RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 LCN1P1Q5VSP4 162 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 KLHDC7AQ5VTJ3 777 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 DARS2Q6PI48 645 aaKnown RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 RAPH1Q70E73 1250 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 PROSER1Q86XN7 944 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ANKMY2Q8IV38 441 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 CHERPQ8IWX8 916 aaKnown RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 ZCCHC9Q8N567 271 aaKnown RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 ATP6V0D2Q8N8Y2 350 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 VANGL1Q8TAA9 524 aaPredicted RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 CREB3L1Q96BA8 519 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 S100PBPQ96BU1 408 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 FAF2Q96CS3 445 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 FAM111AQ96PZ2 611 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ASB2Q96Q27 587 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ZSCAN10Q96SZ4 725 aaPredicted RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 DHRS9Q9BPW9 319 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 CCDC32Q9BV29 185 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 APOL6Q9BWW8 343 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 NUAK2Q9H093 628 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ZNF556Q9HAH1 456 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 KCNK13Q9HB14 408 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 SENP2Q9HC62 589 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 MAT2BQ9NZL9 334 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 MAPK8IP1Q9UQF2 711 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 AFG3L2Q9Y4W6 797 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 SNX13Q9Y5W8 968 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 MYH15Q9Y2K3 1946 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 FLT1P17948 1338 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 PIK3C2BO00750 1634 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 C3P01024 1663 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 LRRC10BA6NIK2 292 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 SFI1A8K8P3 1242 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 H7C0C1 242 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 PSMD12O00232 456 aaPredicted RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 TRDMT1O14717 391 aaKnown RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 MAGEB2O15479 319 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ORC5O43913 435 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 FAM20BO75063 409 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 UGT2B11O75310 529 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ENTPD5O75356 428 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 DHFRP00374 187 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 P4HBP07237 508 aaKnown RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 ENO3P13929 434 aaPredicted RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 POLR2CP19387 275 aaPredicted RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 CDC25CP30307 473 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ATP5OP48047 213 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 AP2S1P53680 142 aaPredicted RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 PLIN5Q00G26 463 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 GABPAQ06546 454 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 GALNT1Q10472 559 aaPredicted RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 RRP1BQ14684 758 aaKnown RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 SPCS2Q15005 226 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 MAPK11Q15759 364 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 INSCQ1MX18 579 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 NADK2Q4G0N4 442 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 TBCELQ5QJ74 424 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 PPM1LQ5SGD2 360 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 PPP2R2DQ66LE6 453 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ARHGAP17Q68EM7 881 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 OR52E8Q6IFG1 317 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ANKRD26P1Q6NSI1 321 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 GGT6Q6P531 493 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 C15orf52Q6ZUT6 534 aaKnown RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 FGD2Q7Z6J4 655 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 CLNKQ7Z7G1 428 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 SLC51BQ86UW2 128 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ITIH5Q86UX2 942 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 SLC13A5Q86YT5 568 aaPredicted RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 RASAL3Q86YV0 1011 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 PLCZ1Q86YW0 608 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 SMYD4Q8IYR2 804 aaPredicted RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 DEFB107AQ8IZN7 70 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 SLC7A5P1Q8MH63 180 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 EID3Q8N140 333 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 LARGE2Q8N3Y3 721 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 APPL2Q8NEU8 664 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 SETD6Q8TBK2 473 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 CHPT1Q8WUD6 406 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 RAD54LQ92698 747 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ARHGEF26Q96DR7 871 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 PTCD3Q96EY7 689 aaKnown RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 VPS35Q96QK1 796 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 CITED4Q96RK1 184 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 CHP1Q99653 195 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 LBHD1Q9BQE6 289 aaPredicted RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 SYT15Q9BQS2 421 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 CHCHD6Q9BRQ6 235 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 NUP85Q9BW27 656 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 ILKAPQ9H0C8 392 aaPredicted RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 OR51B5Q9H339 312 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 DENND2DQ9H6A0 471 aaPredicted RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 POLR1BQ9H9Y6 1135 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 NEK6Q9HC98 313 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 BIN3Q9NQY0 253 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.26□□□□□ -2.05
USP53-202ENST00000450251 TRPM5Q9NZQ8 1165 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 MED11Q9P086 117 aa2.26□□□□□ -2.05
USP53-202ENST00000450251 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.26□□□□□ -2.05
USP53-202ENST00000450251 UBQLN2Q9UHD9 624 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms