RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 RASGRP2Q7LDG7 609 aa6.16□□□□□ -1.42
CCDC50-203ENST00000460064 FSIP1Q8NA03 581 aa6.16□□□□□ -1.42
CCDC50-203ENST00000460064 OR52L2PQ8NGH6 319 aa6.16□□□□□ -1.42
CCDC50-203ENST00000460064 GLMPQ8WWB7 406 aa6.16□□□□□ -1.42
CCDC50-203ENST00000460064 HVCN1Q96D96 273 aa6.16□□□□□ -1.42
CCDC50-203ENST00000460064 TWNKQ96RR1 684 aa6.16□□□□□ -1.42
CCDC50-203ENST00000460064 RMI1Q9H9A7 625 aa6.16□□□□□ -1.42
CCDC50-203ENST00000460064 PLEKHA2Q9HB19 425 aa6.16□□□□□ -1.42
CCDC50-203ENST00000460064 DNAJC16Q9Y2G8 782 aa6.16□□□□□ -1.42
CCDC50-203ENST00000460064 J3KRW8 73 aa6.15□□□□□ -1.42
CCDC50-203ENST00000460064 EXOC3O60645 756 aa6.15□□□□□ -1.42
CCDC50-203ENST00000460064 PRAMEF2O60811 474 aa6.15□□□□□ -1.42
CCDC50-203ENST00000460064 ADRB1P08588 477 aa6.15□□□□□ -1.42
CCDC50-203ENST00000460064 CPA1P15085 419 aa6.15□□□□□ -1.42
CCDC50-203ENST00000460064 MATN1P21941 496 aa6.15□□□□□ -1.42
CCDC50-203ENST00000460064 MCM7P33993 719 aa6.15□□□□□ -1.42
CCDC50-203ENST00000460064 DDIT3P35638 169 aa6.15□□□□□ -1.42
CCDC50-203ENST00000460064 PLA2G5P39877 138 aa6.15□□□□□ -1.42
CCDC50-203ENST00000460064 PCP4P48539 62 aa6.15□□□□□ -1.42
CCDC50-203ENST00000460064 TUBP50607 506 aa6.15□□□□□ -1.42
CCDC50-203ENST00000460064 JAK3P52333 1124 aa6.15□□□□□ -1.42
CCDC50-203ENST00000460064 MAPK7Q13164 816 aa6.15□□□□□ -1.42
CCDC50-203ENST00000460064 DCTN1Q14203 1278 aa6.15□□□□□ -1.42
CCDC50-203ENST00000460064 ZNF169Q14929 603 aaPredicted RBP6.15□□□□□ -1.42
CCDC50-203ENST00000460064 RNASE12Q5GAN4 147 aaKnown RBP6.15□□□□□ -1.42
CCDC50-203ENST00000460064 AARS2Q5JTZ9 985 aaKnown RBP6.15□□□□□ -1.42
CCDC50-203ENST00000460064 LAIR1Q6GTX8 287 aa6.15□□□□□ -1.42
CCDC50-203ENST00000460064 RETSATQ6NUM9 610 aa6.15□□□□□ -1.42
CCDC50-203ENST00000460064 WDR93Q6P2C0 686 aa6.15□□□□□ -1.42
CCDC50-203ENST00000460064 NAPRTQ6XQN6 538 aa6.15□□□□□ -1.42
CCDC50-203ENST00000460064 BEND2Q8NDZ0 799 aa6.15□□□□□ -1.42
CCDC50-203ENST00000460064 SLC9A6Q92581 669 aa6.15□□□□□ -1.42
CCDC50-203ENST00000460064 EDC3Q96F86 508 aaKnown RBP6.15□□□□□ -1.42
CCDC50-203ENST00000460064 PDLIM2Q96JY6 352 aa6.15□□□□□ -1.42
CCDC50-203ENST00000460064 SNX18Q96RF0 628 aa6.15□□□□□ -1.42
CCDC50-203ENST00000460064 PIGSQ96S52 555 aa6.15□□□□□ -1.42
CCDC50-203ENST00000460064 THAP7Q9BT49 309 aaPredicted RBP6.15□□□□□ -1.42
CCDC50-203ENST00000460064 ELOVL1Q9BW60 279 aa6.15□□□□□ -1.42
CCDC50-203ENST00000460064 SLC26A6Q9BXS9 759 aa6.15□□□□□ -1.42
CCDC50-203ENST00000460064 CDCP1Q9H5V8 836 aa6.15□□□□□ -1.42
CCDC50-203ENST00000460064 RASSF1Q9NS23 344 aa6.15□□□□□ -1.42
CCDC50-203ENST00000460064 FOXJ2Q9P0K8 574 aa6.15□□□□□ -1.42
CCDC50-203ENST00000460064 MBD3L5A6NJ08 208 aaPredicted RBP6.14□□□□□ -1.43
CCDC50-203ENST00000460064 HEXIM1O94992 359 aaKnown RBP6.14□□□□□ -1.43
CCDC50-203ENST00000460064 CYP3A4P08684 503 aa6.14□□□□□ -1.43
CCDC50-203ENST00000460064 CNPP09543 421 aaKnown RBP6.14□□□□□ -1.43
CCDC50-203ENST00000460064 TNFAIP3P21580 790 aa6.14□□□□□ -1.43
CCDC50-203ENST00000460064 DUSP1P28562 367 aa6.14□□□□□ -1.43
CCDC50-203ENST00000460064 CCR5P51681 352 aa6.14□□□□□ -1.43
CCDC50-203ENST00000460064 RCAN1P53805 252 aa6.14□□□□□ -1.43
CCDC50-203ENST00000460064 RAE1P78406 368 aaKnown RBP6.14□□□□□ -1.43
CCDC50-203ENST00000460064 CFHR3Q02985 330 aa6.14□□□□□ -1.43
CCDC50-203ENST00000460064 ZNF484Q5JVG2 852 aa6.14□□□□□ -1.43
CCDC50-203ENST00000460064 MAP3K21Q5TCX8 1036 aa6.14□□□□□ -1.43
CCDC50-203ENST00000460064 HEATR4Q86WZ0 1026 aa6.14□□□□□ -1.43
CCDC50-203ENST00000460064 RASAL3Q86YV0 1011 aa6.14□□□□□ -1.43
CCDC50-203ENST00000460064 ULK2Q8IYT8 1036 aa6.14□□□□□ -1.43
CCDC50-203ENST00000460064 TERB1Q8NA31 727 aa6.14□□□□□ -1.43
CCDC50-203ENST00000460064 LARP4BQ92615 738 aaKnown RBP6.14□□□□□ -1.43
CCDC50-203ENST00000460064 HTRA1Q92743 480 aa6.14□□□□□ -1.43
CCDC50-203ENST00000460064 KTI12Q96EK9 354 aaPredicted RBP6.14□□□□□ -1.43
CCDC50-203ENST00000460064 TRMT61AQ96FX7 289 aaKnown RBP6.14□□□□□ -1.43
CCDC50-203ENST00000460064 RBM17Q96I25 401 aaKnown RBP6.14□□□□□ -1.43
CCDC50-203ENST00000460064 HS6ST2Q96MM7 605 aa6.14□□□□□ -1.43
CCDC50-203ENST00000460064 REEP2Q9BRK0 252 aa6.14□□□□□ -1.43
CCDC50-203ENST00000460064 CIPCQ9C0C6 399 aa6.14□□□□□ -1.43
CCDC50-203ENST00000460064 ABHD10Q9NUJ1 306 aa6.14□□□□□ -1.43
CCDC50-203ENST00000460064 TMEM160Q9NX00 188 aa6.14□□□□□ -1.43
CCDC50-203ENST00000460064 PI4KBQ9UBF8 816 aa6.14□□□□□ -1.43
CCDC50-203ENST00000460064 FZD4Q9ULV1 537 aa6.14□□□□□ -1.43
CCDC50-203ENST00000460064 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.13□□□□□ -1.43
CCDC50-203ENST00000460064 A6NLC8 198 aa6.13□□□□□ -1.43
CCDC50-203ENST00000460064 GCOM1H8Y6P7 765 aaPredicted RBP6.13□□□□□ -1.43
CCDC50-203ENST00000460064 ZNF213O14771 459 aa6.13□□□□□ -1.43
CCDC50-203ENST00000460064 FYB1O15117 783 aa6.13□□□□□ -1.43
CCDC50-203ENST00000460064 HNRNPRO43390 633 aaKnown RBP6.13□□□□□ -1.43
CCDC50-203ENST00000460064 MBPP02686 304 aaPredicted RBP6.13□□□□□ -1.43
CCDC50-203ENST00000460064 FOXL2P58012 376 aa6.13□□□□□ -1.43
CCDC50-203ENST00000460064 TLE3Q04726 772 aa6.13□□□□□ -1.43
CCDC50-203ENST00000460064 HECTD2Q5U5R9 776 aa6.13□□□□□ -1.43
CCDC50-203ENST00000460064 BBS12Q6ZW61 710 aa6.13□□□□□ -1.43
CCDC50-203ENST00000460064 SLC29A4Q7RTT9 530 aa6.13□□□□□ -1.43
CCDC50-203ENST00000460064 MAATS1Q7Z4T9 603 aa6.13□□□□□ -1.43
CCDC50-203ENST00000460064 ZNF804AQ7Z570 1209 aa6.13□□□□□ -1.43
CCDC50-203ENST00000460064 ANKRD44Q8N8A2 993 aa6.13□□□□□ -1.43
CCDC50-203ENST00000460064 PTGR2Q8N8N7 351 aaPredicted RBP6.13□□□□□ -1.43
CCDC50-203ENST00000460064 USP38Q8NB14 1042 aa6.13□□□□□ -1.43
CCDC50-203ENST00000460064 LINS1Q8NG48 757 aa6.13□□□□□ -1.43
CCDC50-203ENST00000460064 CLEC4CQ8WTT0 213 aa6.13□□□□□ -1.43
CCDC50-203ENST00000460064 STAMQ92783 540 aa6.13□□□□□ -1.43
CCDC50-203ENST00000460064 ARRDC3Q96B67 414 aa6.13□□□□□ -1.43
CCDC50-203ENST00000460064 MMS19Q96T76 1030 aa6.13□□□□□ -1.43
CCDC50-203ENST00000460064 ADGRE3Q9BY15 652 aa6.13□□□□□ -1.43
CCDC50-203ENST00000460064 ZHX3Q9H4I2 956 aa6.13□□□□□ -1.43
CCDC50-203ENST00000460064 PDE11AQ9HCR9 933 aa6.13□□□□□ -1.43
CCDC50-203ENST00000460064 UBN1Q9NPG3 1134 aa6.13□□□□□ -1.43
CCDC50-203ENST00000460064 RCE1Q9Y256 329 aa6.13□□□□□ -1.43
CCDC50-203ENST00000460064 GRID2IPA4D2P6 1211 aa6.12□□□□□ -1.43
CCDC50-203ENST00000460064 VWA3AA6NCI4 1184 aa6.12□□□□□ -1.43
CCDC50-203ENST00000460064 TMEM191CA6NGB0 347 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms