RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	TMEM198	Q66K66	360 aa		12.93	□□□□□ -0.34
DDR1-238	ENST00000446312	RNF111	Q6ZNA4	994 aa		12.93	□□□□□ -0.34
DDR1-238	ENST00000446312	ADGRF2	Q8IZF7	708 aa		12.93	□□□□□ -0.34
DDR1-238	ENST00000446312	PLD5	Q8N7P1	536 aa		12.93	□□□□□ -0.34
DDR1-238	ENST00000446312	PPP4R1	Q8TF05	950 aa		12.93	□□□□□ -0.34
DDR1-238	ENST00000446312	ANKRD36BP1	Q96IX9	119 aa		12.93	□□□□□ -0.34
DDR1-238	ENST00000446312	STX18	Q9P2W9	335 aa	Known RBP	12.93	□□□□□ -0.34
DDR1-238	ENST00000446312	TMEM98	Q9Y2Y6	226 aa		12.93	□□□□□ -0.34
DDR1-238	ENST00000446312	TRIM43B	A6NCK2	446 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	ZC3H11A	O75152	810 aa	Known RBP eCLIP	12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	RFPL1	O75677	317 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	ENO3	P13929	434 aa	Predicted RBP	12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	YWHAE	P62258	255 aa	Known RBP	12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	EN1	Q05925	392 aa	Predicted RBP	12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	PTPN11	Q06124	597 aa	Predicted RBP	12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	LBR	Q14739	615 aa	Known RBP	12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	LAYN	Q6UX15	382 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	RPS27L	Q71UM5	84 aa	Known RBP	12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	TMPRSS6	Q8IU80	811 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	MAP7D3	Q8IWC1	876 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	PQLC3	Q8N755	202 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	PCDH19	Q8TAB3	1148 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	SEMA6A	Q9H2E6	1030 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	TXNDC16	Q9P2K2	825 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	TAGLN3	Q9UI15	199 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	TSPAN16	Q9UKR8	245 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	WDR37	Q9Y2I8	494 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	HBS1L	Q9Y450	684 aa	Known RBP	12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	SNX9	Q9Y5X1	595 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	TEX264	Q9Y6I9	313 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	GREB1L	Q9C091	1923 aa	Predicted RBP	12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	APOC4-APOC2	K7ER74	178 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	GPR25	O00155	361 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	PAPSS1	O43252	624 aa	Predicted RBP	12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	APOC2	P02655	101 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	IQCF3	P0C7M6	154 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	RPL10	P27635	214 aa	Known RBP	12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	TYK2	P29597	1187 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	ARRB2	P32121	409 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	AP2B1	P63010	937 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	PITX1	P78337	314 aa	Predicted RBP	12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	MRPS22	P82650	360 aa	Known RBP	12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	SLC10A2	Q12908	348 aa	Predicted RBP	12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	SLFN12L	Q6IEE8	588 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	KCNT2	Q6UVM3	1135 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	APLF	Q8IW19	511 aa	Predicted RBP	12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	BRSK2	Q8IWQ3	736 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	C1orf127	Q8N9H9	656 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	ZNF778	Q96MU6	729 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	PCYT2	Q99447	389 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	SNRNP25	Q9BV90	132 aa	Known RBP	12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	RPF1	Q9H9Y2	349 aa	Known RBP	12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	TUBGCP4	Q9UGJ1	667 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	ANGPTL2	Q9UKU9	493 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	APOBEC2	Q9Y235	224 aa	Known RBP	12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	NRXN2	Q9P2S2	1712 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	SLX4	Q8IY92	1834 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	HMX2	A2RU54	273 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	KRT38	O76015	456 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	NME3	Q13232	169 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	GOLGA7B	Q2TAP0	167 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	CNPY1	Q3B7I2	92 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	GRAMD4	Q6IC98	578 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	PMF1	Q6P1K2	205 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	SLC4A11	Q8NBS3	891 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	USP33	Q8TEY7	942 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	MRPL4	Q9BYD3	311 aa	Known RBP	12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	WWP1	Q9H0M0	922 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	HACL1	Q9UJ83	578 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	AKT3	Q9Y243	479 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	QSER1	Q2KHR3	1735 aa		12.92	□□□□□ -0.34
DDR1-238	ENST00000446312	BRWD3	Q6RI45	1802 aa		12.91	□□□□□ -0.34
DDR1-238	ENST00000446312	MAGEA13P	A6NCF6	341 aa		12.91	□□□□□ -0.34
DDR1-238	ENST00000446312	CYP3A5	P20815	502 aa		12.91	□□□□□ -0.34
DDR1-238	ENST00000446312	SLC1A6	P48664	564 aa		12.91	□□□□□ -0.34
DDR1-238	ENST00000446312	ATF7IP2	Q5U623	682 aa		12.91	□□□□□ -0.34
DDR1-238	ENST00000446312	FBXO16	Q8IX29	292 aa	Predicted RBP	12.91	□□□□□ -0.34
DDR1-238	ENST00000446312	LIN28A	Q9H9Z2	209 aa	Known RBP	12.91	□□□□□ -0.34
DDR1-238	ENST00000446312	PLAC1	Q9HBJ0	212 aa		12.91	□□□□□ -0.34
DDR1-238	ENST00000446312	KLK14	Q9P0G3	267 aa		12.91	□□□□□ -0.34
DDR1-238	ENST00000446312	TMEM216	Q9P0N5	145 aa		12.91	□□□□□ -0.34
DDR1-238	ENST00000446312	SIX4	Q9UIU6	781 aa		12.91	□□□□□ -0.34
DDR1-238	ENST00000446312	SLC15A5	A6NIM6	579 aa		12.91	□□□□□ -0.34
DDR1-238	ENST00000446312	APOL1	O14791	398 aa		12.91	□□□□□ -0.34
DDR1-238	ENST00000446312	CSPG5	O95196	566 aa		12.91	□□□□□ -0.34
DDR1-238	ENST00000446312	ARIH2	O95376	493 aa		12.91	□□□□□ -0.34
DDR1-238	ENST00000446312	LMNA	P02545	664 aa	Known RBP	12.91	□□□□□ -0.34
DDR1-238	ENST00000446312	HOXC6	P09630	235 aa		12.91	□□□□□ -0.34
DDR1-238	ENST00000446312	GPD1	P21695	349 aa		12.91	□□□□□ -0.34
DDR1-238	ENST00000446312	NAMPT	P43490	491 aa		12.91	□□□□□ -0.34
DDR1-238	ENST00000446312	IRF9	Q00978	393 aa		12.91	□□□□□ -0.34
DDR1-238	ENST00000446312	STXBP2	Q15833	593 aa		12.91	□□□□□ -0.34
DDR1-238	ENST00000446312	FRMD7	Q6ZUT3	714 aa		12.91	□□□□□ -0.34
DDR1-238	ENST00000446312	C14orf80	Q86SX3	495 aa		12.91	□□□□□ -0.34
DDR1-238	ENST00000446312	ARHGAP24	Q8N264	748 aa		12.91	□□□□□ -0.34
DDR1-238	ENST00000446312	PLD6	Q8N2A8	252 aa	Known RBP	12.91	□□□□□ -0.34
DDR1-238	ENST00000446312	OR6B3	Q8NGW1	331 aa		12.91	□□□□□ -0.34
DDR1-238	ENST00000446312	SIKE1	Q9BRV8	207 aa		12.91	□□□□□ -0.34

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