RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 CPXM1Q96SM3 734 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 DDX50Q9BQ39 737 aaKnown RBP16.88■□□□□ 0.29
CPSF6-203ENST00000456847 SLC2A11Q9BYW1 496 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 LHX5Q9H2C1 402 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 ARRDC1-AS1Q9H2J1 176 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 PLCB1Q9NQ66 1216 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 SEMA4GQ9NTN9 838 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 CACNA2D2Q9NY47 1150 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 STOML2Q9UJZ1 356 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 HCN2Q9UL51 889 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 TLR6Q9Y2C9 796 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 ACSL4O60488 711 aa16.87■□□□□ 0.29
CPSF6-203ENST00000456847 MOCS2O96007 188 aaPredicted RBP16.87■□□□□ 0.29
CPSF6-203ENST00000456847 APOEP02649 317 aa16.87■□□□□ 0.29
CPSF6-203ENST00000456847 UCHL3P15374 230 aa16.87■□□□□ 0.29
CPSF6-203ENST00000456847 HOXD9P28356 352 aaPredicted RBP16.87■□□□□ 0.29
CPSF6-203ENST00000456847 YWHAZP63104 245 aaKnown RBP16.87■□□□□ 0.29
CPSF6-203ENST00000456847 ARID5AQ03989 594 aa16.87■□□□□ 0.29
CPSF6-203ENST00000456847 NNTQ13423 1086 aa16.87■□□□□ 0.29
CPSF6-203ENST00000456847 SYPL2Q5VXT5 272 aa16.87■□□□□ 0.29
CPSF6-203ENST00000456847 OR6B2Q6IFH4 312 aa16.87■□□□□ 0.29
CPSF6-203ENST00000456847 BEND5Q7L4P6 421 aa16.87■□□□□ 0.29
CPSF6-203ENST00000456847 ZC3H10Q96K80 434 aaKnown RBP16.87■□□□□ 0.29
CPSF6-203ENST00000456847 FCRL2Q96LA5 508 aaPredicted RBP16.87■□□□□ 0.29
CPSF6-203ENST00000456847 CIPCQ9C0C6 399 aa16.87■□□□□ 0.29
CPSF6-203ENST00000456847 DUSP15Q9H1R2 295 aaPredicted RBP16.87■□□□□ 0.29
CPSF6-203ENST00000456847 FAM204AQ9H8W3 233 aa16.87■□□□□ 0.29
CPSF6-203ENST00000456847 CLEC4EQ9ULY5 219 aa16.87■□□□□ 0.29
CPSF6-203ENST00000456847 GOLGA6L7A0A1B0GV03 622 aa16.86■□□□□ 0.29
CPSF6-203ENST00000456847 TYW5A2RUC4 315 aaKnown RBP16.86■□□□□ 0.29
CPSF6-203ENST00000456847 TAF3Q5VWG9 929 aa16.86■□□□□ 0.29
CPSF6-203ENST00000456847 DPY19L2P1Q6NXN4 242 aa16.86■□□□□ 0.29
CPSF6-203ENST00000456847 RFWD3Q6PCD5 774 aa16.86■□□□□ 0.29
CPSF6-203ENST00000456847 WDTC1Q8N5D0 677 aa16.86■□□□□ 0.29
CPSF6-203ENST00000456847 PIWIL1Q96J94 861 aaKnown RBP16.86■□□□□ 0.29
CPSF6-203ENST00000456847 PCMTD1Q96MG8 357 aaPredicted RBP16.86■□□□□ 0.29
CPSF6-203ENST00000456847 RAD54BQ9Y620 910 aa16.86■□□□□ 0.29
CPSF6-203ENST00000456847 PLXND1Q9Y4D7 1925 aa16.86■□□□□ 0.29
CPSF6-203ENST00000456847 TBL1XO60907 577 aa16.86■□□□□ 0.29
CPSF6-203ENST00000456847 CDK11BP21127 795 aaKnown RBP16.86■□□□□ 0.29
CPSF6-203ENST00000456847 COPB1P53618 953 aaKnown RBP16.86■□□□□ 0.29
CPSF6-203ENST00000456847 BYSLQ13895 437 aaKnown RBP16.86■□□□□ 0.29
CPSF6-203ENST00000456847 STARD3Q14849 445 aa16.86■□□□□ 0.29
CPSF6-203ENST00000456847 E2F5Q15329 346 aa16.86■□□□□ 0.29
CPSF6-203ENST00000456847 CCDC6Q16204 474 aa16.86■□□□□ 0.29
CPSF6-203ENST00000456847 CSRP2Q16527 193 aa16.86■□□□□ 0.29
CPSF6-203ENST00000456847 DCAF6Q58WW2 860 aa16.86■□□□□ 0.29
CPSF6-203ENST00000456847 EFHC1Q5JVL4 640 aa16.86■□□□□ 0.29
CPSF6-203ENST00000456847 FAM183BPQ6ZVS7 135 aa16.86■□□□□ 0.29
CPSF6-203ENST00000456847 RLN3Q8WXF3 142 aa16.86■□□□□ 0.29
CPSF6-203ENST00000456847 STIM2Q9P246 746 aa16.86■□□□□ 0.29
CPSF6-203ENST00000456847 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.86■□□□□ 0.29
CPSF6-203ENST00000456847 STON1Q9Y6Q2 735 aa16.86■□□□□ 0.29
CPSF6-203ENST00000456847 SYNJ2BP-COX16A0A087WUM0 186 aa16.85■□□□□ 0.29
CPSF6-203ENST00000456847 F8VZ95 297 aa16.85■□□□□ 0.29
CPSF6-203ENST00000456847 GFRA2O00451 464 aa16.85■□□□□ 0.29
CPSF6-203ENST00000456847 IRAK2O43187 625 aa16.85■□□□□ 0.29
CPSF6-203ENST00000456847 MAP3K13O43283 966 aa16.85■□□□□ 0.29
CPSF6-203ENST00000456847 HSF2BPO75031 334 aa16.85■□□□□ 0.29
CPSF6-203ENST00000456847 GRAP2O75791 330 aa16.85■□□□□ 0.29
CPSF6-203ENST00000456847 TRUB2O95900 331 aaKnown RBP16.85■□□□□ 0.29
CPSF6-203ENST00000456847 ERBB2P04626 1255 aa16.85■□□□□ 0.29
CPSF6-203ENST00000456847 CYP11B1P15538 503 aa16.85■□□□□ 0.29
CPSF6-203ENST00000456847 GABRG2P18507 467 aa16.85■□□□□ 0.29
CPSF6-203ENST00000456847 BCKDHBP21953 392 aa16.85■□□□□ 0.29
CPSF6-203ENST00000456847 TGM1P22735 817 aa16.85■□□□□ 0.29
CPSF6-203ENST00000456847 SLC6A4P31645 630 aa16.85■□□□□ 0.29
CPSF6-203ENST00000456847 KLK7P49862 253 aa16.85■□□□□ 0.29
CPSF6-203ENST00000456847 SGSHP51688 502 aa16.85■□□□□ 0.29
CPSF6-203ENST00000456847 TYRO3Q06418 890 aa16.85■□□□□ 0.29
CPSF6-203ENST00000456847 EIF4HQ15056 248 aaKnown RBP16.85■□□□□ 0.29
CPSF6-203ENST00000456847 TAF5Q15542 800 aa16.85■□□□□ 0.29
CPSF6-203ENST00000456847 RSPO4Q2I0M5 234 aaPredicted RBP16.85■□□□□ 0.29
CPSF6-203ENST00000456847 FAM133BQ5BKY9 247 aaKnown RBP16.85■□□□□ 0.29
CPSF6-203ENST00000456847 PRR23CQ6ZRP0 262 aa16.85■□□□□ 0.29
CPSF6-203ENST00000456847 HJURPQ8NCD3 748 aaPredicted RBP16.85■□□□□ 0.29
CPSF6-203ENST00000456847 TMEM35BQ8NCS4 154 aa16.85■□□□□ 0.29
CPSF6-203ENST00000456847 OLIG1Q8TAK6 271 aa16.85■□□□□ 0.29
CPSF6-203ENST00000456847 RMDN1Q96DB5 314 aa16.85■□□□□ 0.29
CPSF6-203ENST00000456847 GABRG3Q99928 467 aa16.85■□□□□ 0.29
CPSF6-203ENST00000456847 NAA15Q9BXJ9 866 aaKnown RBP16.85■□□□□ 0.29
CPSF6-203ENST00000456847 STK33Q9BYT3 514 aa16.85■□□□□ 0.29
CPSF6-203ENST00000456847 FAM207AQ9NSI2 230 aaPredicted RBP16.85■□□□□ 0.29
CPSF6-203ENST00000456847 COX16Q9P0S2 106 aa16.85■□□□□ 0.29
CPSF6-203ENST00000456847 TMEM63CQ9P1W3 806 aa16.85■□□□□ 0.29
CPSF6-203ENST00000456847 CDV3Q9UKY7 258 aaKnown RBP16.85■□□□□ 0.29
CPSF6-203ENST00000456847 A0A1W2PQF6 199 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 PRR5-ARHGAP8B1AHC4 643 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 GLI1P08151 1106 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 MPLP40238 635 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 ARHGAP8P85298 464 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 CDK17Q00537 523 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 CREB5Q02930 508 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 PTPN20Q4JDL3 420 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 PIK3R6Q5UE93 754 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 PMS2CLQ68D20 193 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 NADSYN1Q6IA69 706 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 KIAA1211LQ6NV74 962 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 DEFB106AQ8N104 65 aa16.84■□□□□ 0.29
CPSF6-203ENST00000456847 AOPEPQ8N6M6 819 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms