RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 JAKMIP2Q96AA8 810 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 PLD4Q96BZ4 506 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 PAGE5Q96GU1 130 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 HEXIM2Q96MH2 286 aaKnown RBP8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 GPR174Q9BXC1 333 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 MIR1-1HGQ9H1L0 117 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 CCDC86Q9H6F5 360 aaKnown RBP8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 NMUR1Q9HB89 426 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 OLA1Q9NTK5 396 aaKnown RBP8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 OSER1Q9NX31 292 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 ELOVL2Q9NXB9 296 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 PLK2Q9NYY3 685 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 MARCH2Q9P0N8 246 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 HMGXB4Q9UGU5 601 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 RASAL2Q9UJF2 1139 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 RALYQ9UKM9 306 aaKnown RBP8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 PCDHA7Q9UN72 937 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 TRAF3IP3Q9Y228 551 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 USP3Q9Y6I4 520 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 ANKRD11Q6UB99 2663 aaPredicted RBP8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 KNL1Q8NG31 2342 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 MDM4O15151 490 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 KLRC4O43908 158 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 LATS1O95835 1130 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 F13A1P00488 732 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 CD58P19256 250 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 NR2F2P24468 414 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 CASP1P29466 404 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 PSMC2P35998 433 aaKnown RBP8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 IL12RB1P42701 662 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 HARS2P49590 506 aaKnown RBP8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 FAM193AP78312 1265 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 ZBTB16Q05516 673 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 SCAPQ12770 1279 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 EFEMP1Q12805 493 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 SFSWAPQ12872 951 aaKnown RBP8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 MPPE1Q53F39 396 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 DCAF12L1Q5VU92 463 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 FYB2Q5VWT5 728 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 SPOPLQ6IQ16 392 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 SERPINA13PQ6UXR4 307 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 SCD5Q86SK9 330 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 FAM186BQ8IYM0 893 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 GALNT15Q8N3T1 639 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 ZCCHC9Q8N567 271 aaKnown RBP8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 OR2I1PQ8NGU4 316 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 DDI1Q8WTU0 396 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 GOLGA1Q92805 767 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 CCDC34Q96HJ3 373 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 PIWIL1Q96J94 861 aaKnown RBP8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 CAMK1GQ96NX5 476 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 IRX2Q9BZI1 471 aaPredicted RBP8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 CIPCQ9C0C6 399 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 MKRN2Q9H000 416 aaKnown RBP8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 SLC6A17Q9H1V8 727 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 GAREM1Q9H706 876 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 TMEM8AQ9HCN3 771 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 OSGEPQ9NPF4 335 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 TM7SF3Q9NS93 570 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 SERTAD1Q9UHV2 236 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 PCOLCE2Q9UKZ9 415 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 PLA2G4CQ9UP65 541 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 HBS1LQ9Y450 684 aaKnown RBP8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 PTPRBP23467 1997 aa8.4□□□□□ -1.06
NIF3L1-209ENST00000454952 FASNP49327 2511 aaKnown RBP8.4□□□□□ -1.07
NIF3L1-209ENST00000454952 KNTC1P50748 2209 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 GOLGA4Q13439 2230 aaKnown RBP8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 ZFHX4Q86UP3 3567 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 RCCD1A6NED2 376 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 WASH3PC4AMC7 463 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 ACTN4O43707 911 aaKnown RBP8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 DFNA5O60443 496 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 CBFA2T3O75081 653 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 KLKB1P03952 638 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 EPHX1P07099 455 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 CMA1P23946 247 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 MAOBP27338 520 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 GCLMP48507 274 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 YWHAGP61981 247 aaKnown RBP eCLIP8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 YWHAEP62258 255 aaKnown RBP8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 CAMK2GQ13555 558 aaPredicted RBP8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 ZNF234Q14588 700 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 GEN1Q17RS7 908 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 HLA-BQ31612 363 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 TTC31Q49AM3 519 aaPredicted RBP8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 PPP1R26Q5T8A7 1209 aaPredicted RBP8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 ARHGAP17Q68EM7 881 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 KRT39Q6A163 491 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 DENND1CQ8IV53 801 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 HSCBQ8IWL3 235 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 FAM217AQ8IXS0 508 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 GRAMD1CQ8IYS0 662 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 ANKRD52Q8NB46 1076 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 OR2T3Q8NH03 318 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 TAS1R2Q8TE23 839 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 RNF139Q8WU17 664 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 SNX21Q969T3 373 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 SKA1Q96BD8 255 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 TMEM176AQ96HP8 235 aa8.39□□□□□ -1.07
NIF3L1-209ENST00000454952 TWNKQ96RR1 684 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms