□□□ -0.59
CBX3-205ENST00000462165 TMPRSS12Q86WS5 348 aa11.37□□□□□ -0.59
CBX3-205ENST00000462165 FAM217AQ8IXS0 508 aa11.37□□□□□ -0.59
CBX3-205ENST00000462165 ENGASEQ8NFI3 743 aa11.37□□□□□ -0.59
CBX3-205ENST00000462165 TMC2Q8TDI7 906 aa11.37□□□□□ -0.59
CBX3-205ENST00000462165 SORCS1Q8WY21 1168 aa11.37□□□□□ -0.59
CBX3-205ENST00000462165 UBL7Q96S82 380 aaPredicted RBP11.37□□□□□ -0.59
CBX3-205ENST00000462165 NT5C1AQ9BXI3 368 aa11.37□□□□□ -0.59
CBX3-205ENST00000462165 DUSP16Q9BY84 665 aa11.37□□□□□ -0.59
CBX3-205ENST00000462165 BACH2Q9BYV9 841 aa11.37□□□□□ -0.59
CBX3-205ENST00000462165 LHX5Q9H2C1 402 aa11.37□□□□□ -0.59
CBX3-205ENST00000462165 BLZF1Q9H2G9 400 aa11.37□□□□□ -0.59
CBX3-205ENST00000462165 TMEM245Q9H330 911 aa11.37□□□□□ -0.59
CBX3-205ENST00000462165 KNTC1P50748 2209 aa11.37□□□□□ -0.59
CBX3-205ENST00000462165 MYLKQ15746 1914 aa11.37□□□□□ -0.59
CBX3-205ENST00000462165 IKBKBO14920 756 aa11.36□□□□□ -0.59
CBX3-205ENST00000462165 TSPAN3O60637 253 aa11.36□□□□□ -0.59
CBX3-205ENST00000462165 CUTAO60888 179 aa11.36□□□□□ -0.59
CBX3-205ENST00000462165 HLA-DRAP01903 254 aa11.36□□□□□ -0.59
CBX3-205ENST00000462165 HMBSP08397 361 aa11.36□□□□□ -0.59
CBX3-205ENST00000462165 HLA-EP13747 358 aa11.36□□□□□ -0.59
CBX3-205ENST00000462165 CD27P26842 260 aa11.36□□□□□ -0.59
CBX3-205ENST00000462165 PIK3CAP42336 1068 aa11.36□□□□□ -0.59
CBX3-205ENST00000462165 CTSKP43235 329 aa11.36□□□□□ -0.59
CBX3-205ENST00000462165 ARID5AQ03989 594 aa11.36□□□□□ -0.59
CBX3-205ENST00000462165 PPP1R26Q5T8A7 1209 aaPredicted RBP11.36□□□□□ -0.59
CBX3-205ENST00000462165 SHC4Q6S5L8 630 aa11.36□□□□□ -0.59
CBX3-205ENST00000462165 DHRS13Q6UX07 377 aa11.36□□□□□ -0.59
CBX3-205ENST00000462165 DENND1CQ8IV53 801 aa11.36□□□□□ -0.59
CBX3-205ENST00000462165 DDI1Q8WTU0 396 aa11.36□□□□□ -0.59
CBX3-205ENST00000462165 BIRC7Q96CA5 298 aa11.36□□□□□ -0.59
CBX3-205ENST00000462165 BTBD1Q9H0C5 482 aa11.36□□□□□ -0.59
CBX3-205ENST00000462165 FBRSQ9HAH7 460 aa11.36□□□□□ -0.59
CBX3-205ENST00000462165 CYP3A43Q9HB55 503 aa11.36□□□□□ -0.59
CBX3-205ENST00000462165 MARCH2Q9P0N8 246 aa11.36□□□□□ -0.59
CBX3-205ENST00000462165 H0Y8X5 98 aa11.35□□□□□ -0.59
CBX3-205ENST00000462165 TK2O00142 265 aa11.35□□□□□ -0.59
CBX3-205ENST00000462165 KCNK3O14649 394 aa11.35□□□□□ -0.59
CBX3-205ENST00000462165 POLR2DO15514 142 aaKnown RBP11.35□□□□□ -0.59
CBX3-205ENST00000462165 DFNA5O60443 496 aa11.35□□□□□ -0.59
CBX3-205ENST00000462165 KIF20AO95235 890 aa11.35□□□□□ -0.59
CBX3-205ENST00000462165 ZIC2O95409 532 aaPredicted RBP11.35□□□□□ -0.59
CBX3-205ENST00000462165 YEATS4O95619 227 aa11.35□□□□□ -0.59
CBX3-205ENST00000462165 SEMA4FO95754 770 aa11.35□□□□□ -0.59
CBX3-205ENST00000462165 HOXD9P28356 352 aaPredicted RBP11.35□□□□□ -0.59
CBX3-205ENST00000462165 ZBTB16Q05516 673 aa11.35□□□□□ -0.59
CBX3-205ENST00000462165 C19orf57Q0VDD7 668 aa11.35□□□□□ -0.59
CBX3-205ENST00000462165 CUL4BQ13620 913 aa11.35□□□□□ -0.59
CBX3-205ENST00000462165 INAVAQ3KP66 663 aa11.35□□□□□ -0.59
CBX3-205ENST00000462165 MPPE1Q53F39 396 aa11.35□□□□□ -0.59
CBX3-205ENST00000462165 KCNT1Q5JUK3 1230 aa11.35□□□□□ -0.59
CBX3-205ENST00000462165 C1orf220Q5T0J3 134 aa11.35□□□□□ -0.59
CBX3-205ENST00000462165 LAYNQ6UX15 382 aa11.35□□□□□ -0.59
CBX3-205ENST00000462165 ARHGAP18Q8N392 663 aa11.35□□□□□ -0.59
CBX3-205ENST00000462165 KIAA0895Q8NCT3 520 aa11.35□□□□□ -0.59
CBX3-205ENST00000462165 WFIKKN2Q8TEU8 576 aa11.35□□□□□ -0.59
CBX3-205ENST00000462165 COL26A1Q96A83 441 aa11.35□□□□□ -0.59
CBX3-205ENST00000462165 PLD4Q96BZ4 506 aa11.35□□□□□ -0.59
CBX3-205ENST00000462165 UBXN6Q9BZV1 441 aa11.35□□□□□ -0.59
CBX3-205ENST00000462165 IMPG2Q9BZV3 1241 aa11.35□□□□□ -0.59
CBX3-205ENST00000462165 KCTD10Q9H3F6 313 aa11.35□□□□□ -0.59
CBX3-205ENST00000462165 SGK2Q9HBY8 427 aa11.35□□□□□ -0.59
CBX3-205ENST00000462165 APOBEC3GQ9HC16 384 aaKnown RBP11.35□□□□□ -0.59
CBX3-205ENST00000462165 FTSJ1Q9UET6 329 aa11.35□□□□□ -0.59
CBX3-205ENST00000462165 STRIP2Q9ULQ0 834 aa11.35□□□□□ -0.59
CBX3-205ENST00000462165 PLA2G4CQ9UP65 541 aa11.35□□□□□ -0.59
CBX3-205ENST00000462165 PCDHGA1Q9Y5H4 931 aa11.35□□□□□ -0.59
CBX3-205ENST00000462165 MGAQ8IWI9 3026 aa11.34□□□□□ -0.59
CBX3-205ENST00000462165 FLNBO75369 2602 aaKnown RBP11.34□□□□□ -0.59
CBX3-205ENST00000462165 A0A1B0GTQ1 180 aa11.34□□□□□ -0.59
CBX3-205ENST00000462165 SLC12A8A0AV02 714 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 341 ms