RNA–Protein interactions for RNA: ENST00000449581.1

LINC01428-201, Transcript of long intergenic non-protein coding RNA 1428, humanhuman

TSL 1 (best) BASIC

Gene LINC01428, Length 874 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01428-201ENST00000449581 SPATA16Q9BXB7 569 aa13.3□□□□□ -0.28
LINC01428-201ENST00000449581 PDZD7Q9H5P4 517 aa13.3□□□□□ -0.28
LINC01428-201ENST00000449581 PLEKHA5Q9HAU0 1116 aa13.3□□□□□ -0.28
LINC01428-201ENST00000449581 CNOT11Q9UKZ1 510 aaKnown RBP13.3□□□□□ -0.28
LINC01428-201ENST00000449581 RAB26Q9ULW5 256 aa13.3□□□□□ -0.28
LINC01428-201ENST00000449581 ANKRD6Q9Y2G4 727 aa13.3□□□□□ -0.28
LINC01428-201ENST00000449581 A0A0A0MRY4 1105 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 TCRBV7S3A2A0A539 114 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 NCAM2O15394 837 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 PLIN3O60664 434 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 SKAP2O75563 359 aaPredicted RBP13.29□□□□□ -0.28
LINC01428-201ENST00000449581 RAD17O75943 681 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 CALCAP01258 141 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 APRTP07741 180 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 THRAP10827 490 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 UBA1P22314 1058 aaKnown RBP13.29□□□□□ -0.28
LINC01428-201ENST00000449581 SPRP35270 261 aaPredicted RBP13.29□□□□□ -0.28
LINC01428-201ENST00000449581 CPOXP36551 454 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 ARL4AP40617 200 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 SLC1A6P48664 564 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 NUMBP49757 651 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 KPNA2P52292 529 aaKnown RBP13.29□□□□□ -0.28
LINC01428-201ENST00000449581 SOX10P56693 466 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 CDC42EP1Q00587 391 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 SLC6A3Q01959 620 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 NIPAL4Q0D2K0 466 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 ANKRD20A4Q4UJ75 823 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 INTS6LQ5JSJ4 861 aaKnown RBP13.29□□□□□ -0.28
LINC01428-201ENST00000449581 RABGAP1LQ5R372 815 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 HP1BP3Q5SSJ5 553 aaPredicted RBP13.29□□□□□ -0.28
LINC01428-201ENST00000449581 MBLAC2Q68D91 279 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 ARHGAP17Q68EM7 881 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 BORAQ6PGQ7 559 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 SLC26A9Q7LBE3 791 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 TMEM110Q86TL2 294 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 ICA1LQ8NDH6 482 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 JDP2Q8WYK2 163 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 TOP1MTQ969P6 601 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 SPATA13Q96N96 652 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 PANX3Q96QZ0 392 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 SGIP1Q9BQI5 828 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 GORASP1Q9BQQ3 440 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 SLC4A5Q9BY07 1137 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 SMARCAD1Q9H4L7 1026 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 PTTG2Q9NZH5 202 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 PSMD13Q9UNM6 376 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 PCDHB12Q9Y5F1 795 aa13.29□□□□□ -0.28
LINC01428-201ENST00000449581 ARHGAP10A1A4S6 786 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 TTLL13PA6NNM8 815 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 DENRO43583 198 aaKnown RBP13.28□□□□□ -0.28
LINC01428-201ENST00000449581 TIMM44O43615 452 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 SLC25A27O95847 323 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 POLBP06746 335 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 HARSP12081 509 aaKnown RBP13.28□□□□□ -0.28
LINC01428-201ENST00000449581 COL6A2P12110 1019 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 PTPRAP18433 802 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 MAGEA12P43365 314 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 RFTN1Q14699 578 aaPredicted RBP13.28□□□□□ -0.28
LINC01428-201ENST00000449581 TMEM132BQ14DG7 1078 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 PDK1Q15118 436 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 TMEM132AQ24JP5 1023 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 DCAF4L1Q3SXM0 396 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 FASTKD1Q53R41 847 aaKnown RBP13.28□□□□□ -0.28
LINC01428-201ENST00000449581 CFAP157Q5JU67 520 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 KCNT1Q5JUK3 1230 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 ZBTB41Q5SVQ8 909 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 OR6B2Q6IFH4 312 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 LBX2Q6XYB7 198 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 ALYREFQ86V81 257 aaKnown RBP13.28□□□□□ -0.28
LINC01428-201ENST00000449581 TREML1Q86YW5 311 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 IGDCC3Q8IVU1 814 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 UNC5BQ8IZJ1 945 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 MARVELD2Q8N4S9 558 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 LRRC52Q8N7C0 313 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 RNF149Q8NC42 400 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 ADCY4Q8NFM4 1077 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 GABPB2Q8TAK5 448 aaPredicted RBP13.28□□□□□ -0.28
LINC01428-201ENST00000449581 TFB1MQ8WVM0 346 aaKnown RBP13.28□□□□□ -0.28
LINC01428-201ENST00000449581 TSNARE1Q96NA8 513 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 KLF6Q99612 283 aaPredicted RBP13.28□□□□□ -0.28
LINC01428-201ENST00000449581 CDT1Q9H211 546 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 PCMTD2Q9NV79 361 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 IGSF9Q9P2J2 1179 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 PCSK1NQ9UHG2 260 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 LCTP09848 1927 aa13.28□□□□□ -0.28
LINC01428-201ENST00000449581 A0A088AWK7 358 aa13.27□□□□□ -0.29
LINC01428-201ENST00000449581 FAM170AA1A519 330 aa13.27□□□□□ -0.29
LINC01428-201ENST00000449581 ARHGAP42A6NI28 874 aa13.27□□□□□ -0.29
LINC01428-201ENST00000449581 SPDYE5A6NIY4 337 aa13.27□□□□□ -0.29
LINC01428-201ENST00000449581 BUD23O43709 281 aaKnown RBP13.27□□□□□ -0.29
LINC01428-201ENST00000449581 BANF1O75531 89 aa13.27□□□□□ -0.29
LINC01428-201ENST00000449581 RBL1P28749 1068 aa13.27□□□□□ -0.29
LINC01428-201ENST00000449581 RPL34P49207 117 aaKnown RBP13.27□□□□□ -0.29
LINC01428-201ENST00000449581 GLUD2P49448 558 aa13.27□□□□□ -0.29
LINC01428-201ENST00000449581 CHN2P52757 468 aa13.27□□□□□ -0.29
LINC01428-201ENST00000449581 MTTPP55157 894 aa13.27□□□□□ -0.29
LINC01428-201ENST00000449581 ABCE1P61221 599 aaKnown RBP13.27□□□□□ -0.29
LINC01428-201ENST00000449581 TMEM132DQ14C87 1099 aa13.27□□□□□ -0.29
LINC01428-201ENST00000449581 MAPRE2Q15555 327 aa13.27□□□□□ -0.29
LINC01428-201ENST00000449581 KCTD19Q17RG1 926 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms