RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 ADRA1AP35348 466 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 ACADSBP45954 432 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 ADIGQ0VDE8 80 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 C15orf59Q2T9L4 293 aaPredicted RBP5.16□□□□□ -1.58
RIF1-207ENST00000454583 EFHC2Q5JST6 749 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 EMBQ6PCB8 327 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 TP53INP2Q8IXH6 220 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 GLIS1Q8NBF1 620 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 DQX1Q8TE96 717 aaKnown RBP5.16□□□□□ -1.58
RIF1-207ENST00000454583 TGS1Q96RS0 853 aaKnown RBP5.16□□□□□ -1.58
RIF1-207ENST00000454583 PHACTR1Q9C0D0 580 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 NKX2-4Q9H2Z4 354 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 CCDC134Q9H6E4 229 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 POPDC2Q9HBU9 364 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 METTL5Q9NRN9 209 aaKnown RBP5.16□□□□□ -1.58
RIF1-207ENST00000454583 ETNK2Q9NVF9 386 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 XPO7Q9UIA9 1087 aaKnown RBP5.16□□□□□ -1.58
RIF1-207ENST00000454583 PACSIN2Q9UNF0 486 aaPredicted RBP5.16□□□□□ -1.58
RIF1-207ENST00000454583 C2orf78A6NCI8 922 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 GRXCR2A6NFK2 248 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 MED7O43513 233 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 HSF2BPO75031 334 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 HNRNPA1P09651 372 aaKnown RBP eCLIP5.16□□□□□ -1.58
RIF1-207ENST00000454583 CD58P19256 250 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 BDNFP23560 247 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 KDELR1P24390 212 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 MIPP30301 263 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 HTR7P34969 479 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 NOS2P35228 1153 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 NOP2P46087 812 aaKnown RBP5.16□□□□□ -1.58
RIF1-207ENST00000454583 PPP3CCP48454 512 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 CARSP49589 748 aaKnown RBP5.16□□□□□ -1.58
RIF1-207ENST00000454583 COPS2P61201 443 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 ZNF33AQ06730 810 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 CKAP4Q07065 602 aaKnown RBP5.16□□□□□ -1.58
RIF1-207ENST00000454583 PTPROQ16827 1216 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 FAM171A1Q5VUB5 890 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 TMEM215Q68D42 235 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 ANKRD54Q6NXT1 300 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 LRIG3Q6UXM1 1119 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 TMC3Q7Z5M5 1100 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 GPR149Q86SP6 731 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 KRT222Q8N1A0 295 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 NUP93Q8N1F7 819 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 AUTS2Q8WXX7 1259 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 TRIB3Q96RU7 358 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 INSM2Q96T92 566 aaPredicted RBP5.16□□□□□ -1.58
RIF1-207ENST00000454583 FAM129AQ9BZQ8 928 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 FAM49BQ9NUQ9 324 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 OBP2AQ9NY56 170 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 PUF60Q9UHX1 559 aaKnown RBP5.16□□□□□ -1.58
RIF1-207ENST00000454583 ATP8A1Q9Y2Q0 1164 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 HS3ST4Q9Y661 456 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 NUP210LQ5VU65 1888 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 CFAP54Q96N23 3096 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 A0A1W2PQH9 124 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 CTAGE15A4D2H0 777 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 C5orf60A6NFR6 353 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 A8MXQ7 604 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 E7ESA3 106 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 STC2O76061 302 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 ZBED1O96006 694 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 CTAGE8P0CG41 777 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 EPCAMP16422 314 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 HOXD9P28356 352 aaPredicted RBP5.16□□□□□ -1.58
RIF1-207ENST00000454583 CD68P34810 354 aaPredicted RBP5.16□□□□□ -1.58
RIF1-207ENST00000454583 MLLT3P42568 568 aaPredicted RBP5.16□□□□□ -1.58
RIF1-207ENST00000454583 MAP3K7CLP57077 242 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 GALNT2Q10471 571 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 SMC1AQ14683 1233 aaKnown RBP5.16□□□□□ -1.58
RIF1-207ENST00000454583 MAPRE1Q15691 268 aaKnown RBP5.16□□□□□ -1.58
RIF1-207ENST00000454583 PAN2Q504Q3 1202 aaKnown RBP5.16□□□□□ -1.58
RIF1-207ENST00000454583 MS4A13Q5J8X5 152 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 STXBP5Q5T5C0 1151 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 CTAGE6Q86UF2 777 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 CTAGE4Q8IX94 777 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 PGBD5Q8N414 524 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 TRIM11Q96F44 468 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 TNIP3Q96KP6 325 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 FAM83CQ9BQN1 747 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 ZNF670Q9BS34 389 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 APOL6Q9BWW8 343 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 SLC46A2Q9BY10 475 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 ULBP1Q9BZM6 244 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 TMEM51Q9NW97 253 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 TMEM248Q9NWD8 314 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 CWC15Q9P013 229 aaKnown RBP5.16□□□□□ -1.58
RIF1-207ENST00000454583 STRIP2Q9ULQ0 834 aa5.16□□□□□ -1.58
RIF1-207ENST00000454583 CLUHO75153 1309 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 CACNA1IQ9P0X4 2223 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 MACROD2A1Z1Q3 448 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 PRR19A6NJB7 356 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 H7C4K7 107 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 THAP12O43422 761 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 BUB1O43683 1085 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 HUS1O60921 280 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 FTCDO95954 541 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 PDGFRBP09619 1106 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 RARAP10276 462 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 PECAM1P16284 738 aaPredicted RBP5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms