RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 PPP1R13BQ96KQ4 1090 aa15.2■□□□□ 0.02
USP39-206ENST00000448971 CPXM1Q96SM3 734 aa15.2■□□□□ 0.02
USP39-206ENST00000448971 DCLK3Q9C098 648 aa15.2■□□□□ 0.02
USP39-206ENST00000448971 LHX5Q9H2C1 402 aa15.2■□□□□ 0.02
USP39-206ENST00000448971 SMOC1Q9H4F8 434 aa15.2■□□□□ 0.02
USP39-206ENST00000448971 SPHK2Q9NRA0 654 aa15.2■□□□□ 0.02
USP39-206ENST00000448971 TJP2Q9UDY2 1190 aa15.2■□□□□ 0.02
USP39-206ENST00000448971 SLC8A2Q9UPR5 921 aa15.2■□□□□ 0.02
USP39-206ENST00000448971 ASPMQ8IZT6 3477 aa15.2■□□□□ 0.02
USP39-206ENST00000448971 ATRXP46100 2492 aa15.19■□□□□ 0.02
USP39-206ENST00000448971 FAM170AA1A519 330 aa15.19■□□□□ 0.02
USP39-206ENST00000448971 NEDD8-MDP1E9PL57 170 aa15.19■□□□□ 0.02
USP39-206ENST00000448971 PAPSS1O43252 624 aaPredicted RBP15.19■□□□□ 0.02
USP39-206ENST00000448971 GREM1O60565 184 aa15.19■□□□□ 0.02
USP39-206ENST00000448971 RNF40O75150 1001 aa15.19■□□□□ 0.02
USP39-206ENST00000448971 KCNK5O95279 499 aa15.19■□□□□ 0.02
USP39-206ENST00000448971 DRD1P21728 446 aa15.19■□□□□ 0.02
USP39-206ENST00000448971 OPRD1P41143 372 aa15.19■□□□□ 0.02
USP39-206ENST00000448971 RPL34P49207 117 aaKnown RBP15.19■□□□□ 0.02
USP39-206ENST00000448971 JAM2P57087 298 aa15.19■□□□□ 0.02
USP39-206ENST00000448971 SNX16P57768 344 aa15.19■□□□□ 0.02
USP39-206ENST00000448971 KDSRQ06136 332 aa15.19■□□□□ 0.02
USP39-206ENST00000448971 MSANTD2Q6P1R3 559 aa15.19■□□□□ 0.02
USP39-206ENST00000448971 RHBDF2Q6PJF5 856 aa15.19■□□□□ 0.02
USP39-206ENST00000448971 Q6ZNB5 142 aa15.19■□□□□ 0.02
USP39-206ENST00000448971 TPGS1Q6ZTW0 290 aa15.19■□□□□ 0.02
USP39-206ENST00000448971 DENND1CQ8IV53 801 aa15.19■□□□□ 0.02
USP39-206ENST00000448971 TMEM35BQ8NCS4 154 aa15.19■□□□□ 0.02
USP39-206ENST00000448971 EZH1Q92800 747 aaPredicted RBP15.19■□□□□ 0.02
USP39-206ENST00000448971 BBS2Q9BXC9 721 aa15.19■□□□□ 0.02
USP39-206ENST00000448971 DUSP15Q9H1R2 295 aaPredicted RBP15.19■□□□□ 0.02
USP39-206ENST00000448971 ZNF510Q9Y2H8 683 aa15.19■□□□□ 0.02
USP39-206ENST00000448971 HBS1LQ9Y450 684 aaKnown RBP15.19■□□□□ 0.02
USP39-206ENST00000448971 IGF2RP11717 2491 aa15.19■□□□□ 0.02
USP39-206ENST00000448971 NUP205Q92621 2012 aa15.18■□□□□ 0.02
USP39-206ENST00000448971 PCNX2A6NKB5 2137 aa15.18■□□□□ 0.02
USP39-206ENST00000448971 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.18■□□□□ 0.02
USP39-206ENST00000448971 TEX33O43247 280 aa15.18■□□□□ 0.02
USP39-206ENST00000448971 HOXC11O43248 304 aaPredicted RBP15.18■□□□□ 0.02
USP39-206ENST00000448971 MMEP08473 750 aa15.18■□□□□ 0.02
USP39-206ENST00000448971 MPLP40238 635 aa15.18■□□□□ 0.02
USP39-206ENST00000448971 HARS2P49590 506 aaKnown RBP15.18■□□□□ 0.02
USP39-206ENST00000448971 ARID5AQ03989 594 aa15.18■□□□□ 0.02
USP39-206ENST00000448971 NFKBIBQ15653 356 aa15.18■□□□□ 0.02
USP39-206ENST00000448971 PTPN20Q4JDL3 420 aa15.18■□□□□ 0.02
USP39-206ENST00000448971 OR6B2Q6IFH4 312 aa15.18■□□□□ 0.02
USP39-206ENST00000448971 TOGARAM2Q6ZUX3 1019 aa15.18■□□□□ 0.02
USP39-206ENST00000448971 FAM183BPQ6ZVS7 135 aa15.18■□□□□ 0.02
USP39-206ENST00000448971 TMEM110Q86TL2 294 aa15.18■□□□□ 0.02
USP39-206ENST00000448971 C12orf40Q86WS4 652 aa15.18■□□□□ 0.02
USP39-206ENST00000448971 MSANTD4Q8NCY6 345 aa15.18■□□□□ 0.02
USP39-206ENST00000448971 DQX1Q8TE96 717 aaKnown RBP15.18■□□□□ 0.02
USP39-206ENST00000448971 SLC20A1Q8WUM9 679 aa15.18■□□□□ 0.02
USP39-206ENST00000448971 BHMTQ93088 406 aa15.18■□□□□ 0.02
USP39-206ENST00000448971 PIWIL1Q96J94 861 aaKnown RBP15.18■□□□□ 0.02
USP39-206ENST00000448971 SERPINB11Q96P15 392 aa15.18■□□□□ 0.02
USP39-206ENST00000448971 POPDC2Q9HBU9 364 aa15.18■□□□□ 0.02
USP39-206ENST00000448971 VPS45Q9NRW7 570 aa15.18■□□□□ 0.02
USP39-206ENST00000448971 EBF1Q9UH73 591 aa15.18■□□□□ 0.02
USP39-206ENST00000448971 ZFYVE26Q68DK2 2539 aa15.18■□□□□ 0.02
USP39-206ENST00000448971 A0A1B0GTH6 734 aa15.17■□□□□ 0.02
USP39-206ENST00000448971 LSM8O95777 96 aaKnown RBP15.17■□□□□ 0.02
USP39-206ENST00000448971 ERBB2P04626 1255 aa15.17■□□□□ 0.02
USP39-206ENST00000448971 CHKAP35790 457 aa15.17■□□□□ 0.02
USP39-206ENST00000448971 EIF2DP41214 584 aaKnown RBP15.17■□□□□ 0.02
USP39-206ENST00000448971 GAB4Q2WGN9 574 aa15.17■□□□□ 0.02
USP39-206ENST00000448971 FBXO43Q4G163 708 aa15.17■□□□□ 0.02
USP39-206ENST00000448971 TCEAL6Q6IPX3 200 aa15.17■□□□□ 0.02
USP39-206ENST00000448971 SYT13Q7L8C5 426 aa15.17■□□□□ 0.02
USP39-206ENST00000448971 TAC4Q86UU9 113 aa15.17■□□□□ 0.02
USP39-206ENST00000448971 ZNF677Q86XU0 584 aa15.17■□□□□ 0.02
USP39-206ENST00000448971 TMEM25Q86YD3 366 aa15.17■□□□□ 0.02
USP39-206ENST00000448971 WDTC1Q8N5D0 677 aa15.17■□□□□ 0.02
USP39-206ENST00000448971 NAT16Q8N8M0 369 aa15.17■□□□□ 0.02
USP39-206ENST00000448971 TCEAL3Q969E4 200 aa15.17■□□□□ 0.02
USP39-206ENST00000448971 XPO6Q96QU8 1125 aaKnown RBP15.17■□□□□ 0.02
USP39-206ENST00000448971 PNKPQ96T60 521 aa15.17■□□□□ 0.02
USP39-206ENST00000448971 ARHGEF4Q9NR80 690 aa15.17■□□□□ 0.02
USP39-206ENST00000448971 SEPT11Q9NVA2 429 aaKnown RBP15.17■□□□□ 0.02
USP39-206ENST00000448971 AGO1Q9UL18 857 aaKnown RBP15.17■□□□□ 0.02
USP39-206ENST00000448971 NAALADL1Q9UQQ1 740 aa15.17■□□□□ 0.02
USP39-206ENST00000448971 SPEGQ15772 3267 aa15.16■□□□□ 0.02
USP39-206ENST00000448971 ASCC3Q8N3C0 2202 aaKnown RBP15.16■□□□□ 0.02
USP39-206ENST00000448971 DCLK1O15075 740 aa15.16■□□□□ 0.02
USP39-206ENST00000448971 HSF2BPO75031 334 aa15.16■□□□□ 0.02
USP39-206ENST00000448971 GRAP2O75791 330 aa15.16■□□□□ 0.02
USP39-206ENST00000448971 KLKB1P03952 638 aa15.16■□□□□ 0.02
USP39-206ENST00000448971 CYBBP04839 570 aa15.16■□□□□ 0.02
USP39-206ENST00000448971 APODP05090 189 aa15.16■□□□□ 0.02
USP39-206ENST00000448971 TYRP14679 529 aa15.16■□□□□ 0.02
USP39-206ENST00000448971 SEC13P55735 322 aa15.16■□□□□ 0.02
USP39-206ENST00000448971 TBX4P57082 545 aa15.16■□□□□ 0.02
USP39-206ENST00000448971 YWHAZP63104 245 aaKnown RBP15.16■□□□□ 0.02
USP39-206ENST00000448971 FANCCQ00597 558 aa15.16■□□□□ 0.02
USP39-206ENST00000448971 CDR2Q01850 454 aa15.16■□□□□ 0.02
USP39-206ENST00000448971 TRIP4Q15650 581 aaPredicted RBP15.16■□□□□ 0.02
USP39-206ENST00000448971 NAA35Q5VZE5 725 aa15.16■□□□□ 0.02
USP39-206ENST00000448971 NUGGCQ68CJ6 796 aa15.16■□□□□ 0.02
USP39-206ENST00000448971 OLFML1Q6UWY5 402 aa15.16■□□□□ 0.02
USP39-206ENST00000448971 ADAM32Q8TC27 787 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms