RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 C8orf37Q96NL8 207 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 LRRC37BQ96QE4 947 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 LMF1Q96S06 567 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 RPS6KC1Q96S38 1066 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 HAPLN3Q96S86 360 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 MXD3Q9BW11 206 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 TBC1D10AQ9BXI6 508 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 FGFBP2Q9BYJ0 223 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 TANGO6Q9C0B7 1094 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 GPR88Q9GZN0 384 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 PCED1AQ9H1Q7 454 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 MYLK2Q9H1R3 596 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 MEGF9Q9H1U4 602 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 LRRC19Q9H756 370 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 DCLRE1BQ9H816 532 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 ZWILCHQ9H900 591 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 SEC61A2Q9H9S3 476 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 METTL14Q9HCE5 456 aaKnown RBP4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 DMAP1Q9NPF5 467 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 SAR1AQ9NR31 198 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 STK32BQ9NY57 414 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 CTTNBP2NLQ9P2B4 639 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 ARPP21Q9UBL0 812 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 RASAL2Q9UJF2 1139 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 ZFP69BQ9UJL9 534 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 SNX24Q9Y343 169 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 NEU2Q9Y3R4 380 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 USH1CQ9Y6N9 552 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 NHSQ6T4R5 1651 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 SPATA31A5Q5VU36 1347 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 SPATA31A6Q5VVP1 1343 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 SPATA31A7Q8IWB4 1347 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 ADGRA3Q8IWK6 1321 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 IGSF9BQ9UPX0 1349 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 BAZ2BQ9UIF8 2168 aaKnown RBP4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 COL24A1Q17RW2 1714 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 A0A1B0GVG6 124 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 TLDC2A0PJX2 215 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 ANKRD62A6NC57 917 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 MAGEA13PA6NCF6 341 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 PDXKO00764 312 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 CETN3O15182 167 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 NVLO15381 856 aaKnown RBP4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 ZSCAN9O15535 394 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 PRPF4O43172 522 aaKnown RBP eCLIP4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 CCNT1O60563 726 aaKnown RBP4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 EDF1O60869 148 aaKnown RBP4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 SMIM24O75264 130 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 TJP3O95049 919 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 TTC4O95801 387 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 IL18BPO95998 194 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 PYGLP06737 847 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 ABHD2P08910 425 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 CYP2D6P10635 497 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 CYP19A1P11511 503 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 CETPP11597 493 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 CYP11B2P19099 503 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 PTPN4P29074 926 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 GNA11P29992 359 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 ATP5DP30049 168 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 HOXD13P35453 343 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 SOX5P35711 763 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 COILP38432 576 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 VHLP40337 213 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 MAGEA8P43361 318 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 IFNAR2P48551 515 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 PPARDQ03181 441 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 SPIRE1Q08AE8 756 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 KLF10Q13118 480 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 FOXE3Q13461 319 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 UBE4AQ14139 1066 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 KIF22Q14807 665 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 LETM2Q2VYF4 491 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 SLC45A4Q5BKX6 768 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 FAM47AQ5JRC9 791 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 C12orf60Q5U649 245 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 TMEM154Q6P9G4 183 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 PPP1R21Q6ZMI0 780 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 TSHZ1Q6ZSZ6 1077 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 DNAAF5Q86Y56 855 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 TDRPQ86YL5 185 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 RPUSD2Q8IZ73 545 aaKnown RBP4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 ARHGAP18Q8N392 663 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 RIBC1Q8N443 379 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 SLC43A3Q8NBI5 491 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 STKLD1Q8NE28 680 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 TTC8Q8TAM2 541 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 TBCKQ8TEA7 893 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 UCMAQ8WVF2 138 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 MAIP1Q8WWC4 291 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 NRG4Q8WWG1 115 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 HAS1Q92839 578 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 SLC35C1Q96A29 364 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 NSUN4Q96CB9 384 aaKnown RBP4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 C18orf8Q96DM3 657 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 ARHGEF26Q96DR7 871 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 MBOAT7Q96N66 472 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 NR1H4Q96RI1 486 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 NUDCD1Q96RS6 583 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms