RNA–Protein interactions for RNA: ENST00000453527.6

CTSB-204, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTSB, Length 2,011 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-204ENST00000453527 PRG3Q9Y2Y8 225 aaPredicted RBP18.37■□□□□ 0.53
CTSB-204ENST00000453527 PCDHB7Q9Y5E2 793 aa18.37■□□□□ 0.53
CTSB-204ENST00000453527 FAM72CH0Y354 149 aa18.36■□□□□ 0.53
CTSB-204ENST00000453527 TNFRSF10BO14763 440 aa18.36■□□□□ 0.53
CTSB-204ENST00000453527 FAM107AO95990 144 aa18.36■□□□□ 0.53
CTSB-204ENST00000453527 AMHP03971 560 aa18.36■□□□□ 0.53
CTSB-204ENST00000453527 OR4Q2P0C623 313 aa18.36■□□□□ 0.53
CTSB-204ENST00000453527 GRIK1P39086 918 aa18.36■□□□□ 0.53
CTSB-204ENST00000453527 RASA2Q15283 850 aa18.36■□□□□ 0.53
CTSB-204ENST00000453527 SYCP2LQ5T4T6 812 aa18.36■□□□□ 0.53
CTSB-204ENST00000453527 FAM72AQ5TYM5 149 aa18.36■□□□□ 0.53
CTSB-204ENST00000453527 FAM72DQ6L9T8 149 aa18.36■□□□□ 0.53
CTSB-204ENST00000453527 FAM72BQ86X60 149 aa18.36■□□□□ 0.53
CTSB-204ENST00000453527 XPO6Q96QU8 1125 aaKnown RBP18.36■□□□□ 0.53
CTSB-204ENST00000453527 CCT8L2Q96SF2 557 aa18.36■□□□□ 0.53
CTSB-204ENST00000453527 ZCWPW1Q9H0M4 648 aa18.36■□□□□ 0.53
CTSB-204ENST00000453527 FETUBQ9UGM5 382 aa18.36■□□□□ 0.53
CTSB-204ENST00000453527 SLC24A2Q9UI40 661 aa18.36■□□□□ 0.53
CTSB-204ENST00000453527 PRDM4Q9UKN5 801 aa18.36■□□□□ 0.53
CTSB-204ENST00000453527 TEX264Q9Y6I9 313 aa18.36■□□□□ 0.53
CTSB-204ENST00000453527 POC1B-GALNT4F8VUJ3 575 aa18.35■□□□□ 0.53
CTSB-204ENST00000453527 PITPNM1O00562 1244 aa18.35■□□□□ 0.53
CTSB-204ENST00000453527 DCLK1O15075 740 aa18.35■□□□□ 0.53
CTSB-204ENST00000453527 TADA2AO75478 443 aa18.35■□□□□ 0.53
CTSB-204ENST00000453527 METTL18O95568 372 aa18.35■□□□□ 0.53
CTSB-204ENST00000453527 APRTP07741 180 aa18.35■□□□□ 0.53
CTSB-204ENST00000453527 CREB1P16220 341 aa18.35■□□□□ 0.53
CTSB-204ENST00000453527 MTM1Q13496 603 aa18.35■□□□□ 0.53
CTSB-204ENST00000453527 SLC39A12Q504Y0 691 aa18.35■□□□□ 0.53
CTSB-204ENST00000453527 FAXCQ5TGI0 409 aa18.35■□□□□ 0.53
CTSB-204ENST00000453527 FAM43BQ6ZT52 329 aaPredicted RBP18.35■□□□□ 0.53
CTSB-204ENST00000453527 DCP1BQ8IZD4 617 aaKnown RBP18.35■□□□□ 0.53
CTSB-204ENST00000453527 ABI1Q8IZP0 508 aa18.35■□□□□ 0.53
CTSB-204ENST00000453527 VPS52Q8N1B4 723 aa18.35■□□□□ 0.53
CTSB-204ENST00000453527 ATXN2LQ8WWM7 1075 aaKnown RBP18.35■□□□□ 0.53
CTSB-204ENST00000453527 LGMNQ99538 433 aa18.35■□□□□ 0.53
CTSB-204ENST00000453527 INTS9Q9NV88 658 aaKnown RBP18.35■□□□□ 0.53
CTSB-204ENST00000453527 ACTL7BQ9Y614 415 aa18.35■□□□□ 0.53
CTSB-204ENST00000453527 FOXO6A8MYZ6 492 aa18.35■□□□□ 0.53
CTSB-204ENST00000453527 SYN3O14994 580 aa18.35■□□□□ 0.53
CTSB-204ENST00000453527 VAV1P15498 845 aa18.35■□□□□ 0.53
CTSB-204ENST00000453527 ELK3P41970 407 aa18.35■□□□□ 0.53
CTSB-204ENST00000453527 CCT5P48643 541 aa18.35■□□□□ 0.53
CTSB-204ENST00000453527 SLC5A3P53794 718 aa18.35■□□□□ 0.53
CTSB-204ENST00000453527 HTRA3P83110 453 aa18.35■□□□□ 0.53
CTSB-204ENST00000453527 NR1H3Q13133 447 aa18.35■□□□□ 0.53
CTSB-204ENST00000453527 PDK1Q15118 436 aa18.35■□□□□ 0.53
CTSB-204ENST00000453527 PRKD1Q15139 912 aaPredicted RBP18.35■□□□□ 0.53
CTSB-204ENST00000453527 TAC4Q86UU9 113 aa18.35■□□□□ 0.53
CTSB-204ENST00000453527 IGDCC3Q8IVU1 814 aa18.35■□□□□ 0.53
CTSB-204ENST00000453527 TKTL2Q9H0I9 626 aa18.35■□□□□ 0.53
CTSB-204ENST00000453527 ACSS3Q9H6R3 686 aa18.35■□□□□ 0.53
CTSB-204ENST00000453527 VWA8A3KMH1 1905 aa18.35■□□□□ 0.53
CTSB-204ENST00000453527 AVILO75366 819 aa18.34■□□□□ 0.53
CTSB-204ENST00000453527 ATP2A2P16615 1042 aaKnown RBP18.34■□□□□ 0.53
CTSB-204ENST00000453527 ERCC2P18074 760 aa18.34■□□□□ 0.53
CTSB-204ENST00000453527 GLUD2P49448 558 aa18.34■□□□□ 0.53
CTSB-204ENST00000453527 ZNF135P52742 658 aaPredicted RBP18.34■□□□□ 0.53
CTSB-204ENST00000453527 GEMIN4P57678 1058 aaKnown RBP18.34■□□□□ 0.53
CTSB-204ENST00000453527 TMED2Q15363 201 aa18.34■□□□□ 0.53
CTSB-204ENST00000453527 VSTM1Q6UX27 236 aa18.34■□□□□ 0.53
CTSB-204ENST00000453527 MCUQ8NE86 351 aa18.34■□□□□ 0.53
CTSB-204ENST00000453527 DQX1Q8TE96 717 aaKnown RBP18.34■□□□□ 0.53
CTSB-204ENST00000453527 SEPT8Q92599 483 aa18.34■□□□□ 0.53
CTSB-204ENST00000453527 PAK6Q9NQU5 681 aaPredicted RBP18.34■□□□□ 0.53
CTSB-204ENST00000453527 RSPH14Q9UHP6 348 aa18.34■□□□□ 0.53
CTSB-204ENST00000453527 TET1Q8NFU7 2136 aa18.34■□□□□ 0.53
CTSB-204ENST00000453527 A0A0A0MRY4 1105 aa18.33■□□□□ 0.53
CTSB-204ENST00000453527 TMEM120BA0PK00 339 aa18.33■□□□□ 0.53
CTSB-204ENST00000453527 IGLV3-25P01717 112 aa18.33■□□□□ 0.53
CTSB-204ENST00000453527 BRAFP15056 766 aa18.33■□□□□ 0.53
CTSB-204ENST00000453527 TPSB2P20231 275 aa18.33■□□□□ 0.53
CTSB-204ENST00000453527 TPI1P60174 286 aa18.33■□□□□ 0.53
CTSB-204ENST00000453527 YWHAGP61981 247 aaKnown RBP eCLIP18.33■□□□□ 0.53
CTSB-204ENST00000453527 EIF4EBP2Q13542 120 aaPredicted RBP18.33■□□□□ 0.53
CTSB-204ENST00000453527 TPSAB1Q15661 275 aa18.33■□□□□ 0.53
CTSB-204ENST00000453527 NFE2Q16621 373 aaPredicted RBP18.33■□□□□ 0.53
CTSB-204ENST00000453527 ANKRD20A2Q5SQ80 823 aa18.33■□□□□ 0.53
CTSB-204ENST00000453527 VARS2Q5ST30 1063 aaKnown RBP18.33■□□□□ 0.53
CTSB-204ENST00000453527 ANKRD20A1Q5TYW2 823 aa18.33■□□□□ 0.53
CTSB-204ENST00000453527 ANKRD20A3Q5VUR7 823 aa18.33■□□□□ 0.53
CTSB-204ENST00000453527 ARHGEF18Q6ZSZ5 1173 aa18.33■□□□□ 0.53
CTSB-204ENST00000453527 CAND1Q86VP6 1230 aaKnown RBP18.33■□□□□ 0.53
CTSB-204ENST00000453527 FBF1Q8TES7 1133 aa18.33■□□□□ 0.53
CTSB-204ENST00000453527 ZNF473Q8WTR7 871 aaKnown RBP18.33■□□□□ 0.53
CTSB-204ENST00000453527 APBB2Q92870 758 aa18.33■□□□□ 0.53
CTSB-204ENST00000453527 FUBP3Q96I24 572 aaKnown RBP eCLIP18.33■□□□□ 0.53
CTSB-204ENST00000453527 SPATA13Q96N96 652 aa18.33■□□□□ 0.53
CTSB-204ENST00000453527 CASD1Q96PB1 797 aa18.33■□□□□ 0.53
CTSB-204ENST00000453527 ABCC13Q9NSE7 274 aa18.33■□□□□ 0.53
CTSB-204ENST00000453527 OR12D3Q9UGF7 316 aa18.33■□□□□ 0.53
CTSB-204ENST00000453527 CHMP2BQ9UQN3 213 aa18.33■□□□□ 0.53
CTSB-204ENST00000453527 RASA4BC9J798 803 aa18.33■□□□□ 0.52
CTSB-204ENST00000453527 PPP1R12AO14974 1030 aaPredicted RBP18.33■□□□□ 0.52
CTSB-204ENST00000453527 RASA4O43374 803 aa18.33■□□□□ 0.52
CTSB-204ENST00000453527 KLHL38Q2WGJ6 581 aa18.33■□□□□ 0.52
CTSB-204ENST00000453527 PDZD4Q76G19 769 aaPredicted RBP18.33■□□□□ 0.52
CTSB-204ENST00000453527 SRRM1Q8IYB3 904 aaKnown RBP18.33■□□□□ 0.52
CTSB-204ENST00000453527 AGGF1Q8N302 714 aaeCLIP18.33■□□□□ 0.52
CTSB-204ENST00000453527 P2RY11Q96G91 374 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms