RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 CEP250Q9BV73 2442 aa16.77■□□□□ 0.28
COL7A1-203ENST00000459756 DCLK1O15075 740 aa16.77■□□□□ 0.28
COL7A1-203ENST00000459756 NPC1O15118 1278 aa16.77■□□□□ 0.28
COL7A1-203ENST00000459756 ZBTB24O43167 697 aaPredicted RBP16.77■□□□□ 0.28
COL7A1-203ENST00000459756 IRAK2O43187 625 aa16.77■□□□□ 0.28
COL7A1-203ENST00000459756 TSPAN3O60637 253 aa16.77■□□□□ 0.28
COL7A1-203ENST00000459756 UCHL3P15374 230 aa16.77■□□□□ 0.28
COL7A1-203ENST00000459756 SDHBP21912 280 aa16.77■□□□□ 0.28
COL7A1-203ENST00000459756 HOXD9P28356 352 aaPredicted RBP16.77■□□□□ 0.28
COL7A1-203ENST00000459756 GBP1P32455 592 aa16.77■□□□□ 0.28
COL7A1-203ENST00000459756 BYSLQ13895 437 aaKnown RBP16.77■□□□□ 0.28
COL7A1-203ENST00000459756 DRAP1Q14919 205 aaPredicted RBP16.77■□□□□ 0.28
COL7A1-203ENST00000459756 EIF4HQ15056 248 aaKnown RBP16.77■□□□□ 0.28
COL7A1-203ENST00000459756 KRT31Q15323 416 aa16.77■□□□□ 0.28
COL7A1-203ENST00000459756 GEN1Q17RS7 908 aa16.77■□□□□ 0.28
COL7A1-203ENST00000459756 PASD1Q8IV76 773 aa16.77■□□□□ 0.28
COL7A1-203ENST00000459756 UCMAQ8WVF2 138 aa16.77■□□□□ 0.28
COL7A1-203ENST00000459756 SPACA7Q96KW9 195 aa16.77■□□□□ 0.28
COL7A1-203ENST00000459756 CPXM1Q96SM3 734 aa16.77■□□□□ 0.28
COL7A1-203ENST00000459756 ACOX2Q99424 681 aa16.77■□□□□ 0.28
COL7A1-203ENST00000459756 DDX50Q9BQ39 737 aaKnown RBP16.77■□□□□ 0.28
COL7A1-203ENST00000459756 LSM14BQ9BX40 385 aaKnown RBP16.77■□□□□ 0.28
COL7A1-203ENST00000459756 NAA15Q9BXJ9 866 aaKnown RBP16.77■□□□□ 0.28
COL7A1-203ENST00000459756 PLCB1Q9NQ66 1216 aa16.77■□□□□ 0.28
COL7A1-203ENST00000459756 FANCLQ9NW38 375 aa16.77■□□□□ 0.28
COL7A1-203ENST00000459756 INVSQ9Y283 1065 aa16.77■□□□□ 0.28
COL7A1-203ENST00000459756 CEP83Q9Y592 693 aa16.77■□□□□ 0.28
COL7A1-203ENST00000459756 FHOD1Q9Y613 1164 aa16.77■□□□□ 0.28
COL7A1-203ENST00000459756 A0A1W2PQF6 199 aa16.76■□□□□ 0.27
COL7A1-203ENST00000459756 TIMM44O43615 452 aa16.76■□□□□ 0.27
COL7A1-203ENST00000459756 ACSL4O60488 711 aa16.76■□□□□ 0.27
COL7A1-203ENST00000459756 GLI1P08151 1106 aa16.76■□□□□ 0.27
COL7A1-203ENST00000459756 PNMA6AP0CW24 399 aaPredicted RBP16.76■□□□□ 0.27
COL7A1-203ENST00000459756 WASP42768 502 aa16.76■□□□□ 0.27
COL7A1-203ENST00000459756 MYL5Q02045 173 aa16.76■□□□□ 0.27
COL7A1-203ENST00000459756 EFHC1Q5JVL4 640 aa16.76■□□□□ 0.27
COL7A1-203ENST00000459756 MPP7Q5T2T1 576 aa16.76■□□□□ 0.27
COL7A1-203ENST00000459756 SYPL2Q5VXT5 272 aa16.76■□□□□ 0.27
COL7A1-203ENST00000459756 C11orf57Q6ZUT1 292 aaPredicted RBP16.76■□□□□ 0.27
COL7A1-203ENST00000459756 TAC4Q86UU9 113 aa16.76■□□□□ 0.27
COL7A1-203ENST00000459756 PGBD3Q8N328 593 aa16.76■□□□□ 0.27
COL7A1-203ENST00000459756 RMDN1Q96DB5 314 aa16.76■□□□□ 0.27
COL7A1-203ENST00000459756 SLC39A13Q96H72 371 aa16.76■□□□□ 0.27
COL7A1-203ENST00000459756 FCRL2Q96LA5 508 aaPredicted RBP16.76■□□□□ 0.27
COL7A1-203ENST00000459756 VPS16Q9H269 839 aa16.76■□□□□ 0.27
COL7A1-203ENST00000459756 ARRDC1-AS1Q9H2J1 176 aa16.76■□□□□ 0.27
COL7A1-203ENST00000459756 ASNSD1Q9NWL6 643 aa16.76■□□□□ 0.27
COL7A1-203ENST00000459756 CLEC4EQ9ULY5 219 aa16.76■□□□□ 0.27
COL7A1-203ENST00000459756 SDK1Q7Z5N4 2213 aa16.76■□□□□ 0.27
COL7A1-203ENST00000459756 HSF2BPO75031 334 aa16.75■□□□□ 0.27
COL7A1-203ENST00000459756 CYP11B1P15538 503 aa16.75■□□□□ 0.27
COL7A1-203ENST00000459756 GABRG2P18507 467 aa16.75■□□□□ 0.27
COL7A1-203ENST00000459756 P2RY2P41231 377 aa16.75■□□□□ 0.27
COL7A1-203ENST00000459756 PUM1Q14671 1186 aaKnown RBP eCLIP16.75■□□□□ 0.27
COL7A1-203ENST00000459756 RSPO4Q2I0M5 234 aaPredicted RBP16.75■□□□□ 0.27
COL7A1-203ENST00000459756 FAM133BQ5BKY9 247 aaKnown RBP16.75■□□□□ 0.27
COL7A1-203ENST00000459756 FKBP15Q5T1M5 1219 aa16.75■□□□□ 0.27
COL7A1-203ENST00000459756 PIK3R6Q5UE93 754 aa16.75■□□□□ 0.27
COL7A1-203ENST00000459756 PMS2CLQ68D20 193 aa16.75■□□□□ 0.27
COL7A1-203ENST00000459756 PRR23CQ6ZRP0 262 aa16.75■□□□□ 0.27
COL7A1-203ENST00000459756 ZNF557Q8N988 423 aaPredicted RBP16.75■□□□□ 0.27
COL7A1-203ENST00000459756 C1orf131Q8NDD1 294 aaKnown RBP16.75■□□□□ 0.27
COL7A1-203ENST00000459756 ANKRD20A12PQ8NF67 263 aa16.75■□□□□ 0.27
COL7A1-203ENST00000459756 ADAM32Q8TC27 787 aa16.75■□□□□ 0.27
COL7A1-203ENST00000459756 IPO4Q8TEX9 1081 aaKnown RBP16.75■□□□□ 0.27
COL7A1-203ENST00000459756 STK33Q9BYT3 514 aa16.75■□□□□ 0.27
COL7A1-203ENST00000459756 SYNCQ9H7C4 482 aa16.75■□□□□ 0.27
COL7A1-203ENST00000459756 CD248Q9HCU0 757 aa16.75■□□□□ 0.27
COL7A1-203ENST00000459756 ELOVL2Q9NXB9 296 aa16.75■□□□□ 0.27
COL7A1-203ENST00000459756 CACNA2D2Q9NY47 1150 aa16.75■□□□□ 0.27
COL7A1-203ENST00000459756 DLL3Q9NYJ7 618 aa16.75■□□□□ 0.27
COL7A1-203ENST00000459756 THAP10Q9P2Z0 257 aaPredicted RBP16.75■□□□□ 0.27
COL7A1-203ENST00000459756 TJP2Q9UDY2 1190 aa16.75■□□□□ 0.27
COL7A1-203ENST00000459756 STON1Q9Y6Q2 735 aa16.75■□□□□ 0.27
COL7A1-203ENST00000459756 PLXND1Q9Y4D7 1925 aa16.74■□□□□ 0.27
COL7A1-203ENST00000459756 F8VZ95 297 aa16.74■□□□□ 0.27
COL7A1-203ENST00000459756 TRUB2O95900 331 aaKnown RBP16.74■□□□□ 0.27
COL7A1-203ENST00000459756 IGLV3-25P01717 112 aa16.74■□□□□ 0.27
COL7A1-203ENST00000459756 APOEP02649 317 aa16.74■□□□□ 0.27
COL7A1-203ENST00000459756 ZNF806P0C7X5 589 aa16.74■□□□□ 0.27
COL7A1-203ENST00000459756 BCKDHBP21953 392 aa16.74■□□□□ 0.27
COL7A1-203ENST00000459756 SLC6A4P31645 630 aa16.74■□□□□ 0.27
COL7A1-203ENST00000459756 MPLP40238 635 aa16.74■□□□□ 0.27
COL7A1-203ENST00000459756 ENPP2Q13822 863 aa16.74■□□□□ 0.27
COL7A1-203ENST00000459756 STARD3Q14849 445 aa16.74■□□□□ 0.27
COL7A1-203ENST00000459756 TAF5Q15542 800 aa16.74■□□□□ 0.27
COL7A1-203ENST00000459756 MAP7D1Q3KQU3 841 aa16.74■□□□□ 0.27
COL7A1-203ENST00000459756 DCAF6Q58WW2 860 aa16.74■□□□□ 0.27
COL7A1-203ENST00000459756 RNF43Q68DV7 783 aa16.74■□□□□ 0.27
COL7A1-203ENST00000459756 NADSYN1Q6IA69 706 aa16.74■□□□□ 0.27
COL7A1-203ENST00000459756 KIAA1211LQ6NV74 962 aa16.74■□□□□ 0.27
COL7A1-203ENST00000459756 RFWD3Q6PCD5 774 aa16.74■□□□□ 0.27
COL7A1-203ENST00000459756 HJURPQ8NCD3 748 aaPredicted RBP16.74■□□□□ 0.27
COL7A1-203ENST00000459756 TMEM35BQ8NCS4 154 aa16.74■□□□□ 0.27
COL7A1-203ENST00000459756 WFIKKN2Q8TEU8 576 aa16.74■□□□□ 0.27
COL7A1-203ENST00000459756 SLC2A13Q96QE2 648 aa16.74■□□□□ 0.27
COL7A1-203ENST00000459756 CIPCQ9C0C6 399 aa16.74■□□□□ 0.27
COL7A1-203ENST00000459756 PDCL3Q9H2J4 239 aa16.74■□□□□ 0.27
COL7A1-203ENST00000459756 DAAM1Q9Y4D1 1078 aa16.74■□□□□ 0.27
COL7A1-203ENST00000459756 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms