RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 MMRN1Q13201 1228 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 DGKZQ13574 1117 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 PRKG1Q13976 671 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 FRG1Q14331 258 aaKnown RBP3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 PRPSAP1Q14558 356 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 TTLL4Q14679 1199 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 KCTD2Q14681 263 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 MAPRE2Q15555 327 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 TRIP10Q15642 601 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 ADRM1Q16186 407 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 DPYSL2Q16555 572 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 UGP2Q16851 508 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 C15orf59Q2T9L4 293 aaPredicted RBP3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 C11orf91Q3C1V1 193 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 GRAMD1BQ3KR37 738 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 MMEL1Q495T6 779 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 ANKRD20A4Q4UJ75 823 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 PLEKHG4Q58EX7 1191 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 DALRD3Q5D0E6 543 aaKnown RBP3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 SH3D19Q5HYK7 790 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 MDH1BQ5I0G3 518 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 CELF3Q5SZQ8 465 aaKnown RBP3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 RARS2Q5T160 578 aaKnown RBP3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 NBPF12Q5TAG4 269 aaPredicted RBP3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 GRTP1Q5TC63 336 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 FAXCQ5TGI0 409 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 METTL21CQ5VZV1 264 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 PDPK2PQ6A1A2 396 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 SCARA3Q6AZY7 606 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 ITPRIPL1Q6GPH6 555 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 EFCAB12Q6NXP0 572 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 ZFP1Q6P2D0 407 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 PACS1Q6VY07 963 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 GADL1Q6ZQY3 521 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 DENND5BQ6ZUT9 1274 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 TTC7BQ86TV6 843 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 CAND1Q86VP6 1230 aaKnown RBP3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 LCA5Q86VQ0 697 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 UNC93AQ86WB7 457 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 TMEM126BQ8IUX1 230 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 PSTKQ8IV42 348 aaKnown RBP3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 IGDCC3Q8IVU1 814 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 LRRC71Q8N4P6 559 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 ZNF276Q8N554 614 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 PQLC3Q8N755 202 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 C1orf127Q8N9H9 656 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 OR6Y1Q8NGX8 325 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 UBA3Q8TBC4 463 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 RDH11Q8TC12 318 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 ACTRT2Q8TDY3 377 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 SLC26A7Q8TE54 656 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 ZNF483Q8TF39 744 aaPredicted RBP3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 GDPD5Q8WTR4 605 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 GTF3C2Q8WUA4 911 aaPredicted RBP3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 WDR60Q8WVS4 1066 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 NLRP7Q8WX94 980 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 HTR3CQ8WXA8 447 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 DLG3Q92796 817 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 PTPRN2Q92932 1015 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 FAM136AQ96C01 138 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 ZBTB10Q96DT7 871 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 KIF12Q96FN5 646 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 WNK4Q96J92 1243 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 CLMNQ96JQ2 1002 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 ZFRQ96KR1 1074 aaKnown RBP3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 LRGUKQ96M69 825 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 SPATA33Q96N06 139 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 SPATA13Q96N96 652 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 PPP1R2P1Q96PQ5 205 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 BTBD9Q96Q07 612 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 PEBP4Q96S96 227 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 TSPAN18Q96SJ8 248 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 GPR20Q99678 358 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 WDR83Q9BRX9 315 aaKnown RBP3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 RTKNQ9BST9 563 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 MECRQ9BV79 373 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 SNRNP25Q9BV90 132 aaKnown RBP3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 BRD8Q9H0E9 1235 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 SNX25Q9H3E2 840 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 DHX35Q9H5Z1 703 aaKnown RBP3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 LRRC40Q9H9A6 602 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 PLEKHA5Q9HAU0 1116 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 USP29Q9HBJ7 922 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 GBA2Q9HCG7 927 aaPredicted RBP3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 S100A14Q9HCY8 104 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 PTPRHQ9HD43 1115 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 DMAP1Q9NPF5 467 aaPredicted RBP3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 GPATCH2LQ9NWQ4 482 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 ZDHHC7Q9NXF8 308 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 DPP3Q9NY33 737 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 ETAA1Q9NY74 926 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.43□□□□□ -1.866e-6■□□□□ 11.2
HMGN1P18-201ENST00000457642 ERAP1Q9NZ08 941 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 BFARQ9NZS9 450 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 C6orf203Q9P0P8 240 aaPredicted RBP3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 EPS15L1Q9UBC2 864 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 VTI1BQ9UEU0 232 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 MARCOQ9UEW3 520 aaPredicted RBP3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 SLC7A8Q9UHI5 535 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 CYTH4Q9UIA0 394 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms