RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 PIGHQ14442 188 aaPredicted RBP12.05□□□□□ -0.48
LINC00408-201ENST00000447784 IFI16Q16666 785 aaKnown RBP12.05□□□□□ -0.48
LINC00408-201ENST00000447784 CDO1Q16878 200 aa12.05□□□□□ -0.48
LINC00408-201ENST00000447784 ARL13BQ3SXY8 428 aa12.05□□□□□ -0.48
LINC00408-201ENST00000447784 CCDC14Q49A88 953 aa12.05□□□□□ -0.48
LINC00408-201ENST00000447784 NUGGCQ68CJ6 796 aa12.05□□□□□ -0.48
LINC00408-201ENST00000447784 SLC35G2Q8TBE7 412 aa12.05□□□□□ -0.48
LINC00408-201ENST00000447784 ZNF564Q8TBZ8 553 aaPredicted RBP12.05□□□□□ -0.48
LINC00408-201ENST00000447784 BPIFB1Q8TDL5 484 aa12.05□□□□□ -0.48
LINC00408-201ENST00000447784 CALR3Q96L12 384 aaKnown RBP12.05□□□□□ -0.48
LINC00408-201ENST00000447784 ZNF830Q96NB3 372 aaPredicted RBP12.05□□□□□ -0.48
LINC00408-201ENST00000447784 TBCBQ99426 244 aa12.05□□□□□ -0.48
LINC00408-201ENST00000447784 NELL2Q99435 816 aa12.05□□□□□ -0.48
LINC00408-201ENST00000447784 OSBPL6Q9BZF3 934 aa12.05□□□□□ -0.48
LINC00408-201ENST00000447784 TSGA10Q9BZW7 698 aa12.05□□□□□ -0.48
LINC00408-201ENST00000447784 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.05□□□□□ -0.48
LINC00408-201ENST00000447784 CCL26Q9Y258 94 aa12.05□□□□□ -0.48
LINC00408-201ENST00000447784 ZNF510Q9Y2H8 683 aa12.05□□□□□ -0.48
LINC00408-201ENST00000447784 SIT1Q9Y3P8 196 aa12.05□□□□□ -0.48
LINC00408-201ENST00000447784 DOCK8Q8NF50 2099 aa12.04□□□□□ -0.48
LINC00408-201ENST00000447784 E2F8A0AVK6 867 aa12.04□□□□□ -0.48
LINC00408-201ENST00000447784 CHADO15335 359 aa12.04□□□□□ -0.48
LINC00408-201ENST00000447784 IRAK2O43187 625 aa12.04□□□□□ -0.48
LINC00408-201ENST00000447784 GLULP15104 373 aa12.04□□□□□ -0.48
LINC00408-201ENST00000447784 GDI1P31150 447 aa12.04□□□□□ -0.48
LINC00408-201ENST00000447784 NHLH1Q02575 133 aa12.04□□□□□ -0.48
LINC00408-201ENST00000447784 RING1Q06587 406 aa12.04□□□□□ -0.48
LINC00408-201ENST00000447784 GRM2Q14416 872 aa12.04□□□□□ -0.48
LINC00408-201ENST00000447784 ACAP1Q15027 740 aa12.04□□□□□ -0.48
LINC00408-201ENST00000447784 SCYL2Q6P3W7 929 aa12.04□□□□□ -0.48
LINC00408-201ENST00000447784 STRADAQ7RTN6 431 aa12.04□□□□□ -0.48
LINC00408-201ENST00000447784 CCDC105Q8IYK2 499 aa12.04□□□□□ -0.48
LINC00408-201ENST00000447784 KIAA1958Q8N8K9 716 aa12.04□□□□□ -0.48
LINC00408-201ENST00000447784 PJA1Q8NG27 643 aa12.04□□□□□ -0.48
LINC00408-201ENST00000447784 FNIP1Q8TF40 1166 aa12.04□□□□□ -0.48
LINC00408-201ENST00000447784 FAM172AQ8WUF8 416 aa12.04□□□□□ -0.48
LINC00408-201ENST00000447784 NT5C3BQ969T7 300 aa12.04□□□□□ -0.48
LINC00408-201ENST00000447784 RSPRY1Q96DX4 576 aa12.04□□□□□ -0.48
LINC00408-201ENST00000447784 DDX50Q9BQ39 737 aaKnown RBP12.04□□□□□ -0.48
LINC00408-201ENST00000447784 WDCPQ9H6R7 721 aa12.04□□□□□ -0.48
LINC00408-201ENST00000447784 TBC1D14Q9P2M4 693 aa12.04□□□□□ -0.48
LINC00408-201ENST00000447784 ADGRG1Q9Y653 693 aa12.04□□□□□ -0.48
LINC00408-201ENST00000447784 A0A0A6YYK5 440 aaPredicted RBP12.03□□□□□ -0.48
LINC00408-201ENST00000447784 TMEM110-MUSTN1A8MSY1 372 aa12.03□□□□□ -0.48
LINC00408-201ENST00000447784 ARNTLO00327 626 aa12.03□□□□□ -0.48
LINC00408-201ENST00000447784 MAN2B1O00754 1011 aa12.03□□□□□ -0.48
LINC00408-201ENST00000447784 CCP110O43303 1012 aa12.03□□□□□ -0.48
LINC00408-201ENST00000447784 ZSCAN12O43309 604 aa12.03□□□□□ -0.48
LINC00408-201ENST00000447784 KRT86O43790 486 aa12.03□□□□□ -0.48
LINC00408-201ENST00000447784 STC2O76061 302 aa12.03□□□□□ -0.48
LINC00408-201ENST00000447784 MOCS2O96007 188 aaPredicted RBP12.03□□□□□ -0.48
LINC00408-201ENST00000447784 TCF3P15923 654 aa12.03□□□□□ -0.48
LINC00408-201ENST00000447784 CORO1AP31146 461 aaKnown RBP12.03□□□□□ -0.48
LINC00408-201ENST00000447784 ARHGAP25P42331 645 aa12.03□□□□□ -0.48
LINC00408-201ENST00000447784 IFNAR2P48551 515 aa12.03□□□□□ -0.48
LINC00408-201ENST00000447784 PITX1P78337 314 aaPredicted RBP12.03□□□□□ -0.48
LINC00408-201ENST00000447784 MESDQ14696 234 aa12.03□□□□□ -0.48
LINC00408-201ENST00000447784 PPP2R5DQ14738 602 aa12.03□□□□□ -0.48
LINC00408-201ENST00000447784 TCEAL1Q15170 157 aa12.03□□□□□ -0.48
LINC00408-201ENST00000447784 PDGFRLQ15198 375 aa12.03□□□□□ -0.48
LINC00408-201ENST00000447784 C15orf59Q2T9L4 293 aaPredicted RBP12.03□□□□□ -0.48
LINC00408-201ENST00000447784 ARHGAP29Q52LW3 1261 aa12.03□□□□□ -0.48
LINC00408-201ENST00000447784 ZC3H12AQ5D1E8 599 aaKnown RBP12.03□□□□□ -0.48
LINC00408-201ENST00000447784 BRMS1LQ5PSV4 323 aa12.03□□□□□ -0.48
LINC00408-201ENST00000447784 TRNP1Q6NT89 227 aa12.03□□□□□ -0.48
LINC00408-201ENST00000447784 HTR3DQ70Z44 454 aa12.03□□□□□ -0.48
LINC00408-201ENST00000447784 DENND1CQ8IV53 801 aa12.03□□□□□ -0.48
LINC00408-201ENST00000447784 ATP6V0D2Q8N8Y2 350 aa12.03□□□□□ -0.48
LINC00408-201ENST00000447784 DTWD2Q8NBA8 298 aa12.03□□□□□ -0.48
LINC00408-201ENST00000447784 TRIM44Q96DX7 344 aaPredicted RBP12.03□□□□□ -0.48
LINC00408-201ENST00000447784 PGAP3Q96FM1 320 aaPredicted RBP12.03□□□□□ -0.48
LINC00408-201ENST00000447784 MSANTD3Q96H12 275 aa12.03□□□□□ -0.48
LINC00408-201ENST00000447784 ZFRQ96KR1 1074 aaKnown RBP12.03□□□□□ -0.48
LINC00408-201ENST00000447784 HEBP1Q9NRV9 189 aa12.03□□□□□ -0.48
LINC00408-201ENST00000447784 PIGVQ9NUD9 493 aa12.03□□□□□ -0.48
LINC00408-201ENST00000447784 DUS2Q9NX74 493 aaKnown RBP12.03□□□□□ -0.48
LINC00408-201ENST00000447784 DLGAP2Q9P1A6 1054 aa12.03□□□□□ -0.48
LINC00408-201ENST00000447784 MRPS17Q9Y2R5 130 aaKnown RBP12.03□□□□□ -0.48
LINC00408-201ENST00000447784 REXO2Q9Y3B8 237 aaKnown RBP12.03□□□□□ -0.48
LINC00408-201ENST00000447784 BTNL10A8MVZ5 291 aa12.02□□□□□ -0.49
LINC00408-201ENST00000447784 PRPSAP2O60256 369 aa12.02□□□□□ -0.49
LINC00408-201ENST00000447784 MTA2O94776 668 aa12.02□□□□□ -0.49
LINC00408-201ENST00000447784 PROSCO94903 275 aa12.02□□□□□ -0.49
LINC00408-201ENST00000447784 ENDOD1O94919 500 aa12.02□□□□□ -0.49
LINC00408-201ENST00000447784 LATS1O95835 1130 aa12.02□□□□□ -0.49
LINC00408-201ENST00000447784 IGLV3-25P01717 112 aa12.02□□□□□ -0.49
LINC00408-201ENST00000447784 TFE3P19532 575 aaPredicted RBP12.02□□□□□ -0.49
LINC00408-201ENST00000447784 MAGEA9P43362 315 aa12.02□□□□□ -0.49
LINC00408-201ENST00000447784 CXCR3P49682 368 aa12.02□□□□□ -0.49
LINC00408-201ENST00000447784 OGDHQ02218 1023 aa12.02□□□□□ -0.49
LINC00408-201ENST00000447784 USP4Q13107 963 aa12.02□□□□□ -0.49
LINC00408-201ENST00000447784 ZNF77Q15935 545 aa12.02□□□□□ -0.49
LINC00408-201ENST00000447784 HADHQ16836 314 aaKnown RBP12.02□□□□□ -0.49
LINC00408-201ENST00000447784 C1orf228Q6PIY5 440 aa12.02□□□□□ -0.49
LINC00408-201ENST00000447784 ZNF852Q6ZMS4 543 aa12.02□□□□□ -0.49
LINC00408-201ENST00000447784 TPRG1Q6ZUI0 275 aa12.02□□□□□ -0.49
LINC00408-201ENST00000447784 FAM131BQ86XD5 332 aa12.02□□□□□ -0.49
LINC00408-201ENST00000447784 CENPIQ92674 756 aaPredicted RBP12.02□□□□□ -0.49
LINC00408-201ENST00000447784 OTUB2Q96DC9 234 aa12.02□□□□□ -0.49
LINC00408-201ENST00000447784 BTN2A3PQ96KV6 586 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms