RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 PAPSS2O95340 614 aaPredicted RBP15.42■□□□□ 0.06
HDAC4-204ENST00000446876 KLF8O95600 359 aaPredicted RBP15.42■□□□□ 0.06
HDAC4-204ENST00000446876 CAVIN2O95810 425 aa15.42■□□□□ 0.06
HDAC4-204ENST00000446876 LATS1O95835 1130 aa15.42■□□□□ 0.06
HDAC4-204ENST00000446876 GLI1P08151 1106 aa15.42■□□□□ 0.06
HDAC4-204ENST00000446876 TFE3P19532 575 aaPredicted RBP15.42■□□□□ 0.06
HDAC4-204ENST00000446876 KIR2DL1P43626 348 aaPredicted RBP15.42■□□□□ 0.06
HDAC4-204ENST00000446876 GABRB2P47870 512 aa15.42■□□□□ 0.06
HDAC4-204ENST00000446876 MRE11P49959 708 aa15.42■□□□□ 0.06
HDAC4-204ENST00000446876 SNX16P57768 344 aa15.42■□□□□ 0.06
HDAC4-204ENST00000446876 CDK17Q00537 523 aa15.42■□□□□ 0.06
HDAC4-204ENST00000446876 RING1Q06587 406 aa15.42■□□□□ 0.06
HDAC4-204ENST00000446876 NNTQ13423 1086 aa15.42■□□□□ 0.06
HDAC4-204ENST00000446876 DMC1Q14565 340 aa15.42■□□□□ 0.06
HDAC4-204ENST00000446876 PPP2R5DQ14738 602 aa15.42■□□□□ 0.06
HDAC4-204ENST00000446876 ADGRF1Q5T601 910 aa15.42■□□□□ 0.06
HDAC4-204ENST00000446876 FAM102AQ5T9C2 384 aaPredicted RBP15.42■□□□□ 0.06
HDAC4-204ENST00000446876 OTUD1Q5VV17 481 aaPredicted RBP15.42■□□□□ 0.06
HDAC4-204ENST00000446876 E4F1Q66K89 784 aaPredicted RBP15.42■□□□□ 0.06
HDAC4-204ENST00000446876 UNC45BQ8IWX7 931 aa15.42■□□□□ 0.06
HDAC4-204ENST00000446876 ACDQ96AP0 544 aa15.42■□□□□ 0.06
HDAC4-204ENST00000446876 C11orf70Q9BRQ4 267 aa15.42■□□□□ 0.06
HDAC4-204ENST00000446876 ADAM33Q9BZ11 813 aa15.42■□□□□ 0.06
HDAC4-204ENST00000446876 NUCKS1Q9H1E3 243 aaKnown RBP15.42■□□□□ 0.06
HDAC4-204ENST00000446876 SEPT11Q9NVA2 429 aaKnown RBP15.42■□□□□ 0.06
HDAC4-204ENST00000446876 DDIT4Q9NX09 232 aa15.42■□□□□ 0.06
HDAC4-204ENST00000446876 CALCOCO1Q9P1Z2 691 aa15.42■□□□□ 0.06
HDAC4-204ENST00000446876 STOML2Q9UJZ1 356 aa15.42■□□□□ 0.06
HDAC4-204ENST00000446876 SLC8A2Q9UPR5 921 aa15.42■□□□□ 0.06
HDAC4-204ENST00000446876 DMDP11532 3685 aa15.41■□□□□ 0.06
HDAC4-204ENST00000446876 A0A0A0MRY4 1105 aa15.41■□□□□ 0.06
HDAC4-204ENST00000446876 GJB6O95452 261 aa15.41■□□□□ 0.06
HDAC4-204ENST00000446876 CYBBP04839 570 aa15.41■□□□□ 0.06
HDAC4-204ENST00000446876 HNRNPLP14866 589 aaKnown RBP eCLIP15.41■□□□□ 0.062e-10■■□□□ 13.2
HDAC4-204ENST00000446876 HOXD9P28356 352 aaPredicted RBP15.41■□□□□ 0.06
HDAC4-204ENST00000446876 TNFRSF4P43489 277 aa15.41■□□□□ 0.06
HDAC4-204ENST00000446876 SLC11A2P49281 568 aa15.41■□□□□ 0.06
HDAC4-204ENST00000446876 UBASH3AP57075 661 aa15.41■□□□□ 0.06
HDAC4-204ENST00000446876 SRSF5Q13243 272 aaKnown RBP15.41■□□□□ 0.06
HDAC4-204ENST00000446876 EGFLAMQ63HQ2 1017 aa15.41■□□□□ 0.06
HDAC4-204ENST00000446876 TRNP1Q6NT89 227 aa15.41■□□□□ 0.06
HDAC4-204ENST00000446876 ZC3H14Q6PJT7 736 aaKnown RBP15.41■□□□□ 0.06
HDAC4-204ENST00000446876 SYT13Q7L8C5 426 aa15.41■□□□□ 0.06
HDAC4-204ENST00000446876 ASCL5Q7RTU5 278 aa15.41■□□□□ 0.06
HDAC4-204ENST00000446876 IL17RCQ8NAC3 791 aa15.41■□□□□ 0.06
HDAC4-204ENST00000446876 TXNDC5Q8NBS9 432 aaKnown RBP15.41■□□□□ 0.06
HDAC4-204ENST00000446876 ZBTB44Q8NCP5 570 aa15.41■□□□□ 0.06
HDAC4-204ENST00000446876 ZNF397Q8NF99 534 aaPredicted RBP15.41■□□□□ 0.06
HDAC4-204ENST00000446876 OLIG1Q8TAK6 271 aa15.41■□□□□ 0.06
HDAC4-204ENST00000446876 ERLEC1Q96DZ1 483 aa15.41■□□□□ 0.06
HDAC4-204ENST00000446876 PRICKLE1Q96MT3 831 aaPredicted RBP15.41■□□□□ 0.06
HDAC4-204ENST00000446876 AGPAT1Q99943 283 aa15.41■□□□□ 0.06
HDAC4-204ENST00000446876 TTYH3Q9C0H2 523 aa15.41■□□□□ 0.06
HDAC4-204ENST00000446876 TSPY26PQ9H489 355 aa15.41■□□□□ 0.06
HDAC4-204ENST00000446876 IFNKQ9P0W0 207 aa15.41■□□□□ 0.06
HDAC4-204ENST00000446876 FBXO10Q9UK96 956 aa15.41■□□□□ 0.06
HDAC4-204ENST00000446876 PCDHGA2Q9Y5H1 932 aa15.41■□□□□ 0.06
HDAC4-204ENST00000446876 VPS13AQ96RL7 3174 aa15.4■□□□□ 0.06
HDAC4-204ENST00000446876 PROB1E7EW31 1015 aa15.4■□□□□ 0.06
HDAC4-204ENST00000446876 SGK1O00141 431 aa15.4■□□□□ 0.06
HDAC4-204ENST00000446876 APOEP02649 317 aa15.4■□□□□ 0.06
HDAC4-204ENST00000446876 UNGP13051 313 aaPredicted RBP15.4■□□□□ 0.06
HDAC4-204ENST00000446876 FERP16591 822 aa15.4■□□□□ 0.06
HDAC4-204ENST00000446876 MMP8P22894 467 aa15.4■□□□□ 0.06
HDAC4-204ENST00000446876 FLT3P36888 993 aa15.4■□□□□ 0.06
HDAC4-204ENST00000446876 PBX1P40424 430 aa15.4■□□□□ 0.06
HDAC4-204ENST00000446876 WASP42768 502 aa15.4■□□□□ 0.06
HDAC4-204ENST00000446876 SULT1E1P49888 294 aa15.4■□□□□ 0.06
HDAC4-204ENST00000446876 MRPS21P82921 87 aaKnown RBP15.4■□□□□ 0.06
HDAC4-204ENST00000446876 NME3Q13232 169 aa15.4■□□□□ 0.06
HDAC4-204ENST00000446876 EIF4EBP2Q13542 120 aaPredicted RBP15.4■□□□□ 0.06
HDAC4-204ENST00000446876 GEN1Q17RS7 908 aa15.4■□□□□ 0.06
HDAC4-204ENST00000446876 CLEC16AQ2KHT3 1053 aa15.4■□□□□ 0.06
HDAC4-204ENST00000446876 MPPE1Q53F39 396 aa15.4■□□□□ 0.06
HDAC4-204ENST00000446876 PIK3R6Q5UE93 754 aa15.4■□□□□ 0.06
HDAC4-204ENST00000446876 LRSAM1Q6UWE0 723 aa15.4■□□□□ 0.06
HDAC4-204ENST00000446876 TRIM72Q6ZMU5 477 aa15.4■□□□□ 0.06
HDAC4-204ENST00000446876 IRF2BP2Q7Z5L9 587 aa15.4■□□□□ 0.06
HDAC4-204ENST00000446876 ZDHHC17Q8IUH5 632 aa15.4■□□□□ 0.06
HDAC4-204ENST00000446876 ZNF513Q8N8E2 541 aaPredicted RBP15.4■□□□□ 0.06
HDAC4-204ENST00000446876 MSANTD4Q8NCY6 345 aa15.4■□□□□ 0.06
HDAC4-204ENST00000446876 RNF214Q8ND24 703 aa15.4■□□□□ 0.06
HDAC4-204ENST00000446876 WFDC5Q8TCV5 224 aa15.4■□□□□ 0.06
HDAC4-204ENST00000446876 ATRIPQ8WXE1 791 aa15.4■□□□□ 0.06
HDAC4-204ENST00000446876 NKD2Q969F2 451 aaPredicted RBP15.4■□□□□ 0.06
HDAC4-204ENST00000446876 TMA16Q96EY4 203 aaKnown RBP15.4■□□□□ 0.06
HDAC4-204ENST00000446876 ACOX2Q99424 681 aa15.4■□□□□ 0.06
HDAC4-204ENST00000446876 METTL5Q9NRN9 209 aaKnown RBP15.4■□□□□ 0.06
HDAC4-204ENST00000446876 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.4■□□□□ 0.06
HDAC4-204ENST00000446876 STIM2Q9P246 746 aa15.4■□□□□ 0.06
HDAC4-204ENST00000446876 MMP17Q9ULZ9 603 aa15.4■□□□□ 0.06
HDAC4-204ENST00000446876 PRR23AA6NEV1 266 aa15.39■□□□□ 0.05
HDAC4-204ENST00000446876 M0QYT0 321 aa15.39■□□□□ 0.05
HDAC4-204ENST00000446876 TBL1XO60907 577 aa15.39■□□□□ 0.05
HDAC4-204ENST00000446876 LILRB5O75023 590 aa15.39■□□□□ 0.05
HDAC4-204ENST00000446876 ADAM23O75077 832 aa15.39■□□□□ 0.05
HDAC4-204ENST00000446876 NOS2P35228 1153 aa15.39■□□□□ 0.05
HDAC4-204ENST00000446876 MATKP42679 507 aa15.39■□□□□ 0.05
HDAC4-204ENST00000446876 RPS24P62847 133 aaKnown RBP15.39■□□□□ 0.05
HDAC4-204ENST00000446876 CENPCQ03188 943 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms