RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 ZNF23P17027 643 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 DESP17661 470 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 CYP3A5P20815 502 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 CDKN2BP42772 138 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 HDAC4P56524 1084 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 ZNF543Q08ER8 600 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 SLC13A2Q13183 592 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 POLD3Q15054 466 aaPredicted RBP4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 PGS1Q32NB8 556 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 BBS9Q3SYG4 887 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 SLC9B1Q4ZJI4 515 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 DEPDC1Q5TB30 811 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 IL31Q6EBC2 164 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 OLFML1Q6UWY5 402 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 NPNTQ6UXI9 565 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 KYAT3Q6YP21 454 aaKnown RBP4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 TMEM26Q6ZUK4 368 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 RFPL4BQ6ZWI9 263 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 CMC1Q7Z7K0 106 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 USP37Q86T82 979 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 LGI2Q8N0V4 545 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 CERS5Q8N5B7 392 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 ANKK1Q8NFD2 765 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 USP13Q92995 863 aaPredicted RBP4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 FAR2Q96K12 515 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 TSPAN18Q96SJ8 248 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 STN1Q9H668 368 aaKnown RBP4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 SUDS3Q9H7L9 328 aaPredicted RBP4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 STRIP2Q9ULQ0 834 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 POLIQ9UNA4 740 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 USP22Q9UPT9 525 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 PLLPQ9Y342 182 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 PPME1Q9Y570 386 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 SHROOM3Q8TF72 1996 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 SCN7AQ01118 1682 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 GAKO14976 1311 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 ASTN2O75129 1339 aaPredicted RBP4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 IGKV6D-41A0A0C4DH26 115 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 CCDC160A6NGH7 325 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 H3BMQ9 156 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 GZMAP12544 262 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 CHRM3P20309 590 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 MATN1P21941 496 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 AXLP30530 894 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 LIG4P49917 911 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 DYNLT1P63172 113 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 UGT3A2Q3SY77 523 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 SLC4A11Q8NBS3 891 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 STARD8Q92502 1023 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 COG8Q96MW5 612 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 TRIM55Q9BYV6 548 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 LRRC27Q9C0I9 530 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 RPF2Q9H7B2 306 aaKnown RBP4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 VPS37BQ9H9H4 285 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 AP4E1Q9UPM8 1137 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 COQ4Q9Y3A0 265 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 ROBO3Q96MS0 1386 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 CASZ1Q86V15 1759 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 GSTTP1A0A1W2PQM5 241 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 ATP5HO75947 161 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 ALDH1A3P47895 512 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 SERPINB8P50452 374 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 PIGFQ07326 219 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 MAMLD1Q13495 774 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 LRP8Q14114 963 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 EFHC1Q5JVL4 640 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 MROH9Q5TGP6 573 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 GTF2IRD2BQ6EKJ0 949 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 ANKRD26P1Q6NSI1 321 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 EEPD1Q7L9B9 569 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 GTF2IRD2Q86UP8 949 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 CHSY1Q86X52 802 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 ZC3H7AQ8IWR0 971 aaKnown RBP4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 SYCE1Q8N0S2 351 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 OR9I1Q8NGQ6 314 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 CLEC4DQ8WXI8 215 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 BSNDQ8WZ55 320 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 TFAP2BQ92481 460 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 FKBP10Q96AY3 582 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 IQCGQ9H095 443 aaKnown RBP4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 ZNF696Q9H7X3 374 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 VWA7Q9Y334 891 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 ARAP2Q8WZ64 1704 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 A0A0X1KG70 313 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 ANKRD34BA5PLL1 514 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 ERVV-2B6SEH9 535 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 ATP2A1O14983 1001 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 KLHL41O60662 606 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 RAD17O75943 681 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 METTL18O95568 372 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 MAGP20916 626 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 MLLT3P42568 568 aaPredicted RBP4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 GJA8P48165 433 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 RACK1P63244 317 aaKnown RBP4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 DNASE1L3Q13609 305 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 PPP2R5DQ14738 602 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 PTCHD3Q3KNS1 767 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 PPP2R2DQ66LE6 453 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 TBPL2Q6SJ96 375 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 PPP1R21Q6ZMI0 780 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms