RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 HAO1Q9UJM8 370 aa18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 NUMBLQ9Y6R0 609 aa18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 CSH1P0DML2 217 aa18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 CSH2P0DML3 217 aa18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 SULT1E1P49888 294 aa18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 CRYBB1P53674 252 aaPredicted RBP18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 NBPF20Q3BBV1 942 aa18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 PAQR9Q6ZVX9 377 aa18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 BZW1Q7L1Q6 419 aaKnown RBP18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 FAM131BQ86XD5 332 aa18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 TFB1MQ8WVM0 346 aaKnown RBP18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 TTC17Q96AE7 1141 aa18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 RAB3IPQ96QF0 476 aaPredicted RBP18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 TRIM56Q9BRZ2 755 aaKnown RBP18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 PCDHA11Q9Y5I1 949 aa18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 TRIP12Q14669 1992 aaPredicted RBP18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 A0A0A0MRY4 1105 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 KLF11O14901 512 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 BGNP21810 368 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 LRPAP1P30533 357 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 ARL4AP40617 200 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 ADIGQ0VDE8 80 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 MAP2K5Q13163 448 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 TAF1BQ53T94 588 aaPredicted RBP18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 ANKRD20A2Q5SQ80 823 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 ANKRD20A1Q5TYW2 823 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 ANKRD20A3Q5VUR7 823 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 TRMT10BQ6PF06 316 aaKnown RBP18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 CYS1Q717R9 158 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 KCTD13Q8WZ19 329 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 OXNAD1Q96HP4 312 aaPredicted RBP18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 SPATA13Q96N96 652 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 TRIM55Q9BYV6 548 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 KCNK13Q9HB14 408 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 ARHGEF4Q9NR80 690 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 PLLPQ9Y342 182 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 MAD1L1Q9Y6D9 718 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 HMX2A2RU54 273 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 TRAFD1O14545 582 aaPredicted RBP18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 BEST1O76090 585 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 FAM163BP0C2L3 166 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 FDFT1P37268 417 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 ZNF157P51786 506 aaPredicted RBP18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 PITX1P78337 314 aaPredicted RBP18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 MRPS5P82675 430 aaKnown RBP18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 CTC1Q2NKJ3 1217 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 STEAP4Q687X5 459 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 MTDHQ86UE4 582 aaKnown RBP18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 MTBPQ96DY7 904 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 NPY6RQ99463 290 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 SAR1AQ9NR31 198 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 ZFP69BQ9UJL9 534 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 DCTN4Q9UJW0 460 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 NR2E3Q9Y5X4 410 aa18.97■□□□□ 0.63
SEMA3B-209ENST00000456560 CLDN5O00501 218 aa18.96■□□□□ 0.63
SEMA3B-209ENST00000456560 MLNP12872 115 aa18.96■□□□□ 0.63
SEMA3B-209ENST00000456560 PTPN1P18031 435 aaKnown RBP18.96■□□□□ 0.63
SEMA3B-209ENST00000456560 NOS2P35228 1153 aa18.96■□□□□ 0.63
SEMA3B-209ENST00000456560 SAPCD2Q86UD0 394 aa18.96■□□□□ 0.63
SEMA3B-209ENST00000456560 MOCS1Q9NZB8 636 aa18.96■□□□□ 0.63
SEMA3B-209ENST00000456560 PTGESO14684 152 aa18.96■□□□□ 0.63
SEMA3B-209ENST00000456560 MFSD11O43934 449 aa18.96■□□□□ 0.63
SEMA3B-209ENST00000456560 KRT38O76015 456 aa18.96■□□□□ 0.63
SEMA3B-209ENST00000456560 WFS1O76024 890 aa18.96■□□□□ 0.63
SEMA3B-209ENST00000456560 NPR3P17342 541 aa18.96■□□□□ 0.63
SEMA3B-209ENST00000456560 CDK16Q00536 496 aa18.96■□□□□ 0.63
SEMA3B-209ENST00000456560 DCAF6Q58WW2 860 aa18.96■□□□□ 0.63
SEMA3B-209ENST00000456560 DENND5BQ6ZUT9 1274 aa18.96■□□□□ 0.63
SEMA3B-209ENST00000456560 CLNKQ7Z7G1 428 aa18.96■□□□□ 0.63
SEMA3B-209ENST00000456560 SLC2A13Q96QE2 648 aa18.96■□□□□ 0.63
SEMA3B-209ENST00000456560 LGMNQ99538 433 aa18.96■□□□□ 0.63
SEMA3B-209ENST00000456560 TRPM7Q96QT4 1865 aa18.95■□□□□ 0.62
SEMA3B-209ENST00000456560 CYB561D2O14569 222 aa18.95■□□□□ 0.62
SEMA3B-209ENST00000456560 GABRDO14764 452 aa18.95■□□□□ 0.62
SEMA3B-209ENST00000456560 MYL3P08590 195 aa18.95■□□□□ 0.62
SEMA3B-209ENST00000456560 BMPR2Q13873 1038 aa18.95■□□□□ 0.62
SEMA3B-209ENST00000456560 HACE1Q8IYU2 909 aa18.95■□□□□ 0.62
SEMA3B-209ENST00000456560 NME8Q8N427 588 aa18.95■□□□□ 0.62
SEMA3B-209ENST00000456560 RNF139Q8WU17 664 aa18.95■□□□□ 0.62
SEMA3B-209ENST00000456560 FAM149B1Q96BN6 582 aa18.95■□□□□ 0.62
SEMA3B-209ENST00000456560 PPP1R10Q96QC0 940 aaKnown RBP18.95■□□□□ 0.62
SEMA3B-209ENST00000456560 TMPRSS4Q9NRS4 437 aa18.95■□□□□ 0.62
SEMA3B-209ENST00000456560 CPA4Q9UI42 421 aa18.95■□□□□ 0.62
SEMA3B-209ENST00000456560 H3BRJ5 948 aa18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 DNAJC6O75061 913 aa18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 SKAP2O75563 359 aaPredicted RBP18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 ALDH1A2O94788 518 aa18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 CBX6O95503 412 aa18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 DLDP09622 509 aaKnown RBP18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 ACAT1P24752 427 aaKnown RBP18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 HOXC8P31273 242 aa18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 GLUD2P49448 558 aa18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 NDUFV1P49821 464 aa18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 CPT1AP50416 773 aa18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 SERPINB9P50453 376 aa18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 ARFIP2P53365 341 aa18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 SARNPP82979 210 aaKnown RBP18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 KIAA0319Q5VV43 1072 aa18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 WSCD1Q658N2 575 aa18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 TIFABQ6ZNK6 161 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms