RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 HSPH1Q92598 858 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 ZSWIM3Q96MP5 696 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 ATXN3LQ9H3M9 355 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 TRPC7Q9HCX4 862 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 ASAH2Q9NR71 780 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 ZDHHC7Q9NXF8 308 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 FZD10Q9ULW2 581 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 NR2E1Q9Y466 385 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 SLC12A8A0AV02 714 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 CCDC66A2RUB6 948 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 PSTPIP1O43586 416 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 PAPLNO95428 1278 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 RALAP11233 206 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 KRT10P13645 584 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 IGFBP4P22692 258 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 KDELR1P24390 212 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 IL4RP24394 825 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 L1CAMP32004 1257 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 ADRA1BP35368 520 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 CBX2Q14781 532 aaPredicted RBP11.41□□□□□ -0.58
SCN9A-205ENST00000454569 TEAD2Q15562 447 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 HECTD3Q5T447 861 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 TMEM184AQ6ZMB5 413 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 KATNAL2Q8IYT4 538 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 ZNF276Q8N554 614 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 CMASQ8NFW8 434 aaPredicted RBP11.41□□□□□ -0.58
SCN9A-205ENST00000454569 ING5Q8WYH8 240 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 SMG7Q92540 1137 aaKnown RBP11.41□□□□□ -0.58
SCN9A-205ENST00000454569 MYEOVQ96EZ4 313 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 KCTD15Q96SI1 283 aaPredicted RBP11.41□□□□□ -0.58
SCN9A-205ENST00000454569 KLF16Q9BXK1 252 aaPredicted RBP11.41□□□□□ -0.58
SCN9A-205ENST00000454569 TKTL2Q9H0I9 626 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 SMPD4Q9NXE4 827 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 MARCH2Q9P0N8 246 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 UXTQ9UBK9 157 aaPredicted RBP11.41□□□□□ -0.58
SCN9A-205ENST00000454569 SAR1BQ9Y6B6 198 aa11.41□□□□□ -0.58
SCN9A-205ENST00000454569 KIF26AQ9ULI4 1882 aaPredicted RBP11.41□□□□□ -0.58
SCN9A-205ENST00000454569 GOLGA6L7A0A1B0GV03 622 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 KCNU1A8MYU2 1149 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 MIF4GDA9UHW6 222 aaKnown RBP11.4□□□□□ -0.58
SCN9A-205ENST00000454569 PRPSAP2O60256 369 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 CEP104O60308 925 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 OLFM2O95897 454 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 IGLV3-27P01718 113 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 KLKB1P03952 638 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 KRT1P04264 644 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 PRLRP16471 622 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 CEBPBP17676 345 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 POU3F3P20264 500 aaPredicted RBP11.4□□□□□ -0.58
SCN9A-205ENST00000454569 ATP5C1P36542 298 aaKnown RBP11.4□□□□□ -0.58
SCN9A-205ENST00000454569 RWDD2BP57060 319 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 TBX4P57082 545 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 CTC1Q2NKJ3 1217 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 ERMARDQ5T6L9 678 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 LRRC38Q5VT99 294 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 ANKRD54Q6NXT1 300 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 ADAT2Q7Z6V5 191 aaKnown RBP11.4□□□□□ -0.58
SCN9A-205ENST00000454569 C14orf80Q86SX3 495 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 ELMOD1Q8N336 334 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 MICALL1Q8N3F8 863 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 CDCA3Q99618 268 aaPredicted RBP11.4□□□□□ -0.58
SCN9A-205ENST00000454569 HEMGNQ9BXL5 484 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 S1PR5Q9H228 398 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 DHX35Q9H5Z1 703 aaKnown RBP11.4□□□□□ -0.58
SCN9A-205ENST00000454569 WDCPQ9H6R7 721 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 PCDH18Q9HCL0 1135 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.4□□□□□ -0.58
SCN9A-205ENST00000454569 ARHGEF38Q9NXL2 777 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 RRN3Q9NYV6 651 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 LMCD1Q9NZU5 365 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 CCL26Q9Y258 94 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 TLR6Q9Y2C9 796 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 MFHAS1Q9Y4C4 1052 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 MRFAP1Q9Y605 127 aa11.4□□□□□ -0.58
SCN9A-205ENST00000454569 MYO10Q9HD67 2058 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 TMEM265A0A087WTH1 108 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.39□□□□□ -0.59
SCN9A-205ENST00000454569 LRRD1A4D1F6 860 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 GREM1O60565 184 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 STC2O76061 302 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 MOCS2O96007 188 aaPredicted RBP11.39□□□□□ -0.59
SCN9A-205ENST00000454569 IRF1P10914 325 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 HDCP19113 662 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 CDKN2BP42772 138 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 IRAK1P51617 712 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 CDH6P55285 790 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 DPYSL3Q14195 570 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 TRIP4Q15650 581 aaPredicted RBP11.39□□□□□ -0.59
SCN9A-205ENST00000454569 HADHQ16836 314 aaKnown RBP11.39□□□□□ -0.59
SCN9A-205ENST00000454569 PABPC1LQ4VXU2 614 aaKnown RBP11.39□□□□□ -0.59
SCN9A-205ENST00000454569 FAM182AQ5T1J6 154 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 GPR158Q5T848 1215 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 PIK3R6Q5UE93 754 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 NADSYN1Q6IA69 706 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 SPOCD1Q6ZMY3 1216 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 PDZD4Q76G19 769 aaPredicted RBP11.39□□□□□ -0.59
SCN9A-205ENST00000454569 RTL10Q7L3V2 364 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 POLNQ7Z5Q5 900 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 RASGEF1CQ8N431 466 aa11.39□□□□□ -0.59
SCN9A-205ENST00000454569 UBL4BQ8N7F7 174 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms