RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 DCLK3Q9C098 648 aa9.25□□□□□ -0.93
DEPDC1B-202ENST00000453022 ZDHHC5Q9C0B5 715 aa9.25□□□□□ -0.93
DEPDC1B-202ENST00000453022 TMEM8AQ9HCN3 771 aa9.25□□□□□ -0.93
DEPDC1B-202ENST00000453022 CISHQ9NSE2 258 aa9.25□□□□□ -0.93
DEPDC1B-202ENST00000453022 ELOVL2Q9NXB9 296 aa9.25□□□□□ -0.93
DEPDC1B-202ENST00000453022 MARCH2Q9P0N8 246 aa9.25□□□□□ -0.93
DEPDC1B-202ENST00000453022 USP25Q9UHP3 1055 aa9.25□□□□□ -0.93
DEPDC1B-202ENST00000453022 PCOLCE2Q9UKZ9 415 aa9.25□□□□□ -0.93
DEPDC1B-202ENST00000453022 LHX6Q9UPM6 363 aa9.25□□□□□ -0.93
DEPDC1B-202ENST00000453022 GCN1Q92616 2671 aaKnown RBP9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 SLC12A8A0AV02 714 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 METTL12A8MUP2 240 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 PYGBP11216 843 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 KRT13P13646 458 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 HOXD9P28356 352 aaPredicted RBP9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 RDXP35241 583 aaKnown RBP9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 PSMC2P35998 433 aaKnown RBP9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 NDUFA8P51970 172 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 YWHAGP61981 247 aaKnown RBP eCLIP9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 SCAPQ12770 1279 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 EIF4HQ15056 248 aaKnown RBP9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 ARHGAP17Q68EM7 881 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 GLRX5Q86SX6 157 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 GUF1Q8N442 669 aaKnown RBP9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 BAHD1Q8TBE0 780 aaPredicted RBP9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 NDRG1Q92597 394 aaKnown RBP9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 PRCCQ92733 491 aaPredicted RBP9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 SIPA1Q96FS4 1042 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 EEF2KMTQ96G04 330 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 TMEM176AQ96HP8 235 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 HEXIM2Q96MH2 286 aaKnown RBP9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 CIPCQ9C0C6 399 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 MIR1-1HGQ9H1L0 117 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 FNDC3AQ9Y2H6 1198 aaKnown RBP9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 KNL1Q8NG31 2342 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 FAM237AA0A1B0GTK4 181 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 BCAT2O15382 392 aaPredicted RBP9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 SYNCRIPO60506 623 aaKnown RBP9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 EPHX1P07099 455 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 ZNF883P0CG24 379 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 HLA-EP13747 358 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 HLA-FP30511 346 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 MXI1P50539 228 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 TKTL1P51854 596 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 TRIP4Q15650 581 aaPredicted RBP9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 KRT39Q6A163 491 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 PM20D1Q6GTS8 502 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 SERPINA13PQ6UXR4 307 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 CCNI2Q6ZMN8 369 aaPredicted RBP9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 RSRC2Q7L4I2 434 aaKnown RBP9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 FAM124AQ86V42 546 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 ZC3H3Q8IXZ2 948 aaKnown RBP9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 ARHGAP18Q8N392 663 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 ZNF366Q8N895 744 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 CCDC150Q8NCX0 1101 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 DDI1Q8WTU0 396 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 UCMAQ8WVF2 138 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 TATDN2Q93075 761 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 PLD4Q96BZ4 506 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 SLC2A11Q9BYW1 496 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 ULBP1Q9BZM6 244 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 UBXN6Q9BZV1 441 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 TMEM245Q9H330 911 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 GAREM1Q9H706 876 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 TOR4AQ9NXH8 423 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 EIF2B4Q9UI10 523 aaKnown RBP9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 PCDHB9Q9Y5E1 797 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 CABIN1Q9Y6J0 2220 aa9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 COL5A1P20908 1838 aaPredicted RBP9.24□□□□□ -0.93
DEPDC1B-202ENST00000453022 FASNP49327 2511 aaKnown RBP9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 APC2O95996 2303 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 A0A1B0GVT2 93 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 TSPAN3O60637 253 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 CER1O95813 267 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 ZBED1O96006 694 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 CYBBP04839 570 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 HSP90AA1P07900 732 aaKnown RBP9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 C7P10643 843 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 OXTRP30559 389 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 GTF2H1P32780 548 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 ACSL1P33121 698 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 MATKP42679 507 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 SYKP43405 635 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 SGSHP51688 502 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 PDE4CQ08493 712 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 ADAM9Q13443 819 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 CAMK2GQ13555 558 aaPredicted RBP9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 GOLGA7BQ2TAP0 167 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 HLA-BQ31612 363 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 CBWD6Q4V339 395 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 CBWD3Q5JTY5 395 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 CBWD5Q5RIA9 395 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 FMNL3Q8IVF7 1028 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 HSCBQ8IWL3 235 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 SMYD4Q8IYR2 804 aaPredicted RBP9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 ANKRD52Q8NB46 1076 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 FBXL13Q8NEE6 735 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 OR2T3Q8NH03 318 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 CYB5D2Q8WUJ1 264 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 FAXDC2Q96IV6 333 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms