RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 HAPLN3Q96S86 360 aa25.29■■□□□ 1.64
U2AF1-204ENST00000459639 CDK5RAP1Q96SZ6 601 aaKnown RBP25.29■■□□□ 1.64
U2AF1-204ENST00000459639 OSBPL2Q9H1P3 480 aa25.29■■□□□ 1.64
U2AF1-204ENST00000459639 GRHL1Q9NZI5 618 aa25.29■■□□□ 1.64
U2AF1-204ENST00000459639 NUDT5Q9UKK9 219 aa25.29■■□□□ 1.64
U2AF1-204ENST00000459639 GBF1Q92538 1859 aa25.29■■□□□ 1.64
U2AF1-204ENST00000459639 CNPP09543 421 aaKnown RBP25.28■■□□□ 1.64
U2AF1-204ENST00000459639 RBP3P10745 1247 aa25.28■■□□□ 1.64
U2AF1-204ENST00000459639 AMPD1P23109 780 aa25.28■■□□□ 1.64
U2AF1-204ENST00000459639 KLRC2P26717 231 aa25.28■■□□□ 1.64
U2AF1-204ENST00000459639 DPYSQ14117 519 aa25.28■■□□□ 1.64
U2AF1-204ENST00000459639 NCBP2-AS2Q69YL0 99 aa25.28■■□□□ 1.64
U2AF1-204ENST00000459639 HDXQ7Z353 690 aa25.28■■□□□ 1.64
U2AF1-204ENST00000459639 ZNF276Q8N554 614 aa25.28■■□□□ 1.64
U2AF1-204ENST00000459639 TRMT2BQ96GJ1 504 aaKnown RBP25.28■■□□□ 1.64
U2AF1-204ENST00000459639 EPAS1Q99814 870 aa25.28■■□□□ 1.64
U2AF1-204ENST00000459639 TMEM121Q9BTD3 319 aa25.28■■□□□ 1.64
U2AF1-204ENST00000459639 FUT8Q9BYC5 575 aa25.28■■□□□ 1.64
U2AF1-204ENST00000459639 NEUROG2Q9H2A3 272 aa25.28■■□□□ 1.64
U2AF1-204ENST00000459639 WHRNQ9P202 907 aa25.28■■□□□ 1.64
U2AF1-204ENST00000459639 INSL5Q9Y5Q6 135 aa25.28■■□□□ 1.64
U2AF1-204ENST00000459639 LINC01553A4QN01 128 aa25.27■■□□□ 1.64
U2AF1-204ENST00000459639 SLC2A3P11169 496 aa25.27■■□□□ 1.64
U2AF1-204ENST00000459639 HMGA1P17096 107 aaKnown RBP25.27■■□□□ 1.64
U2AF1-204ENST00000459639 TNNT3P45378 269 aaPredicted RBP25.27■■□□□ 1.64
U2AF1-204ENST00000459639 TPI1P60174 286 aa25.27■■□□□ 1.64
U2AF1-204ENST00000459639 SNX30Q5VWJ9 437 aa25.27■■□□□ 1.64
U2AF1-204ENST00000459639 TMC7Q7Z402 723 aa25.27■■□□□ 1.64
U2AF1-204ENST00000459639 SNF8Q96H20 258 aa25.27■■□□□ 1.64
U2AF1-204ENST00000459639 SLC39A13Q96H72 371 aa25.27■■□□□ 1.64
U2AF1-204ENST00000459639 PCDH9Q9HC56 1237 aa25.27■■□□□ 1.64
U2AF1-204ENST00000459639 ZDHHC18Q9NUE0 388 aa25.27■■□□□ 1.64
U2AF1-204ENST00000459639 HEY1Q9Y5J3 304 aa25.27■■□□□ 1.64
U2AF1-204ENST00000459639 IRAK3Q9Y616 596 aa25.27■■□□□ 1.64
U2AF1-204ENST00000459639 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.26■■□□□ 1.63
U2AF1-204ENST00000459639 FAM72CH0Y354 149 aa25.26■■□□□ 1.63
U2AF1-204ENST00000459639 SGK1O00141 431 aa25.26■■□□□ 1.63
U2AF1-204ENST00000459639 CXCL14O95715 111 aa25.26■■□□□ 1.63
U2AF1-204ENST00000459639 CA8P35219 290 aa25.26■■□□□ 1.63
U2AF1-204ENST00000459639 FAM72AQ5TYM5 149 aa25.26■■□□□ 1.63
U2AF1-204ENST00000459639 FAM72DQ6L9T8 149 aa25.26■■□□□ 1.63
U2AF1-204ENST00000459639 FAM72BQ86X60 149 aa25.26■■□□□ 1.63
U2AF1-204ENST00000459639 OR12D3Q9UGF7 316 aa25.26■■□□□ 1.63
U2AF1-204ENST00000459639 KCNU1A8MYU2 1149 aa25.26■■□□□ 1.63
U2AF1-204ENST00000459639 ADH1AP07327 375 aa25.26■■□□□ 1.63
U2AF1-204ENST00000459639 FAM153BP0C7A2 387 aa25.26■■□□□ 1.63
U2AF1-204ENST00000459639 IVDP26440 423 aa25.26■■□□□ 1.63
U2AF1-204ENST00000459639 HTR7P34969 479 aa25.26■■□□□ 1.63
U2AF1-204ENST00000459639 TBX4P57082 545 aa25.26■■□□□ 1.63
U2AF1-204ENST00000459639 UBE3AQ05086 875 aa25.26■■□□□ 1.63
U2AF1-204ENST00000459639 TWF1Q12792 350 aa25.26■■□□□ 1.63
U2AF1-204ENST00000459639 EFEMP1Q12805 493 aa25.26■■□□□ 1.63
U2AF1-204ENST00000459639 CALCOCO2Q13137 446 aa25.26■■□□□ 1.63
U2AF1-204ENST00000459639 PLD1Q13393 1074 aa25.26■■□□□ 1.63
U2AF1-204ENST00000459639 XRCC4Q13426 336 aa25.26■■□□□ 1.63
U2AF1-204ENST00000459639 TRIP13Q15645 432 aaPredicted RBP25.26■■□□□ 1.63
U2AF1-204ENST00000459639 TRIP4Q15650 581 aaPredicted RBP25.26■■□□□ 1.63
U2AF1-204ENST00000459639 FAM153CQ494X1 144 aa25.26■■□□□ 1.63
U2AF1-204ENST00000459639 C10orf120Q5SQS8 335 aa25.26■■□□□ 1.63
U2AF1-204ENST00000459639 ZDHHC24Q6UX98 284 aa25.26■■□□□ 1.63
U2AF1-204ENST00000459639 TADA2BQ86TJ2 420 aa25.26■■□□□ 1.63
U2AF1-204ENST00000459639 BBOF1Q8ND07 529 aa25.26■■□□□ 1.63
U2AF1-204ENST00000459639 RSAD2Q8WXG1 361 aa25.26■■□□□ 1.63
U2AF1-204ENST00000459639 FAM153AQ9UHL3 310 aa25.26■■□□□ 1.63
U2AF1-204ENST00000459639 CFAP69A5D8W1 941 aa25.25■■□□□ 1.63
U2AF1-204ENST00000459639 C5orf67F2Z3F1 127 aa25.25■■□□□ 1.63
U2AF1-204ENST00000459639 DCLK1O15075 740 aa25.25■■□□□ 1.63
U2AF1-204ENST00000459639 ITIH2P19823 946 aa25.25■■□□□ 1.63
U2AF1-204ENST00000459639 EPHB3P54753 998 aa25.25■■□□□ 1.63
U2AF1-204ENST00000459639 GBE1Q04446 702 aa25.25■■□□□ 1.63
U2AF1-204ENST00000459639 CASP8Q14790 479 aa25.25■■□□□ 1.63
U2AF1-204ENST00000459639 PAFAH1B3Q15102 231 aaKnown RBP25.25■■□□□ 1.63
U2AF1-204ENST00000459639 DARS2Q6PI48 645 aaKnown RBP25.25■■□□□ 1.63
U2AF1-204ENST00000459639 BZW1Q7L1Q6 419 aaKnown RBP25.25■■□□□ 1.63
U2AF1-204ENST00000459639 ZC3H18Q86VM9 953 aaKnown RBP25.25■■□□□ 1.63
U2AF1-204ENST00000459639 ART4Q93070 314 aa25.25■■□□□ 1.63
U2AF1-204ENST00000459639 FCRL2Q96LA5 508 aaPredicted RBP25.25■■□□□ 1.63
U2AF1-204ENST00000459639 ZNF512Q96ME7 567 aaPredicted RBP25.25■■□□□ 1.63
U2AF1-204ENST00000459639 FMO2Q99518 471 aa25.25■■□□□ 1.63
U2AF1-204ENST00000459639 TCF25Q9BQ70 676 aa25.25■■□□□ 1.63
U2AF1-204ENST00000459639 EMILIN2Q9BXX0 1053 aa25.25■■□□□ 1.63
U2AF1-204ENST00000459639 ETNK2Q9NVF9 386 aa25.25■■□□□ 1.63
U2AF1-204ENST00000459639 MARCH2Q9P0N8 246 aa25.25■■□□□ 1.63
U2AF1-204ENST00000459639 H7C0C1 242 aa25.24■■□□□ 1.63
U2AF1-204ENST00000459639 MAP2K7O14733 419 aa25.24■■□□□ 1.63
U2AF1-204ENST00000459639 TLR5O60602 858 aa25.24■■□□□ 1.63
U2AF1-204ENST00000459639 PAGE1O75459 146 aa25.24■■□□□ 1.63
U2AF1-204ENST00000459639 STIP1P31948 543 aaKnown RBP25.24■■□□□ 1.63
U2AF1-204ENST00000459639 ADCY8P40145 1251 aa25.24■■□□□ 1.63
U2AF1-204ENST00000459639 ATP5OP48047 213 aa25.24■■□□□ 1.63
U2AF1-204ENST00000459639 PLTPP55058 493 aa25.24■■□□□ 1.63
U2AF1-204ENST00000459639 TAF12Q16514 161 aa25.24■■□□□ 1.63
U2AF1-204ENST00000459639 CDKL3Q8IVW4 592 aaPredicted RBP25.24■■□□□ 1.63
U2AF1-204ENST00000459639 KLHL5Q96PQ7 755 aa25.24■■□□□ 1.63
U2AF1-204ENST00000459639 ENTPD7Q9NQZ7 604 aa25.24■■□□□ 1.63
U2AF1-204ENST00000459639 UXTQ9UBK9 157 aaPredicted RBP25.24■■□□□ 1.63
U2AF1-204ENST00000459639 OBSL1O75147 1896 aa25.24■■□□□ 1.63
U2AF1-204ENST00000459639 ANAPC1Q9H1A4 1944 aa25.24■■□□□ 1.63
U2AF1-204ENST00000459639 BCLAF3A2AJT9 711 aaKnown RBP25.23■■□□□ 1.63
U2AF1-204ENST00000459639 APOEP02649 317 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms