RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 PAFAH2Q99487 392 aa20.17■□□□□ 0.82
FAM3A-215ENST00000447601 STARD7Q9NQZ5 370 aa20.17■□□□□ 0.82
FAM3A-215ENST00000447601 MFHAS1Q9Y4C4 1052 aa20.17■□□□□ 0.82
FAM3A-215ENST00000447601 A0A0A0MRY4 1105 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 A0A1W2PQ45 241 aaPredicted RBP20.16■□□□□ 0.82
FAM3A-215ENST00000447601 A0A1W2PQY0 241 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 KBTBD13C9JR72 458 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 METTL18O95568 372 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 INHAP05111 366 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 VIMP08670 466 aaKnown RBP20.16■□□□□ 0.82
FAM3A-215ENST00000447601 FDFT1P37268 417 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 MSH2P43246 934 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 HCAR3P49019 387 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 SLC18A1P54219 525 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 YWHAGP61981 247 aaKnown RBP eCLIP20.16■□□□□ 0.82
FAM3A-215ENST00000447601 SEMA5AQ13591 1074 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 MPP2Q14168 576 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 PRKD1Q15139 912 aaPredicted RBP20.16■□□□□ 0.82
FAM3A-215ENST00000447601 IGDCC3Q8IVU1 814 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 LRRC34Q8IZ02 419 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 CKAP2Q8WWK9 683 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 SPATA13Q96N96 652 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 COLEC11Q9BWP8 271 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 CREBZFQ9NS37 354 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 TMLHEQ9NVH6 421 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.16■□□□□ 0.82
FAM3A-215ENST00000447601 RAD54BQ9Y620 910 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 ITGB1P05556 798 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 VAV1P15498 845 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 STX2P32856 288 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 GLUD2P49448 558 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 CORO7P57737 925 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 FAM189BP81408 668 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 YWHAHQ04917 246 aaPredicted RBP20.16■□□□□ 0.82
FAM3A-215ENST00000447601 SEMA3BQ13214 749 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 MBTPS1Q14703 1052 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 EFTUD2Q15029 972 aaKnown RBP eCLIP20.16■□□□□ 0.821e-5■■■□□ 16.7
FAM3A-215ENST00000447601 NOMO2Q5JPE7 1267 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 LHX8Q68G74 356 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 C4orf50Q6ZRC1 276 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 BEND5Q7L4P6 421 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 RTN4RL1Q86UN2 441 aaPredicted RBP20.16■□□□□ 0.82
FAM3A-215ENST00000447601 CAND1Q86VP6 1230 aaKnown RBP20.16■□□□□ 0.82
FAM3A-215ENST00000447601 CCDC33Q8N5R6 958 aa20.16■□□□□ 0.82
FAM3A-215ENST00000447601 MRRFQ96E11 262 aaKnown RBP20.16■□□□□ 0.82
FAM3A-215ENST00000447601 HMX1Q9NP08 348 aaPredicted RBP20.16■□□□□ 0.82
FAM3A-215ENST00000447601 DCLK1O15075 740 aa20.15■□□□□ 0.82
FAM3A-215ENST00000447601 OPHN1O60890 802 aa20.15■□□□□ 0.82
FAM3A-215ENST00000447601 AVILO75366 819 aa20.15■□□□□ 0.82
FAM3A-215ENST00000447601 TPI1P60174 286 aa20.15■□□□□ 0.82
FAM3A-215ENST00000447601 SARNPP82979 210 aaKnown RBP20.15■□□□□ 0.82
FAM3A-215ENST00000447601 DSC1Q08554 894 aa20.15■□□□□ 0.82
FAM3A-215ENST00000447601 BSPRYQ5W0U4 402 aa20.15■□□□□ 0.82
FAM3A-215ENST00000447601 LRRTM3Q86VH5 581 aa20.15■□□□□ 0.82
FAM3A-215ENST00000447601 SPATA2LQ8IUW3 424 aaPredicted RBP20.15■□□□□ 0.82
FAM3A-215ENST00000447601 EDEM1Q92611 657 aa20.15■□□□□ 0.82
FAM3A-215ENST00000447601 CABS1Q96KC9 395 aa20.15■□□□□ 0.82
FAM3A-215ENST00000447601 TMEM209Q96SK2 561 aa20.15■□□□□ 0.82
FAM3A-215ENST00000447601 LGMNQ99538 433 aa20.15■□□□□ 0.82
FAM3A-215ENST00000447601 FTHL17Q9BXU8 183 aa20.15■□□□□ 0.82
FAM3A-215ENST00000447601 XAB2Q9HCS7 855 aaKnown RBP20.15■□□□□ 0.82
FAM3A-215ENST00000447601 SSU72Q9NP77 194 aaKnown RBP20.15■□□□□ 0.82
FAM3A-215ENST00000447601 SAMD15Q9P1V8 674 aa20.15■□□□□ 0.82
FAM3A-215ENST00000447601 KANSL3Q9P2N6 904 aa20.15■□□□□ 0.82
FAM3A-215ENST00000447601 TCRBV9S1A1TA0A576 114 aa20.14■□□□□ 0.81
FAM3A-215ENST00000447601 TMEM189-UBE2V1I3L0A0 370 aa20.14■□□□□ 0.81
FAM3A-215ENST00000447601 MYO1CO00159 1063 aa20.14■□□□□ 0.81
FAM3A-215ENST00000447601 GSTA2P09210 222 aa20.14■□□□□ 0.81
FAM3A-215ENST00000447601 CXCR3P49682 368 aa20.14■□□□□ 0.81
FAM3A-215ENST00000447601 CDK16Q00536 496 aa20.14■□□□□ 0.81
FAM3A-215ENST00000447601 IL9RQ01113 521 aa20.14■□□□□ 0.81
FAM3A-215ENST00000447601 AP1B1Q10567 949 aa20.14■□□□□ 0.81
FAM3A-215ENST00000447601 ANKRD20A2Q5SQ80 823 aa20.14■□□□□ 0.81
FAM3A-215ENST00000447601 ANKRD20A1Q5TYW2 823 aa20.14■□□□□ 0.81
FAM3A-215ENST00000447601 ANKRD20A3Q5VUR7 823 aa20.14■□□□□ 0.81
FAM3A-215ENST00000447601 C6orf89Q6UWU4 347 aa20.14■□□□□ 0.81
FAM3A-215ENST00000447601 CTU1Q7Z7A3 348 aaKnown RBP20.14■□□□□ 0.81
FAM3A-215ENST00000447601 SLAIN1Q8ND83 568 aa20.14■□□□□ 0.81
FAM3A-215ENST00000447601 DCAKDQ8WVC6 231 aa20.14■□□□□ 0.81
FAM3A-215ENST00000447601 LINC01599Q8WXQ3 324 aa20.14■□□□□ 0.81
FAM3A-215ENST00000447601 WDCPQ9H6R7 721 aa20.14■□□□□ 0.81
FAM3A-215ENST00000447601 ZC3H7BQ9UGR2 993 aaKnown RBP20.14■□□□□ 0.81
FAM3A-215ENST00000447601 IKBKGQ9Y6K9 419 aa20.14■□□□□ 0.81
FAM3A-215ENST00000447601 GBP2P32456 591 aaPredicted RBP20.13■□□□□ 0.81
FAM3A-215ENST00000447601 MAGEA3P43357 314 aa20.13■□□□□ 0.81
FAM3A-215ENST00000447601 CLLU1OSQ5K130 101 aa20.13■□□□□ 0.81
FAM3A-215ENST00000447601 CCDC197Q8NCU1 140 aa20.13■□□□□ 0.81
FAM3A-215ENST00000447601 CCNYQ8ND76 341 aa20.13■□□□□ 0.81
FAM3A-215ENST00000447601 GDAP1Q8TB36 358 aa20.13■□□□□ 0.81
FAM3A-215ENST00000447601 P2RY11Q96G91 374 aa20.13■□□□□ 0.81
FAM3A-215ENST00000447601 MLXIPLQ9NP71 852 aa20.13■□□□□ 0.81
FAM3A-215ENST00000447601 F8W810 466 aa20.13■□□□□ 0.81
FAM3A-215ENST00000447601 FAM72CH0Y354 149 aa20.13■□□□□ 0.81
FAM3A-215ENST00000447601 RNF103O00237 685 aa20.13■□□□□ 0.81
FAM3A-215ENST00000447601 NCAM2O15394 837 aa20.13■□□□□ 0.81
FAM3A-215ENST00000447601 DDHD2O94830 711 aa20.13■□□□□ 0.81
FAM3A-215ENST00000447601 CPP00450 1065 aa20.13■□□□□ 0.81
FAM3A-215ENST00000447601 ERCC2P18074 760 aa20.13■□□□□ 0.81
FAM3A-215ENST00000447601 IFT88Q13099 833 aa20.13■□□□□ 0.81
FAM3A-215ENST00000447601 FAM72AQ5TYM5 149 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms