RNA–Protein interactions for RNA: ENST00000461071.1

SLC39A1-208, Transcript of solute carrier family 39 member 1, humanhuman

TSL 3

Gene SLC39A1, Length 529 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-208ENST00000461071 TRIM49P0CI25 452 aa18.18■□□□□ 0.5
SLC39A1-208ENST00000461071 TRIM49CP0CI26 452 aa18.18■□□□□ 0.5
SLC39A1-208ENST00000461071 CMA1P23946 247 aa18.18■□□□□ 0.5
SLC39A1-208ENST00000461071 PRKCHP24723 683 aa18.18■□□□□ 0.5
SLC39A1-208ENST00000461071 MATKP42679 507 aa18.18■□□□□ 0.5
SLC39A1-208ENST00000461071 TRIP4Q15650 581 aaPredicted RBP18.18■□□□□ 0.5
SLC39A1-208ENST00000461071 HLA-BQ31612 363 aa18.18■□□□□ 0.5
SLC39A1-208ENST00000461071 ARHGAP17Q68EM7 881 aa18.18■□□□□ 0.5
SLC39A1-208ENST00000461071 PM20D1Q6GTS8 502 aa18.18■□□□□ 0.5
SLC39A1-208ENST00000461071 DENND1CQ8IV53 801 aa18.18■□□□□ 0.5
SLC39A1-208ENST00000461071 PNPLA1Q8N8W4 532 aa18.18■□□□□ 0.5
SLC39A1-208ENST00000461071 CCDC150Q8NCX0 1101 aa18.18■□□□□ 0.5
SLC39A1-208ENST00000461071 PLD4Q96BZ4 506 aa18.18■□□□□ 0.5
SLC39A1-208ENST00000461071 GAREM1Q9H706 876 aa18.18■□□□□ 0.5
SLC39A1-208ENST00000461071 IL21RQ9HBE5 538 aa18.18■□□□□ 0.5
SLC39A1-208ENST00000461071 OSGEPQ9NPF4 335 aa18.18■□□□□ 0.5
SLC39A1-208ENST00000461071 TM7SF3Q9NS93 570 aa18.18■□□□□ 0.5
SLC39A1-208ENST00000461071 RASAL2Q9UJF2 1139 aa18.18■□□□□ 0.5
SLC39A1-208ENST00000461071 STRIP2Q9ULQ0 834 aa18.18■□□□□ 0.5
SLC39A1-208ENST00000461071 CLEC4EQ9ULY5 219 aa18.18■□□□□ 0.5
SLC39A1-208ENST00000461071 HPSEQ9Y251 543 aa18.18■□□□□ 0.5
SLC39A1-208ENST00000461071 FNDC3AQ9Y2H6 1198 aaKnown RBP18.18■□□□□ 0.5
SLC39A1-208ENST00000461071 GTF3C3Q9Y5Q9 886 aa18.18■□□□□ 0.5
SLC39A1-208ENST00000461071 RHOBTB3O94955 611 aa18.17■□□□□ 0.5
SLC39A1-208ENST00000461071 KRT13P13646 458 aa18.17■□□□□ 0.5
SLC39A1-208ENST00000461071 RPL13P26373 211 aaKnown RBP18.17■□□□□ 0.5
SLC39A1-208ENST00000461071 FOXD4L5Q5VV16 416 aaPredicted RBP18.17■□□□□ 0.5
SLC39A1-208ENST00000461071 ANKRD52Q8NB46 1076 aa18.17■□□□□ 0.5
SLC39A1-208ENST00000461071 SLC4A11Q8NBS3 891 aa18.17■□□□□ 0.5
SLC39A1-208ENST00000461071 OR2T3Q8NH03 318 aa18.17■□□□□ 0.5
SLC39A1-208ENST00000461071 FOXD4L4Q8WXT5 416 aaPredicted RBP18.17■□□□□ 0.5
SLC39A1-208ENST00000461071 HEXIM2Q96MH2 286 aaKnown RBP18.17■□□□□ 0.5
SLC39A1-208ENST00000461071 CDC6Q99741 560 aa18.17■□□□□ 0.5
SLC39A1-208ENST00000461071 MIR1-1HGQ9H1L0 117 aa18.17■□□□□ 0.5
SLC39A1-208ENST00000461071 TMEM245Q9H330 911 aa18.17■□□□□ 0.5
SLC39A1-208ENST00000461071 CCDC86Q9H6F5 360 aaKnown RBP18.17■□□□□ 0.5
SLC39A1-208ENST00000461071 EIF2B4Q9UI10 523 aaKnown RBP18.17■□□□□ 0.5
SLC39A1-208ENST00000461071 STOML2Q9UJZ1 356 aa18.17■□□□□ 0.5
SLC39A1-208ENST00000461071 PLXNA2O75051 1894 aa18.17■□□□□ 0.5
SLC39A1-208ENST00000461071 NYNRINQ9P2P1 1898 aaKnown RBP18.17■□□□□ 0.5
SLC39A1-208ENST00000461071 KALRNO60229 2985 aa18.17■□□□□ 0.5
SLC39A1-208ENST00000461071 SHROOM3Q8TF72 1996 aa18.17■□□□□ 0.5
SLC39A1-208ENST00000461071 SMG1Q96Q15 3661 aaKnown RBP18.17■□□□□ 0.5
SLC39A1-208ENST00000461071 COL5A1P20908 1838 aaPredicted RBP18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 FLRT2O43155 660 aa18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 ZBED1O96006 694 aa18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 EPHX1P07099 455 aa18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 HMBSP08397 361 aa18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 ACADMP11310 421 aa18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 PFKFB1P16118 471 aa18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 HOXD9P28356 352 aaPredicted RBP18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 PSMC2P35998 433 aaKnown RBP18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 AFF3P51826 1226 aaKnown RBP18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 RAD23BP54727 409 aa18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 ZNF445P59923 1031 aa18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 YWHAGP61981 247 aaKnown RBP eCLIP18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 FOXD4L6Q3SYB3 417 aaPredicted RBP18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 KRT39Q6A163 491 aa18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 SERPINA13PQ6UXR4 307 aa18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 FOXD4L3Q6VB84 417 aaPredicted RBP18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 RSRC2Q7L4I2 434 aaKnown RBP18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 TMPRSS7Q7RTY8 843 aa18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 KIAA0907Q7Z7F0 614 aaPredicted RBP18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 PIGZQ86VD9 579 aa18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 FAM186BQ8IYM0 893 aa18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 GUF1Q8N442 669 aaKnown RBP18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 SETD7Q8WTS6 366 aaKnown RBP18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 DDI1Q8WTU0 396 aa18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 SORCS1Q8WY21 1168 aa18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 TMEM176AQ96HP8 235 aa18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 CIPCQ9C0C6 399 aa18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 FBRSQ9HAH7 460 aa18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 CISHQ9NSE2 258 aa18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 OLA1Q9NTK5 396 aaKnown RBP18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 TOR4AQ9NXH8 423 aa18.16■□□□□ 0.5
SLC39A1-208ENST00000461071 MYLKQ15746 1914 aa18.15■□□□□ 0.5
SLC39A1-208ENST00000461071 SETXQ7Z333 2677 aaKnown RBP18.15■□□□□ 0.5
SLC39A1-208ENST00000461071 SLC12A8A0AV02 714 aa18.15■□□□□ 0.5
SLC39A1-208ENST00000461071 DNM1Q05193 864 aaKnown RBP18.15■□□□□ 0.5
SLC39A1-208ENST00000461071 ZBTB16Q05516 673 aa18.15■□□□□ 0.5
SLC39A1-208ENST00000461071 ZCWPW2Q504Y3 356 aa18.15■□□□□ 0.5
SLC39A1-208ENST00000461071 MPPE1Q53F39 396 aa18.15■□□□□ 0.5
SLC39A1-208ENST00000461071 BHLHA9Q7RTU4 235 aa18.15■□□□□ 0.5
SLC39A1-208ENST00000461071 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.15■□□□□ 0.5
SLC39A1-208ENST00000461071 WFIKKN2Q8TEU8 576 aa18.15■□□□□ 0.5
SLC39A1-208ENST00000461071 SEMA4DQ92854 862 aa18.15■□□□□ 0.5
SLC39A1-208ENST00000461071 IRX2Q9BZI1 471 aaPredicted RBP18.15■□□□□ 0.5
SLC39A1-208ENST00000461071 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.15■□□□□ 0.5
SLC39A1-208ENST00000461071 HBS1LQ9Y450 684 aaKnown RBP18.15■□□□□ 0.5
SLC39A1-208ENST00000461071 FAM237AA0A1B0GTK4 181 aa18.14■□□□□ 0.49
SLC39A1-208ENST00000461071 A0A1B0GVL5 298 aa18.14■□□□□ 0.49
SLC39A1-208ENST00000461071 LATS1O95835 1130 aa18.14■□□□□ 0.49
SLC39A1-208ENST00000461071 HLA-FP30511 346 aa18.14■□□□□ 0.49
SLC39A1-208ENST00000461071 CSNK1EP49674 416 aaKnown RBP18.14■□□□□ 0.49
SLC39A1-208ENST00000461071 TKTL1P51854 596 aa18.14■□□□□ 0.49
SLC39A1-208ENST00000461071 SLC8A3P57103 927 aa18.14■□□□□ 0.49
SLC39A1-208ENST00000461071 ZNF394Q53GI3 561 aa18.14■□□□□ 0.49
SLC39A1-208ENST00000461071 FBXL13Q8NEE6 735 aa18.14■□□□□ 0.49
SLC39A1-208ENST00000461071 SCUBE2Q9NQ36 999 aa18.14■□□□□ 0.49
SLC39A1-208ENST00000461071 A0A1B0GVT2 93 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms