RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 FAM228BP0C875 321 aa29.08■■■□□ 2.25
SMARCC1-203ENST00000454240 EIF2DP41214 584 aaKnown RBP29.08■■■□□ 2.25
SMARCC1-203ENST00000454240 SLC11A2P49281 568 aa29.08■■■□□ 2.25
SMARCC1-203ENST00000454240 SULT1E1P49888 294 aa29.08■■■□□ 2.25
SMARCC1-203ENST00000454240 VCPP55072 806 aaKnown RBP29.08■■■□□ 2.25
SMARCC1-203ENST00000454240 ANO4Q32M45 955 aa29.08■■■□□ 2.25
SMARCC1-203ENST00000454240 PPP1R15BQ5SWA1 713 aa29.08■■■□□ 2.25
SMARCC1-203ENST00000454240 CD101Q93033 1021 aa29.08■■■□□ 2.25
SMARCC1-203ENST00000454240 CLDN23Q96B33 292 aa29.08■■■□□ 2.25
SMARCC1-203ENST00000454240 P2RY11Q96G91 374 aa29.08■■■□□ 2.25
SMARCC1-203ENST00000454240 TBCBQ99426 244 aa29.08■■■□□ 2.25
SMARCC1-203ENST00000454240 BBS2Q9BXC9 721 aa29.08■■■□□ 2.25
SMARCC1-203ENST00000454240 TMEM51Q9NW97 253 aa29.08■■■□□ 2.25
SMARCC1-203ENST00000454240 ZNHIT6Q9NWK9 470 aaKnown RBP29.08■■■□□ 2.25
SMARCC1-203ENST00000454240 DLGAP2Q9P1A6 1054 aa29.08■■■□□ 2.25
SMARCC1-203ENST00000454240 SYNJ2BP-COX16A0A087WUM0 186 aa29.07■■■□□ 2.24
SMARCC1-203ENST00000454240 C2CD4BA6NLJ0 364 aa29.07■■■□□ 2.24
SMARCC1-203ENST00000454240 KCNU1A8MYU2 1149 aa29.07■■■□□ 2.24
SMARCC1-203ENST00000454240 NCAM2O15394 837 aa29.07■■■□□ 2.24
SMARCC1-203ENST00000454240 SLC2A3P11169 496 aa29.07■■■□□ 2.24
SMARCC1-203ENST00000454240 CHRNB1P11230 501 aa29.07■■■□□ 2.24
SMARCC1-203ENST00000454240 CCR1P32246 355 aa29.07■■■□□ 2.24
SMARCC1-203ENST00000454240 RFC1P35251 1148 aaPredicted RBP29.07■■■□□ 2.24
SMARCC1-203ENST00000454240 NME3Q13232 169 aa29.07■■■□□ 2.24
SMARCC1-203ENST00000454240 MAPK8IP2Q13387 824 aaPredicted RBP29.07■■■□□ 2.24
SMARCC1-203ENST00000454240 PPP2R5DQ14738 602 aa29.07■■■□□ 2.24
SMARCC1-203ENST00000454240 DNAJC24Q6P3W2 148 aa29.07■■■□□ 2.24
SMARCC1-203ENST00000454240 C12orf40Q86WS4 652 aa29.07■■■□□ 2.24
SMARCC1-203ENST00000454240 ETFBKMTQ8IXQ9 262 aa29.07■■■□□ 2.24
SMARCC1-203ENST00000454240 RXFP2Q8WXD0 754 aa29.07■■■□□ 2.24
SMARCC1-203ENST00000454240 EXOC4Q96A65 974 aa29.07■■■□□ 2.24
SMARCC1-203ENST00000454240 CFAP57Q96MR6 1250 aa29.07■■■□□ 2.24
SMARCC1-203ENST00000454240 PIGVQ9NUD9 493 aa29.07■■■□□ 2.24
SMARCC1-203ENST00000454240 COX16Q9P0S2 106 aa29.07■■■□□ 2.24
SMARCC1-203ENST00000454240 ZNF318Q5VUA4 2279 aa29.06■■■□□ 2.24
SMARCC1-203ENST00000454240 SSU72P8A0A1W2PR75 194 aa29.06■■■□□ 2.24
SMARCC1-203ENST00000454240 NEDD8-MDP1E9PL57 170 aa29.06■■■□□ 2.24
SMARCC1-203ENST00000454240 F9P00740 461 aa29.06■■■□□ 2.24
SMARCC1-203ENST00000454240 PENKP01210 267 aaPredicted RBP29.06■■■□□ 2.24
SMARCC1-203ENST00000454240 APOEP02649 317 aa29.06■■■□□ 2.24
SMARCC1-203ENST00000454240 DCNP07585 359 aaKnown RBP29.06■■■□□ 2.24
SMARCC1-203ENST00000454240 TYRP14679 529 aa29.06■■■□□ 2.24
SMARCC1-203ENST00000454240 EIF4A3P38919 411 aaKnown RBP29.06■■■□□ 2.24
SMARCC1-203ENST00000454240 SLC6A11P48066 632 aa29.06■■■□□ 2.24
SMARCC1-203ENST00000454240 ASTE1Q2TB18 679 aaPredicted RBP29.06■■■□□ 2.24
SMARCC1-203ENST00000454240 FAM133BQ5BKY9 247 aaKnown RBP29.06■■■□□ 2.24
SMARCC1-203ENST00000454240 FYB2Q5VWT5 728 aa29.06■■■□□ 2.24
SMARCC1-203ENST00000454240 NADSYN1Q6IA69 706 aa29.06■■■□□ 2.24
SMARCC1-203ENST00000454240 PLEKHA7Q6IQ23 1121 aa29.06■■■□□ 2.24
SMARCC1-203ENST00000454240 FSTL4Q6MZW2 842 aa29.06■■■□□ 2.24
SMARCC1-203ENST00000454240 TC2NQ8N9U0 490 aa29.06■■■□□ 2.24
SMARCC1-203ENST00000454240 BTN2A3PQ96KV6 586 aa29.06■■■□□ 2.24
SMARCC1-203ENST00000454240 NENFQ9UMX5 172 aa29.06■■■□□ 2.24
SMARCC1-203ENST00000454240 ENDOD1O94919 500 aa29.05■■■□□ 2.24
SMARCC1-203ENST00000454240 PDGFRAP16234 1089 aa29.05■■■□□ 2.24
SMARCC1-203ENST00000454240 CXCR3P49682 368 aa29.05■■■□□ 2.24
SMARCC1-203ENST00000454240 DEUP1Q05D60 604 aa29.05■■■□□ 2.24
SMARCC1-203ENST00000454240 GRSF1Q12849 480 aaKnown RBP eCLIP29.05■■■□□ 2.243e-7■■■□□ 16.2
SMARCC1-203ENST00000454240 CCINQ13939 588 aa29.05■■■□□ 2.24
SMARCC1-203ENST00000454240 CCDC14Q49A88 953 aa29.05■■■□□ 2.24
SMARCC1-203ENST00000454240 NAT16Q8N8M0 369 aa29.05■■■□□ 2.24
SMARCC1-203ENST00000454240 ATP6V0D2Q8N8Y2 350 aa29.05■■■□□ 2.24
SMARCC1-203ENST00000454240 CHP1Q99653 195 aa29.05■■■□□ 2.24
SMARCC1-203ENST00000454240 IRX2Q9BZI1 471 aaPredicted RBP29.05■■■□□ 2.24
SMARCC1-203ENST00000454240 LMAN1LQ9HAT1 526 aa29.05■■■□□ 2.24
SMARCC1-203ENST00000454240 XPO7Q9UIA9 1087 aaKnown RBP29.05■■■□□ 2.24
SMARCC1-203ENST00000454240 GOLGA6L7A0A1B0GV03 622 aa29.04■■■□□ 2.24
SMARCC1-203ENST00000454240 CACNG3O60359 315 aa29.04■■■□□ 2.24
SMARCC1-203ENST00000454240 MOCS2O96007 188 aaPredicted RBP29.04■■■□□ 2.24
SMARCC1-203ENST00000454240 DRD1P21728 446 aa29.04■■■□□ 2.24
SMARCC1-203ENST00000454240 SLC6A4P31645 630 aa29.04■■■□□ 2.24
SMARCC1-203ENST00000454240 PTPN9P43378 593 aa29.04■■■□□ 2.24
SMARCC1-203ENST00000454240 RPS9P46781 194 aaKnown RBP29.04■■■□□ 2.24
SMARCC1-203ENST00000454240 MAMLD1Q13495 774 aa29.04■■■□□ 2.24
SMARCC1-203ENST00000454240 DGKKQ5KSL6 1271 aa29.04■■■□□ 2.24
SMARCC1-203ENST00000454240 ALKBH5Q6P6C2 394 aaKnown RBP29.04■■■□□ 2.24
SMARCC1-203ENST00000454240 RNF34Q969K3 372 aa29.04■■■□□ 2.24
SMARCC1-203ENST00000454240 TRIM11Q96F44 468 aa29.04■■■□□ 2.24
SMARCC1-203ENST00000454240 DDX50Q9BQ39 737 aaKnown RBP29.04■■■□□ 2.24
SMARCC1-203ENST00000454240 PARVAQ9NVD7 372 aa29.04■■■□□ 2.24
SMARCC1-203ENST00000454240 SLC12A6Q9UHW9 1150 aa29.04■■■□□ 2.24
SMARCC1-203ENST00000454240 TULP3O75386 442 aa29.03■■■□□ 2.24
SMARCC1-203ENST00000454240 CYBBP04839 570 aa29.03■■■□□ 2.24
SMARCC1-203ENST00000454240 ABCB4P21439 1286 aa29.03■■■□□ 2.24
SMARCC1-203ENST00000454240 SDC4P31431 198 aa29.03■■■□□ 2.24
SMARCC1-203ENST00000454240 RPL7AP62424 266 aaKnown RBP29.03■■■□□ 2.24
SMARCC1-203ENST00000454240 MPPE1Q53F39 396 aa29.03■■■□□ 2.24
SMARCC1-203ENST00000454240 BRMS1LQ5PSV4 323 aa29.03■■■□□ 2.24
SMARCC1-203ENST00000454240 PIK3R6Q5UE93 754 aa29.03■■■□□ 2.24
SMARCC1-203ENST00000454240 PHTF2Q8N3S3 785 aa29.03■■■□□ 2.24
SMARCC1-203ENST00000454240 CENPIQ92674 756 aaPredicted RBP29.03■■■□□ 2.24
SMARCC1-203ENST00000454240 XPO6Q96QU8 1125 aaKnown RBP29.03■■■□□ 2.24
SMARCC1-203ENST00000454240 PNKPQ96T60 521 aa29.03■■■□□ 2.24
SMARCC1-203ENST00000454240 WDCPQ9H6R7 721 aa29.03■■■□□ 2.24
SMARCC1-203ENST00000454240 ARHGEF38Q9NXL2 777 aa29.03■■■□□ 2.24
SMARCC1-203ENST00000454240 PLK2Q9NYY3 685 aa29.03■■■□□ 2.24
SMARCC1-203ENST00000454240 CNOT8Q9UFF9 292 aaKnown RBP29.03■■■□□ 2.24
SMARCC1-203ENST00000454240 FBXO10Q9UK96 956 aa29.03■■■□□ 2.24
SMARCC1-203ENST00000454240 ATG2BQ96BY7 2078 aa29.02■■■□□ 2.24
SMARCC1-203ENST00000454240 A0A0A0MRY4 1105 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms