RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 WRNIP1Q96S55 665 aa16.29■□□□□ 0.2
CHRD-205ENST00000448472 B3GNT5Q9BYG0 378 aa16.29■□□□□ 0.2
CHRD-205ENST00000448472 SERPINE1P05121 402 aa16.29■□□□□ 0.2
CHRD-205ENST00000448472 P4HA1P13674 534 aa16.29■□□□□ 0.2
CHRD-205ENST00000448472 MX2P20592 715 aa16.29■□□□□ 0.2
CHRD-205ENST00000448472 ALDH1A3P47895 512 aa16.29■□□□□ 0.2
CHRD-205ENST00000448472 NDST1P52848 882 aa16.29■□□□□ 0.2
CHRD-205ENST00000448472 FSCBQ5H9T9 825 aa16.29■□□□□ 0.2
CHRD-205ENST00000448472 SLC4A11Q8NBS3 891 aa16.29■□□□□ 0.2
CHRD-205ENST00000448472 FAM81AQ8TBF8 368 aa16.29■□□□□ 0.2
CHRD-205ENST00000448472 TMA16Q96EY4 203 aaKnown RBP16.29■□□□□ 0.2
CHRD-205ENST00000448472 ACO2Q99798 780 aaKnown RBP16.29■□□□□ 0.2
CHRD-205ENST00000448472 UNKQ9C0B0 810 aaKnown RBP16.29■□□□□ 0.2
CHRD-205ENST00000448472 DEFB129Q9H1M3 183 aa16.29■□□□□ 0.2
CHRD-205ENST00000448472 TMEM216Q9P0N5 145 aa16.29■□□□□ 0.2
CHRD-205ENST00000448472 HESX1Q9UBX0 185 aa16.29■□□□□ 0.2
CHRD-205ENST00000448472 GJA3Q9Y6H8 435 aa16.29■□□□□ 0.2
CHRD-205ENST00000448472 FLOT2Q14254 428 aa16.29■□□□□ 0.2
CHRD-205ENST00000448472 AMHR2Q16671 573 aa16.29■□□□□ 0.2
CHRD-205ENST00000448472 BOLA3Q53S33 107 aa16.29■□□□□ 0.2
CHRD-205ENST00000448472 MAP3K21Q5TCX8 1036 aa16.29■□□□□ 0.2
CHRD-205ENST00000448472 XRRA1Q6P2D8 792 aa16.29■□□□□ 0.2
CHRD-205ENST00000448472 FAM43BQ6ZT52 329 aaPredicted RBP16.29■□□□□ 0.2
CHRD-205ENST00000448472 SH2D5Q6ZV89 423 aa16.29■□□□□ 0.2
CHRD-205ENST00000448472 FNIP1Q8TF40 1166 aa16.29■□□□□ 0.2
CHRD-205ENST00000448472 MARK4Q96L34 752 aa16.29■□□□□ 0.2
CHRD-205ENST00000448472 KCNK16Q96T55 309 aa16.29■□□□□ 0.2
CHRD-205ENST00000448472 TEX13BQ9BXU2 312 aa16.29■□□□□ 0.2
CHRD-205ENST00000448472 WDR55Q9H6Y2 383 aaPredicted RBP16.29■□□□□ 0.2
CHRD-205ENST00000448472 RPS6KL1Q9Y6S9 549 aa16.29■□□□□ 0.2
CHRD-205ENST00000448472 PEX1O43933 1283 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 CPA3P15088 417 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 PHKA2P46019 1235 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 IDH3AP50213 366 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 ART3Q13508 389 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 CCNIQ14094 377 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 GOLGA7BQ2TAP0 167 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 TEX44Q53QW1 395 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 TEDDM1Q5T9Z0 273 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 ZPBP2Q6X784 338 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 HPDLQ96IR7 371 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 CDRT15Q96T59 188 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 LGMNQ99538 433 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 PCDH18Q9HCL0 1135 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 ZNF180Q9UJW8 692 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 COMMD3-BMI1R4GMX3 469 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 SCN9AQ15858 1988 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 GOLGA8TH3BQL2 631 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 ATP9BO43861 1147 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 LCP1P13796 627 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 NELFEP18615 380 aaKnown RBP16.28■□□□□ 0.2
CHRD-205ENST00000448472 RXRBP28702 533 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 PDE1CQ14123 709 aaPredicted RBP16.28■□□□□ 0.2
CHRD-205ENST00000448472 TMEM132BQ14DG7 1078 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 AAGABQ6PD74 315 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 ACOT1Q86TX2 421 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 NCAPG2Q86XI2 1143 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 SSX2IPQ9Y2D8 614 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 PSAT1Q9Y617 370 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 GARSP41250 739 aaKnown RBP16.28■□□□□ 0.2
CHRD-205ENST00000448472 RARS2Q5T160 578 aaKnown RBP16.28■□□□□ 0.2
CHRD-205ENST00000448472 STYK1Q6J9G0 422 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 KYAT3Q6YP21 454 aaKnown RBP16.28■□□□□ 0.2
CHRD-205ENST00000448472 ARCQ7LC44 396 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 PTAR1Q7Z6K3 402 aaPredicted RBP16.28■□□□□ 0.2
CHRD-205ENST00000448472 SNX32Q86XE0 403 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 CNKSR2Q8WXI2 1034 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 TSNARE1Q96NA8 513 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 NRDE2Q9H7Z3 1164 aa16.28■□□□□ 0.2
CHRD-205ENST00000448472 ITGBL1O95965 494 aaPredicted RBP16.27■□□□□ 0.2
CHRD-205ENST00000448472 HOXC6P09630 235 aa16.27■□□□□ 0.2
CHRD-205ENST00000448472 SPATA31D3P0C874 917 aa16.27■□□□□ 0.2
CHRD-205ENST00000448472 COX4I1P13073 169 aa16.27■□□□□ 0.2
CHRD-205ENST00000448472 AOC1P19801 751 aa16.27■□□□□ 0.2
CHRD-205ENST00000448472 LY6KQ17RY6 165 aa16.27■□□□□ 0.2
CHRD-205ENST00000448472 NBPF12Q5TAG4 269 aaPredicted RBP16.27■□□□□ 0.2
CHRD-205ENST00000448472 MPZL3Q6UWV2 235 aa16.27■□□□□ 0.2
CHRD-205ENST00000448472 SPATA31D4Q6ZUB0 917 aa16.27■□□□□ 0.2
CHRD-205ENST00000448472 SNRNP27Q8WVK2 155 aaKnown RBP16.27■□□□□ 0.2
CHRD-205ENST00000448472 OXCT2Q9BYC2 517 aaPredicted RBP16.27■□□□□ 0.2
CHRD-205ENST00000448472 FRMD8Q9BZ67 464 aaPredicted RBP16.27■□□□□ 0.2
CHRD-205ENST00000448472 XYLT2Q9H1B5 865 aa16.27■□□□□ 0.2
CHRD-205ENST00000448472 SPATA31C2B4DYI2 1134 aa16.27■□□□□ 0.2
CHRD-205ENST00000448472 BIRC5O15392 142 aa16.27■□□□□ 0.2
CHRD-205ENST00000448472 MSCO60682 206 aa16.27■□□□□ 0.2
CHRD-205ENST00000448472 SRGAP2BP0DMP2 458 aa16.27■□□□□ 0.2
CHRD-205ENST00000448472 PRKCHP24723 683 aa16.27■□□□□ 0.2
CHRD-205ENST00000448472 GABRB2P47870 512 aa16.27■□□□□ 0.2
CHRD-205ENST00000448472 GLRBP48167 497 aa16.27■□□□□ 0.2
CHRD-205ENST00000448472 USP46P62068 366 aa16.27■□□□□ 0.2
CHRD-205ENST00000448472 ANKRD20A4Q4UJ75 823 aa16.27■□□□□ 0.2
CHRD-205ENST00000448472 JADE1Q6IE81 842 aa16.27■□□□□ 0.2
CHRD-205ENST00000448472 PID1Q7Z2X4 250 aa16.27■□□□□ 0.2
CHRD-205ENST00000448472 SESTD1Q86VW0 696 aa16.27■□□□□ 0.2
CHRD-205ENST00000448472 JADE3Q92613 823 aa16.27■□□□□ 0.2
CHRD-205ENST00000448472 AZIN2Q96A70 460 aa16.27■□□□□ 0.2
CHRD-205ENST00000448472 LENG8Q96PV6 779 aaPredicted RBP16.27■□□□□ 0.2
CHRD-205ENST00000448472 PHF12Q96QT6 1004 aa16.27■□□□□ 0.2
CHRD-205ENST00000448472 APOL2Q9BQE5 337 aa16.27■□□□□ 0.2
CHRD-205ENST00000448472 FERMT1Q9BQL6 677 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms