RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 CEP70Q8NHQ1 597 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 CACTINQ8WUQ7 758 aaKnown RBP4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 HMGB4Q8WW32 186 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 ASB10Q8WXI3 467 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 NPIPB3Q92617 1050 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 GOLGA1Q92805 767 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 R3HDM4Q96D70 268 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 KTI12Q96EK9 354 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 CDK5RAP1Q96SZ6 601 aaKnown RBP4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 SLC26A6Q9BXS9 759 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 CCDC134Q9H6E4 229 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 CHODLQ9H9P2 273 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 NOD2Q9HC29 1040 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 TBC1D22BQ9NU19 505 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 EHD3Q9NZN3 535 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 DNAJC16Q9Y2G8 782 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 UBE2J1Q9Y385 318 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 AFG3L2Q9Y4W6 797 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 PCDHB7Q9Y5E2 793 aa4.23□□□□□ -1.73
HMGB1P15-201ENST00000453854 MBD3L5A6NJ08 208 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 SAC3D1A6NKF1 404 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 B4E171 279 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 MPPED1O15442 326 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 NKX2-8O15522 239 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 KRT38O76015 456 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 BAIAP3O94812 1187 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 MBD4O95243 580 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 DDX58O95786 925 aaKnown RBP4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 CD4P01730 458 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 PTMAP06454 111 aaKnown RBP4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 CYP3A4P08684 503 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 TACR2P21452 398 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 MMP8P22894 467 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 ADRA1DP25100 572 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 FOLR3P41439 243 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 TSPAN7P41732 249 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 CLCN2P51788 898 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 FAM3BP58499 235 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 RPL15P61313 204 aaKnown RBP4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 RBM6P78332 1123 aaKnown RBP4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 EIF2B5Q13144 721 aaKnown RBP4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 SEMA3BQ13214 749 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 SLC12A1Q13621 1099 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 BMPR2Q13873 1038 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 ANKRD1Q15327 319 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 NBPF8Q3BBV2 869 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 CTXN3Q4LDR2 81 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 MTHFD1LQ6UB35 978 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 USP51Q70EK9 711 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 SYT13Q7L8C5 426 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 HEATR4Q86WZ0 1026 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 PALM2Q8IXS6 379 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 OR8H2Q8N162 312 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 NKAIN3Q8N8D7 197 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 PNPLA1Q8N8W4 532 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 RP9Q8TA86 221 aaKnown RBP4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 HDAC2Q92769 488 aaKnown RBP4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 ZBTB10Q96DT7 871 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 REXO5Q96IC2 774 aaKnown RBP4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 PBKQ96KB5 322 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 PRR25Q96S07 402 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 NPAS1Q99742 590 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 REEP2Q9BRK0 252 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 ZNF747Q9BV97 191 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 ALDH8A1Q9H2A2 487 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 SERHL2Q9H4I8 314 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 RETREG1Q9H6L5 497 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 JMJD4Q9H9V9 463 aa4.22□□□□□ -1.73
HMGB1P15-201ENST00000453854 CCDC187A0A096LP49 1063 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 VWA3AA6NCI4 1184 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 A6NCN8 305 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 M0QYT0 321 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 TMPRSS11DO60235 418 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 TSPAN3O60637 253 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 TMCC2O75069 709 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 HEXIM1O94992 359 aaKnown RBP4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 NXPH3O95157 252 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 C1SP09871 688 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 ITGAMP11215 1152 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 CREB1P16220 341 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 CAPN3P20807 821 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 RPS6KB1P23443 525 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 YY1P25490 414 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 ITPKBP27987 946 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 CTGFP29279 349 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 THBS4P35443 961 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 ACVRL1P37023 503 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 RBM5P52756 815 aaKnown RBP eCLIP4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 FOXL2P58012 376 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 BLOC1S1P78537 153 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 DEUP1Q05D60 604 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 TAF11Q15544 211 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 TXNRD1Q16881 649 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 FAM187BQ17R55 369 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 P3H1Q32P28 736 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 ZNF569Q5MCW4 686 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 SPDYAQ5MJ70 313 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 C1QTNF12Q5T7M4 302 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 ACSM6Q6P461 480 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms