RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 MIB1Q86YT6 1006 aa19.98■□□□□ 0.79
RPS28-202ENST00000449223 CCDC50Q8IVM0 306 aa19.98■□□□□ 0.79
RPS28-202ENST00000449223 SHKBP1Q8TBC3 707 aa19.98■□□□□ 0.79
RPS28-202ENST00000449223 RNF25Q96BH1 459 aaPredicted RBP19.98■□□□□ 0.79
RPS28-202ENST00000449223 PLD4Q96BZ4 506 aa19.98■□□□□ 0.79
RPS28-202ENST00000449223 ZFRQ96KR1 1074 aaKnown RBP19.98■□□□□ 0.79
RPS28-202ENST00000449223 C1orf74Q96LT6 269 aa19.98■□□□□ 0.79
RPS28-202ENST00000449223 PRDM12Q9H4Q4 367 aa19.98■□□□□ 0.79
RPS28-202ENST00000449223 KLHL11Q9NVR0 708 aa19.98■□□□□ 0.79
RPS28-202ENST00000449223 MTCH2Q9Y6C9 303 aa19.98■□□□□ 0.79
RPS28-202ENST00000449223 A0A1W2PRU2 124 aa19.97■□□□□ 0.79
RPS28-202ENST00000449223 SLC12A8A0AV02 714 aa19.97■□□□□ 0.79
RPS28-202ENST00000449223 APOEP02649 317 aa19.97■□□□□ 0.79
RPS28-202ENST00000449223 HOXB8P17481 243 aaPredicted RBP19.97■□□□□ 0.79
RPS28-202ENST00000449223 HTR7P34969 479 aa19.97■□□□□ 0.79
RPS28-202ENST00000449223 HCAR3P49019 387 aa19.97■□□□□ 0.79
RPS28-202ENST00000449223 GRIN2CQ14957 1233 aa19.97■□□□□ 0.79
RPS28-202ENST00000449223 ZFYVE27Q5T4F4 411 aa19.97■□□□□ 0.79
RPS28-202ENST00000449223 TXNDC8Q6A555 127 aa19.97■□□□□ 0.79
RPS28-202ENST00000449223 UNC45BQ8IWX7 931 aa19.97■□□□□ 0.79
RPS28-202ENST00000449223 MNS1Q8NEH6 495 aa19.97■□□□□ 0.79
RPS28-202ENST00000449223 MAIP1Q8WWC4 291 aa19.97■□□□□ 0.79
RPS28-202ENST00000449223 RNF34Q969K3 372 aa19.97■□□□□ 0.79
RPS28-202ENST00000449223 AZIN2Q96A70 460 aa19.97■□□□□ 0.79
RPS28-202ENST00000449223 BTN2A3PQ96KV6 586 aa19.97■□□□□ 0.79
RPS28-202ENST00000449223 KCTD15Q96SI1 283 aaPredicted RBP19.97■□□□□ 0.79
RPS28-202ENST00000449223 KLF16Q9BXK1 252 aaPredicted RBP19.97■□□□□ 0.79
RPS28-202ENST00000449223 ATXN3LQ9H3M9 355 aa19.97■□□□□ 0.79
RPS28-202ENST00000449223 DHX35Q9H5Z1 703 aaKnown RBP19.97■□□□□ 0.79
RPS28-202ENST00000449223 PRDM16Q9HAZ2 1276 aa19.97■□□□□ 0.79
RPS28-202ENST00000449223 GPATCH2LQ9NWQ4 482 aa19.97■□□□□ 0.79
RPS28-202ENST00000449223 SZT2Q5T011 3432 aa19.97■□□□□ 0.79
RPS28-202ENST00000449223 NRG2O14511 850 aaPredicted RBP19.97■□□□□ 0.79
RPS28-202ENST00000449223 ZNF197O14709 1029 aa19.97■□□□□ 0.79
RPS28-202ENST00000449223 MYL4P12829 197 aa19.97■□□□□ 0.79
RPS28-202ENST00000449223 CYP4F8P98187 520 aa19.97■□□□□ 0.79
RPS28-202ENST00000449223 ADAM15Q13444 863 aa19.97■□□□□ 0.79
RPS28-202ENST00000449223 KRT81Q14533 505 aa19.97■□□□□ 0.79
RPS28-202ENST00000449223 CTC1Q2NKJ3 1217 aa19.97■□□□□ 0.79
RPS28-202ENST00000449223 SMG7Q92540 1137 aaKnown RBP19.97■□□□□ 0.79
RPS28-202ENST00000449223 HERPUD2Q9BSE4 406 aa19.97■□□□□ 0.79
RPS28-202ENST00000449223 NACA2Q9H009 215 aa19.97■□□□□ 0.79
RPS28-202ENST00000449223 TMPRSS4Q9NRS4 437 aa19.97■□□□□ 0.79
RPS28-202ENST00000449223 SPDYE4A6NLX3 237 aa19.96■□□□□ 0.79
RPS28-202ENST00000449223 TJP3O95049 919 aa19.96■□□□□ 0.79
RPS28-202ENST00000449223 HDCP19113 662 aa19.96■□□□□ 0.79
RPS28-202ENST00000449223 SIX1Q15475 284 aaPredicted RBP19.96■□□□□ 0.79
RPS28-202ENST00000449223 LONRF2Q1L5Z9 754 aa19.96■□□□□ 0.79
RPS28-202ENST00000449223 SLC5A9Q2M3M2 681 aa19.96■□□□□ 0.79
RPS28-202ENST00000449223 ARTNQ5T4W7 220 aa19.96■□□□□ 0.79
RPS28-202ENST00000449223 ZNF697Q5TEC3 545 aa19.96■□□□□ 0.79
RPS28-202ENST00000449223 MANEALQ5VSG8 457 aa19.96■□□□□ 0.79
RPS28-202ENST00000449223 ANKRD54Q6NXT1 300 aa19.96■□□□□ 0.79
RPS28-202ENST00000449223 GRASPQ7Z6J2 395 aaPredicted RBP19.96■□□□□ 0.79
RPS28-202ENST00000449223 PYROXD2Q8N2H3 581 aa19.96■□□□□ 0.79
RPS28-202ENST00000449223 ATP6V0D2Q8N8Y2 350 aa19.96■□□□□ 0.79
RPS28-202ENST00000449223 SPATA4Q8NEY3 305 aa19.96■□□□□ 0.79
RPS28-202ENST00000449223 SLC22A12Q96S37 553 aa19.96■□□□□ 0.79
RPS28-202ENST00000449223 CALN1Q9BXU9 219 aa19.96■□□□□ 0.79
RPS28-202ENST00000449223 SMARCAL1Q9NZC9 954 aa19.96■□□□□ 0.79
RPS28-202ENST00000449223 CWC15Q9P013 229 aaKnown RBP19.96■□□□□ 0.79
RPS28-202ENST00000449223 SLC12A6Q9UHW9 1150 aa19.96■□□□□ 0.79
RPS28-202ENST00000449223 NUP210Q8TEM1 1887 aaPredicted RBP19.95■□□□□ 0.78
RPS28-202ENST00000449223 TRAV19A0A0A6YYK7 116 aa19.95■□□□□ 0.78
RPS28-202ENST00000449223 SOX1O00570 391 aaPredicted RBP19.95■□□□□ 0.78
RPS28-202ENST00000449223 PAGE1O75459 146 aa19.95■□□□□ 0.78
RPS28-202ENST00000449223 STC2O76061 302 aa19.95■□□□□ 0.78
RPS28-202ENST00000449223 LATS1O95835 1130 aa19.95■□□□□ 0.78
RPS28-202ENST00000449223 HOXC13P31276 330 aa19.95■□□□□ 0.78
RPS28-202ENST00000449223 MLLT6P55198 1093 aaPredicted RBP19.95■□□□□ 0.78
RPS28-202ENST00000449223 ARHGAP15Q53QZ3 475 aa19.95■□□□□ 0.78
RPS28-202ENST00000449223 ANKRD20A8PQ5CZ79 823 aa19.95■□□□□ 0.78
RPS28-202ENST00000449223 SLC9A4Q6AI14 798 aa19.95■□□□□ 0.78
RPS28-202ENST00000449223 BBS12Q6ZW61 710 aa19.95■□□□□ 0.78
RPS28-202ENST00000449223 GPR149Q86SP6 731 aa19.95■□□□□ 0.78
RPS28-202ENST00000449223 TCEAL4Q96EI5 215 aa19.95■□□□□ 0.78
RPS28-202ENST00000449223 CSPG4P5Q96PW8 444 aa19.95■□□□□ 0.78
RPS28-202ENST00000449223 RNF157Q96PX1 679 aa19.95■□□□□ 0.78
RPS28-202ENST00000449223 SLC46A2Q9BY10 475 aa19.95■□□□□ 0.78
RPS28-202ENST00000449223 MAGEB5Q9BZ81 275 aa19.95■□□□□ 0.78
RPS28-202ENST00000449223 IGFLR1Q9H665 355 aa19.95■□□□□ 0.78
RPS28-202ENST00000449223 TASP1Q9H6P5 420 aa19.95■□□□□ 0.78
RPS28-202ENST00000449223 OR12D3Q9UGF7 316 aa19.95■□□□□ 0.78
RPS28-202ENST00000449223 NEU3Q9UQ49 428 aa19.95■□□□□ 0.78
RPS28-202ENST00000449223 CTAGE15A4D2H0 777 aa19.94■□□□□ 0.78
RPS28-202ENST00000449223 RIOK3O14730 519 aaKnown RBP19.94■□□□□ 0.78
RPS28-202ENST00000449223 SLU7O95391 586 aaKnown RBP19.94■□□□□ 0.78
RPS28-202ENST00000449223 CTAGE8P0CG41 777 aa19.94■□□□□ 0.78
RPS28-202ENST00000449223 WEE1P30291 646 aa19.94■□□□□ 0.78
RPS28-202ENST00000449223 ARL4AP40617 200 aa19.94■□□□□ 0.78
RPS28-202ENST00000449223 ADCY2Q08462 1091 aa19.94■□□□□ 0.78
RPS28-202ENST00000449223 TFDP2Q14188 446 aa19.94■□□□□ 0.78
RPS28-202ENST00000449223 ADGRE1Q14246 886 aa19.94■□□□□ 0.78
RPS28-202ENST00000449223 CYP1B1Q16678 543 aa19.94■□□□□ 0.78
RPS28-202ENST00000449223 PPP6R3Q5H9R7 873 aaPredicted RBP19.94■□□□□ 0.78
RPS28-202ENST00000449223 SYCE2Q6PIF2 218 aa19.94■□□□□ 0.78
RPS28-202ENST00000449223 TMC5Q6UXY8 1006 aa19.94■□□□□ 0.78
RPS28-202ENST00000449223 CTAGE6Q86UF2 777 aa19.94■□□□□ 0.78
RPS28-202ENST00000449223 CTAGE4Q8IX94 777 aa19.94■□□□□ 0.78
RPS28-202ENST00000449223 ZDHHC14Q8IZN3 488 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms