RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 DCLK2Q8N568 766 aa19.54■□□□□ 0.72
HDAC4-203ENST00000445704 TMEM35BQ8NCS4 154 aa19.54■□□□□ 0.72
HDAC4-203ENST00000445704 TSTD1Q8NFU3 115 aa19.54■□□□□ 0.72
HDAC4-203ENST00000445704 MYEOVQ96EZ4 313 aa19.54■□□□□ 0.72
HDAC4-203ENST00000445704 PCMTD1Q96MG8 357 aaPredicted RBP19.54■□□□□ 0.72
HDAC4-203ENST00000445704 ACOX2Q99424 681 aa19.54■□□□□ 0.72
HDAC4-203ENST00000445704 TRIM62Q9BVG3 475 aa19.54■□□□□ 0.72
HDAC4-203ENST00000445704 ASNSD1Q9NWL6 643 aa19.54■□□□□ 0.72
HDAC4-203ENST00000445704 SLC27A6Q9Y2P4 619 aa19.54■□□□□ 0.72
HDAC4-203ENST00000445704 STARD13Q9Y3M8 1113 aa19.54■□□□□ 0.72
HDAC4-203ENST00000445704 GPR179Q6PRD1 2367 aa19.53■□□□□ 0.72
HDAC4-203ENST00000445704 SMTNL1A8MU46 457 aa19.53■□□□□ 0.72
HDAC4-203ENST00000445704 AXIN1O15169 862 aa19.53■□□□□ 0.72
HDAC4-203ENST00000445704 TEX33O43247 280 aa19.53■□□□□ 0.72
HDAC4-203ENST00000445704 ACSL4O60488 711 aa19.53■□□□□ 0.72
HDAC4-203ENST00000445704 TRUB2O95900 331 aaKnown RBP19.53■□□□□ 0.72
HDAC4-203ENST00000445704 GLI1P08151 1106 aa19.53■□□□□ 0.72
HDAC4-203ENST00000445704 CHRNB2P17787 502 aa19.53■□□□□ 0.72
HDAC4-203ENST00000445704 CNR2P34972 360 aa19.53■□□□□ 0.72
HDAC4-203ENST00000445704 WASP42768 502 aa19.53■□□□□ 0.72
HDAC4-203ENST00000445704 EIF4EBP2Q13542 120 aaPredicted RBP19.53■□□□□ 0.72
HDAC4-203ENST00000445704 SIM2Q14190 667 aaPredicted RBP19.53■□□□□ 0.72
HDAC4-203ENST00000445704 MPPE1Q53F39 396 aa19.53■□□□□ 0.72
HDAC4-203ENST00000445704 DCAF6Q58WW2 860 aa19.53■□□□□ 0.72
HDAC4-203ENST00000445704 EFHC1Q5JVL4 640 aa19.53■□□□□ 0.72
HDAC4-203ENST00000445704 EOGTQ5NDL2 527 aa19.53■□□□□ 0.72
HDAC4-203ENST00000445704 PRR23BQ6ZRT6 265 aa19.53■□□□□ 0.72
HDAC4-203ENST00000445704 NUDT18Q6ZVK8 323 aa19.53■□□□□ 0.72
HDAC4-203ENST00000445704 NEK11Q8NG66 645 aa19.53■□□□□ 0.72
HDAC4-203ENST00000445704 IPO4Q8TEX9 1081 aaKnown RBP19.53■□□□□ 0.72
HDAC4-203ENST00000445704 PRICKLE1Q96MT3 831 aaPredicted RBP19.53■□□□□ 0.72
HDAC4-203ENST00000445704 SPAG5Q96R06 1193 aa19.53■□□□□ 0.72
HDAC4-203ENST00000445704 EBF1Q9UH73 591 aa19.53■□□□□ 0.72
HDAC4-203ENST00000445704 XPO7Q9UIA9 1087 aaKnown RBP19.53■□□□□ 0.72
HDAC4-203ENST00000445704 DAAM1Q9Y4D1 1078 aa19.53■□□□□ 0.72
HDAC4-203ENST00000445704 HSF2BPO75031 334 aa19.52■□□□□ 0.72
HDAC4-203ENST00000445704 SLC11A2P49281 568 aa19.52■□□□□ 0.72
HDAC4-203ENST00000445704 NOMO3P69849 1222 aa19.52■□□□□ 0.72
HDAC4-203ENST00000445704 SLC6A3Q01959 620 aa19.52■□□□□ 0.72
HDAC4-203ENST00000445704 C2CD6Q53TS8 623 aa19.52■□□□□ 0.72
HDAC4-203ENST00000445704 PIK3R6Q5UE93 754 aa19.52■□□□□ 0.72
HDAC4-203ENST00000445704 ANO7Q6IWH7 933 aa19.52■□□□□ 0.72
HDAC4-203ENST00000445704 SLC26A9Q7LBE3 791 aa19.52■□□□□ 0.72
HDAC4-203ENST00000445704 RASSF3Q86WH2 238 aa19.52■□□□□ 0.72
HDAC4-203ENST00000445704 MDGA1Q8NFP4 955 aa19.52■□□□□ 0.72
HDAC4-203ENST00000445704 KCNV2Q8TDN2 545 aa19.52■□□□□ 0.72
HDAC4-203ENST00000445704 GAB3Q8WWW8 586 aa19.52■□□□□ 0.72
HDAC4-203ENST00000445704 RUBCNQ92622 972 aa19.52■□□□□ 0.72
HDAC4-203ENST00000445704 AZIN2Q96A70 460 aa19.52■□□□□ 0.72
HDAC4-203ENST00000445704 TPSD1Q9BZJ3 242 aa19.52■□□□□ 0.72
HDAC4-203ENST00000445704 SYNCQ9H7C4 482 aa19.52■□□□□ 0.72
HDAC4-203ENST00000445704 OTOGLQ3ZCN5 2332 aa19.51■□□□□ 0.71
HDAC4-203ENST00000445704 DAB1O75553 588 aa19.51■□□□□ 0.71
HDAC4-203ENST00000445704 LSM8O95777 96 aaKnown RBP19.51■□□□□ 0.71
HDAC4-203ENST00000445704 MOCS2O96007 188 aaPredicted RBP19.51■□□□□ 0.71
HDAC4-203ENST00000445704 STAT1P42224 750 aa19.51■□□□□ 0.71
HDAC4-203ENST00000445704 GABRB2P47870 512 aa19.51■□□□□ 0.71
HDAC4-203ENST00000445704 DGKEP52429 567 aa19.51■□□□□ 0.71
HDAC4-203ENST00000445704 ZNF445P59923 1031 aa19.51■□□□□ 0.71
HDAC4-203ENST00000445704 FMO1Q01740 532 aa19.51■□□□□ 0.71
HDAC4-203ENST00000445704 CDR2Q01850 454 aa19.51■□□□□ 0.71
HDAC4-203ENST00000445704 ZC3H12AQ5D1E8 599 aaKnown RBP19.51■□□□□ 0.71
HDAC4-203ENST00000445704 OTUD1Q5VV17 481 aaPredicted RBP19.51■□□□□ 0.71
HDAC4-203ENST00000445704 NAA35Q5VZE5 725 aa19.51■□□□□ 0.71
HDAC4-203ENST00000445704 XYLT1Q86Y38 959 aa19.51■□□□□ 0.71
HDAC4-203ENST00000445704 ZNF397Q8NF99 534 aaPredicted RBP19.51■□□□□ 0.71
HDAC4-203ENST00000445704 TMA16Q96EY4 203 aaKnown RBP19.51■□□□□ 0.71
HDAC4-203ENST00000445704 ADAM33Q9BZ11 813 aa19.51■□□□□ 0.71
HDAC4-203ENST00000445704 NUCKS1Q9H1E3 243 aaKnown RBP19.51■□□□□ 0.71
HDAC4-203ENST00000445704 FAM204AQ9H8W3 233 aa19.51■□□□□ 0.71
HDAC4-203ENST00000445704 RTN4Q9NQC3 1192 aaKnown RBP19.51■□□□□ 0.71
HDAC4-203ENST00000445704 TBL1XO60907 577 aa19.5■□□□□ 0.71
HDAC4-203ENST00000445704 RPP40O75818 363 aaKnown RBP19.5■□□□□ 0.71
HDAC4-203ENST00000445704 NTSR1P30989 418 aa19.5■□□□□ 0.71
HDAC4-203ENST00000445704 SNX16P57768 344 aa19.5■□□□□ 0.71
HDAC4-203ENST00000445704 TMEM215Q68D42 235 aa19.5■□□□□ 0.71
HDAC4-203ENST00000445704 RNF43Q68DV7 783 aa19.5■□□□□ 0.71
HDAC4-203ENST00000445704 CEP68Q76N32 757 aa19.5■□□□□ 0.71
HDAC4-203ENST00000445704 TRMT11Q7Z4G4 463 aaKnown RBP19.5■□□□□ 0.71
HDAC4-203ENST00000445704 ANKS1BQ7Z6G8 1248 aa19.5■□□□□ 0.71
HDAC4-203ENST00000445704 ERICH1Q86X53 443 aa19.5■□□□□ 0.71
HDAC4-203ENST00000445704 ZNF677Q86XU0 584 aa19.5■□□□□ 0.71
HDAC4-203ENST00000445704 ZDHHC17Q8IUH5 632 aa19.5■□□□□ 0.71
HDAC4-203ENST00000445704 WFDC5Q8TCV5 224 aa19.5■□□□□ 0.71
HDAC4-203ENST00000445704 CPA5Q8WXQ8 436 aa19.5■□□□□ 0.71
HDAC4-203ENST00000445704 HINFPQ9BQA5 517 aa19.5■□□□□ 0.71
HDAC4-203ENST00000445704 SLC2A11Q9BYW1 496 aa19.5■□□□□ 0.71
HDAC4-203ENST00000445704 CBX8Q9HC52 389 aa19.5■□□□□ 0.71
HDAC4-203ENST00000445704 CD248Q9HCU0 757 aa19.5■□□□□ 0.71
HDAC4-203ENST00000445704 DDIT4Q9NX09 232 aa19.5■□□□□ 0.71
HDAC4-203ENST00000445704 CALCOCO1Q9P1Z2 691 aa19.5■□□□□ 0.71
HDAC4-203ENST00000445704 NCDNQ9UBB6 729 aa19.5■□□□□ 0.71
HDAC4-203ENST00000445704 FAM186AA6NE01 2351 aa19.49■□□□□ 0.71
HDAC4-203ENST00000445704 MYO18AQ92614 2054 aaKnown RBP19.49■□□□□ 0.71
HDAC4-203ENST00000445704 SYNJ2BP-COX16A0A087WUM0 186 aa19.49■□□□□ 0.71
HDAC4-203ENST00000445704 A0A1W2PQF6 199 aa19.49■□□□□ 0.71
HDAC4-203ENST00000445704 TCRBV21S2A2A0A5A6 115 aa19.49■□□□□ 0.71
HDAC4-203ENST00000445704 DCLK1O15075 740 aa19.49■□□□□ 0.71
HDAC4-203ENST00000445704 APOEP02649 317 aa19.49■□□□□ 0.71
HDAC4-203ENST00000445704 CYP1A1P04798 512 aaPredicted RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms