RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 ARPINQ7Z6K5 226 aa14.02□□□□□ -0.16
TOP3B-213ENST00000457179 ZMAT2Q96NC0 199 aaKnown RBP14.02□□□□□ -0.16
TOP3B-213ENST00000457179 GCNAQ96QF7 691 aa14.02□□□□□ -0.16
TOP3B-213ENST00000457179 CPXM1Q96SM3 734 aa14.02□□□□□ -0.16
TOP3B-213ENST00000457179 KLHL4Q9C0H6 718 aa14.02□□□□□ -0.16
TOP3B-213ENST00000457179 PTPRHQ9HD43 1115 aa14.02□□□□□ -0.16
TOP3B-213ENST00000457179 ARHGEF4Q9NR80 690 aa14.02□□□□□ -0.16
TOP3B-213ENST00000457179 MARCOQ9UEW3 520 aaPredicted RBP14.02□□□□□ -0.16
TOP3B-213ENST00000457179 SCINQ9Y6U3 715 aa14.02□□□□□ -0.16
TOP3B-213ENST00000457179 ATP9BO43861 1147 aa14.02□□□□□ -0.17
TOP3B-213ENST00000457179 CLPTM1O96005 669 aa14.02□□□□□ -0.17
TOP3B-213ENST00000457179 KRT3P12035 628 aa14.02□□□□□ -0.17
TOP3B-213ENST00000457179 MMP8P22894 467 aa14.02□□□□□ -0.17
TOP3B-213ENST00000457179 PCSK6P29122 969 aa14.02□□□□□ -0.17
TOP3B-213ENST00000457179 SERPINB6P35237 376 aa14.02□□□□□ -0.17
TOP3B-213ENST00000457179 MLH1P40692 756 aa14.02□□□□□ -0.17
TOP3B-213ENST00000457179 ACTR3P61158 418 aa14.02□□□□□ -0.17
TOP3B-213ENST00000457179 DCTN2Q13561 401 aaKnown RBP14.02□□□□□ -0.17
TOP3B-213ENST00000457179 GRB14Q14449 540 aa14.02□□□□□ -0.17
TOP3B-213ENST00000457179 TAF5Q15542 800 aa14.02□□□□□ -0.17
TOP3B-213ENST00000457179 CCNG2Q16589 344 aa14.02□□□□□ -0.17
TOP3B-213ENST00000457179 NADK2Q4G0N4 442 aa14.02□□□□□ -0.17
TOP3B-213ENST00000457179 RAB6CQ53S08 254 aa14.02□□□□□ -0.17
TOP3B-213ENST00000457179 NET1Q7Z628 596 aaPredicted RBP14.02□□□□□ -0.17
TOP3B-213ENST00000457179 ZFP42Q96MM3 310 aa14.02□□□□□ -0.17
TOP3B-213ENST00000457179 SLITRK1Q96PX8 696 aa14.02□□□□□ -0.17
TOP3B-213ENST00000457179 RAB6CQ9H0N0 254 aa14.02□□□□□ -0.17
TOP3B-213ENST00000457179 CYTH4Q9UIA0 394 aa14.02□□□□□ -0.17
TOP3B-213ENST00000457179 BARX2Q9UMQ3 279 aaPredicted RBP14.02□□□□□ -0.17
TOP3B-213ENST00000457179 NEU2Q9Y3R4 380 aa14.02□□□□□ -0.17
TOP3B-213ENST00000457179 HEMK1Q9Y5R4 338 aaPredicted RBP14.02□□□□□ -0.17
TOP3B-213ENST00000457179 TRIM43BA6NCK2 446 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 PSTPIP1O43586 416 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 BUD23O43709 281 aaKnown RBP14.01□□□□□ -0.17
TOP3B-213ENST00000457179 GAS2O43903 313 aaKnown RBP14.01□□□□□ -0.17
TOP3B-213ENST00000457179 BGNP21810 368 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 CCR3P51677 355 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 CHN2P52757 468 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 MSLNQ13421 630 aaPredicted RBP14.01□□□□□ -0.17
TOP3B-213ENST00000457179 FAM102AQ5T9C2 384 aaPredicted RBP14.01□□□□□ -0.17
TOP3B-213ENST00000457179 MFSD4BQ5TF39 518 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 OR6B2Q6IFH4 312 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 DNAJC14Q6Y2X3 702 aaPredicted RBP14.01□□□□□ -0.17
TOP3B-213ENST00000457179 DHDDSQ86SQ9 333 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 WDTC1Q8N5D0 677 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 PIP4K2CQ8TBX8 421 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 GDPD5Q8WTR4 605 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 GAB3Q8WWW8 586 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 PIWIL1Q96J94 861 aaKnown RBP14.01□□□□□ -0.17
TOP3B-213ENST00000457179 AP5M1Q9H0R1 490 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 KCNK13Q9HB14 408 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 IP6K2Q9UHH9 426 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 LCTP09848 1927 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 LOXHD1Q8IVV2 1947 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 DNAJC6O75061 913 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 PDE5AO76074 875 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 CD48P09326 243 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 IGFBP6P24592 240 aaPredicted RBP14.01□□□□□ -0.17
TOP3B-213ENST00000457179 ADORA2BP29275 332 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 PHF13Q86YI8 300 aaPredicted RBP14.01□□□□□ -0.17
TOP3B-213ENST00000457179 TMPRSS6Q8IU80 811 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 KATNAL2Q8IYT4 538 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 ZNF398Q8TD17 642 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 B3GNT5Q9BYG0 378 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 APPL1Q9UKG1 709 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 FAF1Q9UNN5 650 aaPredicted RBP14.01□□□□□ -0.17
TOP3B-213ENST00000457179 MTO1Q9Y2Z2 717 aaKnown RBP14.01□□□□□ -0.17
TOP3B-213ENST00000457179 TIMM13Q9Y5L4 95 aaPredicted RBP14.01□□□□□ -0.17
TOP3B-213ENST00000457179 MYADML2A6NDP7 307 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 TMEM191CA6NGB0 347 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 MEIS3P2A8K0S8 358 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 TPD52L2O43399 206 aaKnown RBP14.01□□□□□ -0.17
TOP3B-213ENST00000457179 RAP1GDS1P52306 607 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 ALDH18A1P54886 795 aaKnown RBP14.01□□□□□ -0.17
TOP3B-213ENST00000457179 KBTBD12Q3ZCT8 623 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 FBXL19Q6PCT2 694 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 KLHL35Q6PF15 583 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 SCUBE3Q8IX30 993 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 EXOC8Q8IYI6 725 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 EXD1Q8NHP7 514 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 ELOVL4Q9GZR5 314 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 PCDH18Q9HCL0 1135 aa14.01□□□□□ -0.17
TOP3B-213ENST00000457179 NGRNQ9NPE2 291 aaKnown RBP14.01□□□□□ -0.17
TOP3B-213ENST00000457179 F8W8V4 182 aa14□□□□□ -0.17
TOP3B-213ENST00000457179 SPECC1L-ADORA2AF8WAN1 911 aa14□□□□□ -0.17
TOP3B-213ENST00000457179 LIASO43766 372 aa14□□□□□ -0.17
TOP3B-213ENST00000457179 RECQL4O94761 1208 aa14□□□□□ -0.17
TOP3B-213ENST00000457179 SORBS2O94875 1100 aaKnown RBP14□□□□□ -0.17
TOP3B-213ENST00000457179 ITGBL1O95965 494 aaPredicted RBP14□□□□□ -0.17
TOP3B-213ENST00000457179 ZNF24P17028 368 aa14□□□□□ -0.17
TOP3B-213ENST00000457179 ZNF618Q5T7W0 954 aa14□□□□□ -0.17
TOP3B-213ENST00000457179 TRIM72Q6ZMU5 477 aa14□□□□□ -0.17
TOP3B-213ENST00000457179 SPOCD1Q6ZMY3 1216 aa14□□□□□ -0.17
TOP3B-213ENST00000457179 PRPF39Q86UA1 669 aaKnown RBP14□□□□□ -0.17
TOP3B-213ENST00000457179 NETO2Q8NC67 525 aa14□□□□□ -0.17
TOP3B-213ENST00000457179 GCOM2Q9BZD3 368 aaPredicted RBP14□□□□□ -0.17
TOP3B-213ENST00000457179 INIPQ9NRY2 104 aa14□□□□□ -0.17
TOP3B-213ENST00000457179 MRPL42Q9Y6G3 142 aaKnown RBP14□□□□□ -0.17
TOP3B-213ENST00000457179 OTOFQ9HC10 1997 aa14□□□□□ -0.17
TOP3B-213ENST00000457179 WDR81Q562E7 1941 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms