RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 ZNF143P52747 638 aaPredicted RBP14.68□□□□□ -0.06
SMPD4-215ENST00000457039 ATXN1P54253 815 aaKnown RBP14.68□□□□□ -0.06
SMPD4-215ENST00000457039 GALCP54803 685 aa14.68□□□□□ -0.06
SMPD4-215ENST00000457039 OGDHQ02218 1023 aa14.68□□□□□ -0.06
SMPD4-215ENST00000457039 NME3Q13232 169 aa14.68□□□□□ -0.06
SMPD4-215ENST00000457039 C15orf59Q2T9L4 293 aaPredicted RBP14.68□□□□□ -0.06
SMPD4-215ENST00000457039 RAB6CQ53S08 254 aa14.68□□□□□ -0.06
SMPD4-215ENST00000457039 FAM133BQ5BKY9 247 aaKnown RBP14.68□□□□□ -0.06
SMPD4-215ENST00000457039 ADGRF1Q5T601 910 aa14.68□□□□□ -0.06
SMPD4-215ENST00000457039 SH3PXD2AQ5TCZ1 1133 aa14.68□□□□□ -0.06
SMPD4-215ENST00000457039 NADSYN1Q6IA69 706 aa14.68□□□□□ -0.06
SMPD4-215ENST00000457039 BMP8AQ7Z5Y6 402 aa14.68□□□□□ -0.06
SMPD4-215ENST00000457039 TMEM139Q8IV31 216 aa14.68□□□□□ -0.06
SMPD4-215ENST00000457039 ZNF687Q8N1G0 1237 aa14.68□□□□□ -0.06
SMPD4-215ENST00000457039 RAB6CQ9H0N0 254 aa14.68□□□□□ -0.06
SMPD4-215ENST00000457039 ANLNQ9NQW6 1124 aa14.68□□□□□ -0.06
SMPD4-215ENST00000457039 SPTLC3Q9NUV7 552 aa14.68□□□□□ -0.06
SMPD4-215ENST00000457039 TMEM51Q9NW97 253 aa14.68□□□□□ -0.06
SMPD4-215ENST00000457039 ARHGEF38Q9NXL2 777 aa14.68□□□□□ -0.06
SMPD4-215ENST00000457039 COX16Q9P0S2 106 aa14.68□□□□□ -0.06
SMPD4-215ENST00000457039 XPO7Q9UIA9 1087 aaKnown RBP14.68□□□□□ -0.06
SMPD4-215ENST00000457039 TMEM191CA6NGB0 347 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 LCA5LO95447 670 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 ADH1CP00326 375 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 APOEP02649 317 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 SLC2A3P11169 496 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 ADH5P11766 374 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 SLC6A4P31645 630 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 RDXP35241 583 aaKnown RBP14.67□□□□□ -0.06
SMPD4-215ENST00000457039 OPRD1P41143 372 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 SLC11A2P49281 568 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 VCPP55072 806 aaKnown RBP14.67□□□□□ -0.06
SMPD4-215ENST00000457039 ATP11AP98196 1134 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 GAD2Q05329 585 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 DEUP1Q05D60 604 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 ZNF252P-AS1Q0IIN9 211 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 NR1H3Q13133 447 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 BRMS1LQ5PSV4 323 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 FYB2Q5VWT5 728 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 CWF19L1Q69YN2 538 aaKnown RBP14.67□□□□□ -0.06
SMPD4-215ENST00000457039 DCUN1D2Q6PH85 259 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 C1orf228Q6PIY5 440 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 STRADAQ7RTN6 431 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 ETFBKMTQ8IXQ9 262 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 CCDC170Q8IYT3 715 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 FNIP1Q8TF40 1166 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 ARHGEF26Q96DR7 871 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 SHDQ96IW2 340 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 BTN2A3PQ96KV6 586 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 PACSIN1Q9BY11 444 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 TRIM7Q9C029 511 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 TBC1D17Q9HA65 648 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 MYO1AQ9UBC5 1043 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 SCINQ9Y6U3 715 aa14.67□□□□□ -0.06
SMPD4-215ENST00000457039 F5P12259 2224 aa14.66□□□□□ -0.06
SMPD4-215ENST00000457039 GOLGA6L7A0A1B0GV03 622 aa14.66□□□□□ -0.06
SMPD4-215ENST00000457039 KANSL1LA0AUZ9 987 aa14.66□□□□□ -0.06
SMPD4-215ENST00000457039 MAN2B1O00754 1011 aa14.66□□□□□ -0.06
SMPD4-215ENST00000457039 TRDMT1O14717 391 aaKnown RBP14.66□□□□□ -0.06
SMPD4-215ENST00000457039 CCP110O43303 1012 aa14.66□□□□□ -0.06
SMPD4-215ENST00000457039 GPR37L1O60883 481 aa14.66□□□□□ -0.06
SMPD4-215ENST00000457039 MOCS2O96007 188 aaPredicted RBP14.66□□□□□ -0.06
SMPD4-215ENST00000457039 PENKP01210 267 aaPredicted RBP14.66□□□□□ -0.06
SMPD4-215ENST00000457039 CD72P21854 359 aa14.66□□□□□ -0.06
SMPD4-215ENST00000457039 HDAC4P56524 1084 aa14.66□□□□□ -0.06
SMPD4-215ENST00000457039 RNF43Q68DV7 783 aa14.66□□□□□ -0.06
SMPD4-215ENST00000457039 NAIF1Q69YI7 327 aaPredicted RBP14.66□□□□□ -0.06
SMPD4-215ENST00000457039 ZNF852Q6ZMS4 543 aa14.66□□□□□ -0.06
SMPD4-215ENST00000457039 TPGS1Q6ZTW0 290 aa14.66□□□□□ -0.06
SMPD4-215ENST00000457039 C12orf40Q86WS4 652 aa14.66□□□□□ -0.06
SMPD4-215ENST00000457039 TMTC1Q8IUR5 882 aa14.66□□□□□ -0.06
SMPD4-215ENST00000457039 FAM172AQ8WUF8 416 aa14.66□□□□□ -0.06
SMPD4-215ENST00000457039 FAM3CQ92520 227 aa14.66□□□□□ -0.06
SMPD4-215ENST00000457039 PRMT1Q99873 361 aaKnown RBP14.66□□□□□ -0.06
SMPD4-215ENST00000457039 CNPY3Q9BT09 278 aa14.66□□□□□ -0.06
SMPD4-215ENST00000457039 IRX2Q9BZI1 471 aaPredicted RBP14.66□□□□□ -0.06
SMPD4-215ENST00000457039 MRPL47Q9HD33 250 aaKnown RBP14.66□□□□□ -0.06
SMPD4-215ENST00000457039 LTB4R2Q9NPC1 389 aa14.66□□□□□ -0.06
SMPD4-215ENST00000457039 FAM86C2PA6NEL3 165 aa14.65□□□□□ -0.06
SMPD4-215ENST00000457039 SOWAHDA6NJG2 315 aa14.65□□□□□ -0.06
SMPD4-215ENST00000457039 CACNG3O60359 315 aa14.65□□□□□ -0.06
SMPD4-215ENST00000457039 H2AFZP0C0S5 128 aa14.65□□□□□ -0.06
SMPD4-215ENST00000457039 TMEM253P0C7T8 217 aa14.65□□□□□ -0.06
SMPD4-215ENST00000457039 TYRP14679 529 aa14.65□□□□□ -0.06
SMPD4-215ENST00000457039 EIF2DP41214 584 aaKnown RBP14.65□□□□□ -0.06
SMPD4-215ENST00000457039 SLC6A11P48066 632 aa14.65□□□□□ -0.06
SMPD4-215ENST00000457039 MRE11P49959 708 aa14.65□□□□□ -0.06
SMPD4-215ENST00000457039 SGSHP51688 502 aa14.65□□□□□ -0.06
SMPD4-215ENST00000457039 AMPD2Q01433 879 aa14.65□□□□□ -0.06
SMPD4-215ENST00000457039 MTA1Q13330 715 aa14.65□□□□□ -0.06
SMPD4-215ENST00000457039 FZD5Q13467 585 aa14.65□□□□□ -0.06
SMPD4-215ENST00000457039 CDO1Q16878 200 aa14.65□□□□□ -0.06
SMPD4-215ENST00000457039 ANO4Q32M45 955 aa14.65□□□□□ -0.06
SMPD4-215ENST00000457039 MS4A13Q5J8X5 152 aa14.65□□□□□ -0.06
SMPD4-215ENST00000457039 PIK3R6Q5UE93 754 aa14.65□□□□□ -0.06
SMPD4-215ENST00000457039 RFWD3Q6PCD5 774 aa14.65□□□□□ -0.06
SMPD4-215ENST00000457039 H2AFVQ71UI9 128 aa14.65□□□□□ -0.06
SMPD4-215ENST00000457039 PHTF2Q8N3S3 785 aa14.65□□□□□ -0.06
SMPD4-215ENST00000457039 ATP6V0D2Q8N8Y2 350 aa14.65□□□□□ -0.06
SMPD4-215ENST00000457039 RNF34Q969K3 372 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms