RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 RAD9BQ6WBX8 426 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 TRIM7Q9C029 511 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 ISCUQ9H1K1 167 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 TDP1Q9NUW8 608 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 FAM50BQ9Y247 325 aa10.26□□□□□ -0.77
CCDC171-203ENST00000449575 HEPACAM2A8MVW5 462 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 ANHXE9PGG2 379 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 NARSO43776 548 aaKnown RBP10.25□□□□□ -0.77
CCDC171-203ENST00000449575 GZMAP12544 262 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 PPP3CCP48454 512 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 SKOR1P84550 965 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 SLC18A3Q16572 532 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 DCAF6Q58WW2 860 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 TJAP1Q5JTD0 557 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 CCDC122Q5T0U0 273 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 IER5LQ5T953 404 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 SH3PXD2AQ5TCZ1 1133 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 OTUD1Q5VV17 481 aaPredicted RBP10.25□□□□□ -0.77
CCDC171-203ENST00000449575 SLC26A9Q7LBE3 791 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 NOA1Q8NC60 698 aaKnown RBP10.25□□□□□ -0.77
CCDC171-203ENST00000449575 SH3RF2Q8TEC5 729 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 IRGQQ8WZA9 623 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 ARHGEF26Q96DR7 871 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 ASIC4Q96FT7 647 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 THAP2Q9H0W7 228 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 ZNHIT6Q9NWK9 470 aaKnown RBP10.25□□□□□ -0.77
CCDC171-203ENST00000449575 CLIC5Q9NZA1 410 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 RASAL2Q9UJF2 1139 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 TMEM59LQ9UK28 342 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 NR2E1Q9Y466 385 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 COL4A2P08572 1712 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 SSU72P8A0A1W2PR75 194 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 AKR1B10O60218 316 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 RTN2O75298 545 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 FECHP22830 423 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 ATP5C1P36542 298 aaKnown RBP10.25□□□□□ -0.77
CCDC171-203ENST00000449575 TUBP50607 506 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 ATXN1P54253 815 aaKnown RBP10.25□□□□□ -0.77
CCDC171-203ENST00000449575 SLC7A9P82251 487 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 AMPD2Q01433 879 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 TSR1Q2NL82 804 aaKnown RBP10.25□□□□□ -0.77
CCDC171-203ENST00000449575 WLSQ5T9L3 541 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 ZDHHC14Q8IZN3 488 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 DQX1Q8TE96 717 aaKnown RBP10.25□□□□□ -0.77
CCDC171-203ENST00000449575 KLF16Q9BXK1 252 aaPredicted RBP10.25□□□□□ -0.77
CCDC171-203ENST00000449575 NACA2Q9H009 215 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 POPDC2Q9HBU9 364 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 ZFP14Q9HCL3 533 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 ABCC13Q9NSE7 274 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 PRKAG3Q9UGI9 489 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 GGA2Q9UJY4 613 aa10.25□□□□□ -0.77
CCDC171-203ENST00000449575 SYNJ2BP-COX16A0A087WUM0 186 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 LEFTY2O00292 366 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 NDUFAB1O14561 156 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 RFC1P35251 1148 aaPredicted RBP10.24□□□□□ -0.77
CCDC171-203ENST00000449575 GALCP54803 685 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 CDK17Q00537 523 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 OGDHQ02218 1023 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 C1QBPQ07021 282 aaKnown RBP10.24□□□□□ -0.77
CCDC171-203ENST00000449575 ZNF268Q14587 947 aaPredicted RBP10.24□□□□□ -0.77
CCDC171-203ENST00000449575 TRIM68Q6AZZ1 485 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 TAC4Q86UU9 113 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 RNF135Q8IUD6 432 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 N4BP2L2Q92802 583 aaPredicted RBP10.24□□□□□ -0.77
CCDC171-203ENST00000449575 CCDC42Q96M95 316 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 CFAP57Q96MR6 1250 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 SLC2A13Q96QE2 648 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 SH3GL2Q99962 352 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 LINC00597Q9H2U6 94 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 MARCH2Q9P0N8 246 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 COX16Q9P0S2 106 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 A0A0U1RQJ8 604 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 GREM1O60565 184 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 HSF2BPO75031 334 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 SLC34A2O95436 690 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 KLKB1P03952 638 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 RALAP11233 206 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 DDX6P26196 483 aaKnown RBP eCLIP10.24□□□□□ -0.77
CCDC171-203ENST00000449575 ZNF77Q15935 545 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 C15orf59Q2T9L4 293 aaPredicted RBP10.24□□□□□ -0.77
CCDC171-203ENST00000449575 EFHC1Q5JVL4 640 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 PPP1R15BQ5SWA1 713 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 GJD3Q8N144 294 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 SLC44A3Q8N4M1 653 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 MAGEC3Q8TD91 643 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 ATRIPQ8WXE1 791 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 ZNF653Q96CK0 615 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 P2RY11Q96G91 374 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 TRPV4Q9HBA0 871 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 KLC4Q9NSK0 619 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 CFAP97Q9P2B7 532 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 CNOT8Q9UFF9 292 aaKnown RBP10.24□□□□□ -0.77
CCDC171-203ENST00000449575 DNMT3LQ9UJW3 386 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 ARHGAP26Q9UNA1 814 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 CUL9Q8IWT3 2517 aa10.24□□□□□ -0.77
CCDC171-203ENST00000449575 SLC12A8A0AV02 714 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 CAPN9O14815 690 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 STC2O76061 302 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 CALB1P05937 261 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 TNK2Q07912 1038 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms