RNA–Protein interactions for RNA: ENST00000447696.5

MRPL28-205, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 722 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-205ENST00000447696 RAPGEF1Q13905 1077 aa24.98■■□□□ 1.59
MRPL28-205ENST00000447696 DRAP1Q14919 205 aaPredicted RBP24.98■■□□□ 1.59
MRPL28-205ENST00000447696 KRT31Q15323 416 aa24.98■■□□□ 1.59
MRPL28-205ENST00000447696 CSRP2Q16527 193 aa24.98■■□□□ 1.59
MRPL28-205ENST00000447696 USP39Q53GS9 565 aaKnown RBP24.98■■□□□ 1.59
MRPL28-205ENST00000447696 EGFLAMQ63HQ2 1017 aa24.98■■□□□ 1.59
MRPL28-205ENST00000447696 KBTBD6Q86V97 674 aa24.98■■□□□ 1.59
MRPL28-205ENST00000447696 WDTC1Q8N5D0 677 aa24.98■■□□□ 1.59
MRPL28-205ENST00000447696 DDI1Q8WTU0 396 aa24.98■■□□□ 1.59
MRPL28-205ENST00000447696 LSM14BQ9BX40 385 aaKnown RBP24.98■■□□□ 1.59
MRPL28-205ENST00000447696 POPDC2Q9HBU9 364 aa24.98■■□□□ 1.59
MRPL28-205ENST00000447696 TLR6Q9Y2C9 796 aa24.98■■□□□ 1.59
MRPL28-205ENST00000447696 FHOD1Q9Y613 1164 aa24.98■■□□□ 1.59
MRPL28-205ENST00000447696 GLI1P08151 1106 aa24.97■■□□□ 1.59
MRPL28-205ENST00000447696 SNX16P57768 344 aa24.97■■□□□ 1.59
MRPL28-205ENST00000447696 YWHAZP63104 245 aaKnown RBP24.97■■□□□ 1.59
MRPL28-205ENST00000447696 E2F5Q15329 346 aa24.97■■□□□ 1.59
MRPL28-205ENST00000447696 SDE2Q6IQ49 451 aa24.97■■□□□ 1.59
MRPL28-205ENST00000447696 SLC47A2Q86VL8 602 aa24.97■■□□□ 1.59
MRPL28-205ENST00000447696 PIWIL1Q96J94 861 aaKnown RBP24.97■■□□□ 1.59
MRPL28-205ENST00000447696 PPP1R13BQ96KQ4 1090 aa24.97■■□□□ 1.59
MRPL28-205ENST00000447696 ZDHHC4Q9NPG8 344 aa24.97■■□□□ 1.59
MRPL28-205ENST00000447696 SEMA4GQ9NTN9 838 aa24.97■■□□□ 1.59
MRPL28-205ENST00000447696 FANCLQ9NW38 375 aa24.97■■□□□ 1.59
MRPL28-205ENST00000447696 ASNSD1Q9NWL6 643 aa24.97■■□□□ 1.59
MRPL28-205ENST00000447696 NAALADL1Q9UQQ1 740 aa24.97■■□□□ 1.59
MRPL28-205ENST00000447696 CEP83Q9Y592 693 aa24.97■■□□□ 1.59
MRPL28-205ENST00000447696 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.97■■□□□ 1.59
MRPL28-205ENST00000447696 USP24Q9UPU5 2620 aa24.97■■□□□ 1.59
MRPL28-205ENST00000447696 EML5Q05BV3 1969 aa24.96■■□□□ 1.59
MRPL28-205ENST00000447696 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.96■■□□□ 1.59
MRPL28-205ENST00000447696 CAPN9O14815 690 aa24.96■■□□□ 1.59
MRPL28-205ENST00000447696 NPC1O15118 1278 aa24.96■■□□□ 1.59
MRPL28-205ENST00000447696 IRAK2O43187 625 aa24.96■■□□□ 1.59
MRPL28-205ENST00000447696 PNMA6AP0CW24 399 aaPredicted RBP24.96■■□□□ 1.59
MRPL28-205ENST00000447696 HOXB2P14652 356 aa24.96■■□□□ 1.59
MRPL28-205ENST00000447696 HOXD9P28356 352 aaPredicted RBP24.96■■□□□ 1.59
MRPL28-205ENST00000447696 EIF4HQ15056 248 aaKnown RBP24.96■■□□□ 1.59
MRPL28-205ENST00000447696 PLK5Q496M5 336 aa24.96■■□□□ 1.59
MRPL28-205ENST00000447696 ANKS1BQ7Z6G8 1248 aa24.96■■□□□ 1.59
MRPL28-205ENST00000447696 PASD1Q8IV76 773 aa24.96■■□□□ 1.59
MRPL28-205ENST00000447696 CHPFQ8IZ52 775 aa24.96■■□□□ 1.59
MRPL28-205ENST00000447696 OLIG1Q8TAK6 271 aa24.96■■□□□ 1.59
MRPL28-205ENST00000447696 FCRL2Q96LA5 508 aaPredicted RBP24.96■■□□□ 1.59
MRPL28-205ENST00000447696 CPXM1Q96SM3 734 aa24.96■■□□□ 1.59
MRPL28-205ENST00000447696 GABRG3Q99928 467 aa24.96■■□□□ 1.59
MRPL28-205ENST00000447696 TPSD1Q9BZJ3 242 aa24.96■■□□□ 1.59
MRPL28-205ENST00000447696 DAAM1Q9Y4D1 1078 aa24.96■■□□□ 1.59
MRPL28-205ENST00000447696 CACNA1GO43497 2377 aa24.95■■□□□ 1.59
MRPL28-205ENST00000447696 TCRBV21S2A2A0A5A6 115 aa24.95■■□□□ 1.58
MRPL28-205ENST00000447696 ACSL4O60488 711 aa24.95■■□□□ 1.58
MRPL28-205ENST00000447696 EPN2O95208 641 aa24.95■■□□□ 1.58
MRPL28-205ENST00000447696 ELF2Q15723 593 aa24.95■■□□□ 1.58
MRPL28-205ENST00000447696 FKBP15Q5T1M5 1219 aa24.95■■□□□ 1.58
MRPL28-205ENST00000447696 MPP7Q5T2T1 576 aa24.95■■□□□ 1.58
MRPL28-205ENST00000447696 PRR23CQ6ZRP0 262 aa24.95■■□□□ 1.58
MRPL28-205ENST00000447696 TAC4Q86UU9 113 aa24.95■■□□□ 1.58
MRPL28-205ENST00000447696 C1orf131Q8NDD1 294 aaKnown RBP24.95■■□□□ 1.58
MRPL28-205ENST00000447696 ANKRD20A12PQ8NF67 263 aa24.95■■□□□ 1.58
MRPL28-205ENST00000447696 UCMAQ8WVF2 138 aa24.95■■□□□ 1.58
MRPL28-205ENST00000447696 TMA16Q96EY4 203 aaKnown RBP24.95■■□□□ 1.58
MRPL28-205ENST00000447696 SLC39A13Q96H72 371 aa24.95■■□□□ 1.58
MRPL28-205ENST00000447696 DDX50Q9BQ39 737 aaKnown RBP24.95■■□□□ 1.58
MRPL28-205ENST00000447696 STK33Q9BYT3 514 aa24.95■■□□□ 1.58
MRPL28-205ENST00000447696 VPS16Q9H269 839 aa24.95■■□□□ 1.58
MRPL28-205ENST00000447696 PCDHGA5Q9Y5G8 931 aa24.95■■□□□ 1.58
MRPL28-205ENST00000447696 RHOBTB1O94844 696 aa24.94■■□□□ 1.58
MRPL28-205ENST00000447696 CYP11B1P15538 503 aa24.94■■□□□ 1.58
MRPL28-205ENST00000447696 GEN1Q17RS7 908 aa24.94■■□□□ 1.58
MRPL28-205ENST00000447696 EFHC1Q5JVL4 640 aa24.94■■□□□ 1.58
MRPL28-205ENST00000447696 SYPL2Q5VXT5 272 aa24.94■■□□□ 1.58
MRPL28-205ENST00000447696 RNF43Q68DV7 783 aa24.94■■□□□ 1.58
MRPL28-205ENST00000447696 IPO4Q8TEX9 1081 aaKnown RBP24.94■■□□□ 1.58
MRPL28-205ENST00000447696 ACOX2Q99424 681 aa24.94■■□□□ 1.58
MRPL28-205ENST00000447696 DUSP15Q9H1R2 295 aaPredicted RBP24.94■■□□□ 1.58
MRPL28-205ENST00000447696 BCCIPQ9P287 314 aaKnown RBP eCLIP24.94■■□□□ 1.58
MRPL28-205ENST00000447696 TJP2Q9UDY2 1190 aa24.94■■□□□ 1.58
MRPL28-205ENST00000447696 SPAG17Q6Q759 2223 aa24.93■■□□□ 1.58
MRPL28-205ENST00000447696 A0A1W2PQF6 199 aa24.93■■□□□ 1.58
MRPL28-205ENST00000447696 F8VZ95 297 aa24.93■■□□□ 1.58
MRPL28-205ENST00000447696 TSPAN3O60637 253 aa24.93■■□□□ 1.58
MRPL28-205ENST00000447696 HSF2BPO75031 334 aa24.93■■□□□ 1.58
MRPL28-205ENST00000447696 IGLV3-25P01717 112 aa24.93■■□□□ 1.58
MRPL28-205ENST00000447696 CDH5P33151 784 aaPredicted RBP24.93■■□□□ 1.58
MRPL28-205ENST00000447696 BYSLQ13895 437 aaKnown RBP24.93■■□□□ 1.58
MRPL28-205ENST00000447696 FAM133BQ5BKY9 247 aaKnown RBP24.93■■□□□ 1.58
MRPL28-205ENST00000447696 PIK3R6Q5UE93 754 aa24.93■■□□□ 1.58
MRPL28-205ENST00000447696 ZNF557Q8N988 423 aaPredicted RBP24.93■■□□□ 1.58
MRPL28-205ENST00000447696 TMEM35BQ8NCS4 154 aa24.93■■□□□ 1.58
MRPL28-205ENST00000447696 HMGB4Q8WW32 186 aa24.93■■□□□ 1.58
MRPL28-205ENST00000447696 SLC2A13Q96QE2 648 aa24.93■■□□□ 1.58
MRPL28-205ENST00000447696 GANQ9H2C0 597 aa24.93■■□□□ 1.58
MRPL28-205ENST00000447696 CD248Q9HCU0 757 aa24.93■■□□□ 1.58
MRPL28-205ENST00000447696 TMEM63CQ9P1W3 806 aa24.93■■□□□ 1.58
MRPL28-205ENST00000447696 THAP10Q9P2Z0 257 aaPredicted RBP24.93■■□□□ 1.58
MRPL28-205ENST00000447696 LIMA1Q9UHB6 759 aaKnown RBP24.93■■□□□ 1.58
MRPL28-205ENST00000447696 CLEC4EQ9ULY5 219 aa24.93■■□□□ 1.58
MRPL28-205ENST00000447696 MYO18AQ92614 2054 aaKnown RBP24.93■■□□□ 1.58
MRPL28-205ENST00000447696 DCLK1O15075 740 aa24.92■■□□□ 1.58
MRPL28-205ENST00000447696 TIMM44O43615 452 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms