RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 MACROD1Q9BQ69 325 aa5.04□□□□□ -1.6
HMGB1P48-201ENST00000446155 PYM1Q9BRP8 204 aaKnown RBP5.04□□□□□ -1.6
HMGB1P48-201ENST00000446155 R3HDMLQ9H3Y0 253 aa5.04□□□□□ -1.6
HMGB1P48-201ENST00000446155 RIC8AQ9NPQ8 531 aa5.04□□□□□ -1.6
HMGB1P48-201ENST00000446155 HELLSQ9NRZ9 838 aa5.04□□□□□ -1.6
HMGB1P48-201ENST00000446155 GAR1Q9NY12 217 aaKnown RBP5.04□□□□□ -1.6
HMGB1P48-201ENST00000446155 ASIC5Q9NY37 505 aa5.04□□□□□ -1.6
HMGB1P48-201ENST00000446155 CES2O00748 559 aa5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 HOXC11O43248 304 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 TMPRSS11DO60235 418 aa5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 PROP1O75360 226 aa5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 PDE8BO95263 885 aa5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 DDX58O95786 925 aaKnown RBP5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 TBX18O95935 607 aa5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 HNRNPCP07910 306 aaKnown RBP eCLIP5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 TMEM225BP0DP42 221 aa5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 APEHP13798 732 aaKnown RBP5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 PTMSP20962 102 aa5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 ADRA1DP25100 572 aa5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 CCDC96Q2M329 555 aa5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 FAM153CQ494X1 144 aa5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 GPATCH4Q5T3I0 446 aaKnown RBP5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 SPATA1Q5VX52 437 aa5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 SULT6B1Q6IMI4 303 aa5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 CEP85Q6P2H3 762 aa5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 PDXDC1Q6P996 788 aa5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 KIRREL2Q6UWL6 708 aa5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 DSTYKQ6XUX3 929 aa5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 PIK3AP1Q6ZUJ8 805 aa5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 SLC29A4Q7RTT9 530 aa5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 RASGRP3Q8IV61 690 aa5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 PNPLA1Q8N8W4 532 aa5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 SPPL3Q8TCT6 385 aa5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 RUBCNQ92622 972 aa5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 SNX18Q96RF0 628 aa5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 TP63Q9H3D4 680 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 CPNE5Q9HCH3 593 aa5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 CCNL1Q9UK58 526 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 SCAF8Q9UPN6 1271 aaKnown RBP5.03□□□□□ -1.6
HMGB1P48-201ENST00000446155 LRRC3CA6NJW4 275 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 TARM1B6A8C7 271 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 H7C1Q1 480 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 J3KTA2 159 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 ZSCAN9O15535 394 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 SUV39H1O43463 412 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 ASNA1O43681 348 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 GFPT2O94808 682 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 TNFRSF6BO95407 300 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 IGLV2-14P01704 120 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 MBPP02686 304 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 ANXA6P08133 673 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 ATP1A3P13637 1013 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 GPD1P21695 349 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 TUBP50607 506 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 DNASE1L3Q13609 305 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 ADCK5Q3MIX3 580 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 TMEM196Q5HYL7 178 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 ANKRD45Q5TZF3 282 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 FASTKD5Q7L8L6 764 aaKnown RBP5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 BCDIN3DQ7Z5W3 292 aaKnown RBP5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 AMIGO2Q86SJ2 522 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 C2CD5Q86YS7 1000 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 CPOQ8IVL8 374 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 FTSJ3Q8IY81 847 aaKnown RBP5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 OR8H2Q8N162 312 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 TERB1Q8NA31 727 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 OR1N1Q8NGS0 311 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 HERVK_113Q902F9 699 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 GRAMD1AQ96CP6 724 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 EDC3Q96F86 508 aaKnown RBP5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 PRR11Q96HE9 360 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 BARD1Q99728 777 aaKnown RBP5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 PAAF1Q9BRP4 392 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 KATNAL1Q9BW62 490 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 KRTAP4-2Q9BYR5 136 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 PLEKHA5Q9HAU0 1116 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 SNX15Q9NRS6 342 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 KIF17Q9P2E2 1029 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 MGAT4CQ9UBM8 478 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 SRP68Q9UHB9 627 aaKnown RBP5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 ZNHIT2Q9UHR6 403 aa5.02□□□□□ -1.61
HMGB1P48-201ENST00000446155 AOX1Q06278 1338 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 TCRBV5S1A1TA0A578 114 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 ANKRD18BA2A2Z9 1011 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 CTIFO43310 598 aaKnown RBP5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 TAF5LO75529 589 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 JTBO76095 146 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 SRGAP2BP0DMP2 458 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 DGKQP52824 942 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 PROK1P58294 105 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 GPC5P78333 572 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 NHLH1Q02575 133 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 TLE2Q04725 743 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 TRIM60Q495X7 471 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 CCDC30Q5VVM6 783 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 ITPRIPL1Q6GPH6 555 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 MSANTD2Q6P1R3 559 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 NAPRTQ6XQN6 538 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 TRIM72Q6ZMU5 477 aa5.01□□□□□ -1.61
HMGB1P48-201ENST00000446155 KRT77Q7Z794 578 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms